prot_P-littoralis_Contig149.12.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig149.12.2
Unique Nameprot_P-littoralis_Contig149.12.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length224
Homology
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BLAST of mRNA_P-littoralis_Contig149.12.2 vs. uniprot
Match: A0A6H5L4Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q4_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 8.110e-39
Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 0 
Query:   54 VAESVEANKTLGVLLCADNHLSTDCLVELEYAMGRPKKSVRELVGQVQRSIDKQDSLSKGEGTRRSTSVAGPSHG-EPSVTLASGQETSIQVSFGRKDNVIGNITV 158
            +A++VEAN TLG+LLC DNHLS D L+E++YAM RPK+ VR+LVGQVQRSID Q+ LSKG  T + T VAG  HG EPSV LA GQETSIQVSFGRKDN+IG+I V
Sbjct:    1 MAQAVEANNTLGILLCQDNHLSADTLIEIDYAMARPKRPVRDLVGQVQRSIDTQNFLSKGVETGQQTKVAGVPHGGEPSVQLAPGQETSIQVSFGRKDNIIGSIPV 106
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BLAST of mRNA_P-littoralis_Contig149.12.2 vs. uniprot
Match: F0YJL1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL1_AURAN)

HSP 1 Score: 79.7 bits (195), Expect = 1.110e-13
Identity = 66/214 (30.84%), Postives = 99/214 (46.26%), Query Frame = 0 
Query:   11 LDISNNRLGAAGIEAIAIAVARNTTLLELDLSGCGGTESSFRAVAESVEANKTLGVLLCADNHLSTDCLVELEYAMGRPKKSVRELVGQVQRSIDKQDSLSKGEGTRRSTSVAGPSHGEPSVTLASGQETSIQVSFGRKDNVIGNITVTNDTSLEEARAIIGPLLRPADRTYGFLSITGG-VVPPEDEQARRVVWDCKIPVQLRPASWVAIGRA 223
            LD+S+N LGA    A+A+A A    LLEL+LSGC    ++   +  ++E N+ L  +    N      L     A  RP   +R             D L++  G                + L   Q  ++QVS+GR+ NVIGN+  +  TSL E R +I   L  AD +Y  ++  G    P  +E  R V+ DC   +QLRP++W+ +  A
Sbjct:  287 LDLSDNHLGAD--SAVALAAA----LLELNLSGCKIGCANSGMLVSAIERNEQLDFIHFGHNRGDDGALFSKIQARPRPVARLRA-----------DDMLNRLFGDAMLDQKLKNKLNTDGILLHPDQNANVQVSYGRRPNVIGNLRCSATTSLAEMRYLITKNLSLADESYLMIAHDGTRAFPRHEEDKRHVLLDCGHNLQLRPSTWLTLAPA 483
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4Q4_9PHAE8.110e-3969.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YJL1_AURAN1.110e-1330.84Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 33..60
e-value: 3.0
score: 13.8
coord: 5..32
e-value: 0.33
score: 20.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..137
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..85
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..122
e-value: 4.2E-16
score: 61.1
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 5..27
e-value: 0.0091
score: 16.0
coord: 33..45
e-value: 0.72
score: 10.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:39855..42933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.12.2mRNA_P-littoralis_Contig149.12.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig149 39794..44104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig149.12.2 ID=prot_P-littoralis_Contig149.12.2|Name=mRNA_P-littoralis_Contig149.12.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MLLSNCGLLCLDISNNRLGAAGIEAIAIAVARNTTLLELDLSGCGGTESS
FRAVAESVEANKTLGVLLCADNHLSTDCLVELEYAMGRPKKSVRELVGQV
QRSIDKQDSLSKGEGTRRSTSVAGPSHGEPSVTLASGQETSIQVSFGRKD
NVIGNITVTNDTSLEEARAIIGPLLRPADRTYGFLSITGGVVPPEDEQAR
RVVWDCKIPVQLRPASWVAIGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt