prot_P-littoralis_Contig149.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig149.10.1
Unique Nameprot_P-littoralis_Contig149.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length744
Homology
BLAST of mRNA_P-littoralis_Contig149.10.1 vs. uniprot
Match: D7FW78_ECTSI (Possible ribosome assembly protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW78_ECTSI)

HSP 1 Score: 796 bits (2056), Expect = 3.850e-272
Identity = 485/766 (63.32%), Postives = 544/766 (71.02%), Query Frame = 0
Query:    1 ERKFIIGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLVYCAREKAVLVACQARMRADGDMVCFDEMDPDKAVVLVTFEGSGSAYSEDLNNVAFSHCNGLVATSSCNPEDGILIWGFSTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLILATYSDGTIRLWGVKGSSLKGVLVLTFSNQAPKEACFWGGEEAEYPLLRLKHRSKENPPTDD-----------QDSTSETSQDPAAKTSSIDDGQGSRKDEGDATEVGGGTTIEAETEDEQTFSEWRVHPRVTPRKDIALQVISTTWDSTSACLFTGDETGRLRCWSLRKVLEALGAEPSREASTQEGQAKRLESEMEGG---GAGGWREGGGSGSRNIMRRQARSCDSGGMKASADSRRKSSLSLAVPIFHASKVSTEMVDFLWGAENAHEDSIGLVVLVSTDPPALLTSGADRCVKAWRLDGRPQGLLLQGLAPHTTNPRWSFSVNVESLAQAENAEAKTVLSAMRKRSADHRLAAQETAQAAMIPSAGPQHHXXXXXXXXXXXXXXXXXXRSAGGVSLPPAQPSPLKQAQILRQRKESTASMARATLEIGSGNDYFGXXXXXXRAMPEVEGSEGGGEDASVFPRETARHLALQAVSEGVGKYSTSDSCSDWTSSVSSA--SYSRHKDRPSVIPPSPGRRRGRPAAGLSAVVDRLGKLLDQAESFSLEHTNRFGGRRSNLSDFAKGALLADPRRITSSNT--SSASVMTI-SGTMG------GHGSNASKG-PRG 740
            ERKFI+GNAKGEVAVYNFRNGAKMKDLDTQAGPIAGL+YCAR                                                              CNPEDGILIWGF TGRQEHVLAHGKAEGLVSSVASLVFLDPHPL+LATYSDGTIRLWGVKGS LKG++VL F NQ PKEA FWGGE+AEYPLLRL   + +NPPT+            Q+   ET +D     +S  DG+G  K     +   GG T   E EDEQ FS WRVHPR+TPRKD ALQVISTTWD  SACLFTGDETGRLRCWSLRKVL ALGAE +RE++ +EGQA   E E E     G GG R+G G+ +        R+ DSG  + S +SRRKSS+SL +     ++V+  MVDFLWGAE+AHEDSIGLVVLVSTDPPALLTSGADRCVKAWRLDGRPQG+LLQGLAPH  NPRWSFSVNVE+LAQAENAEA+TVLSAM++R+A++RLAAQE A+AA  P   PQ  XXXXXXXXXXXXXXXXXX + GGVSLPPA+PSPLKQAQ+LRQRKE+TA+MARA +E GS     G      + MPE E SEGG E      RE  RH ALQA+SE +G Y  SDSCSDWTSS SS+  SY+R K RPSV+PP+PGRRRGRPAAGLSAVVDR+GKLLDQAESFS EHTNRFGGRRSNLSDFA+GALLADPRRI   +T  S+ + MT  S  +G      G GS ASK  PRG
Sbjct:  590 ERKFILGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLIYCARR-------------------------------------------------------------CNPEDGILIWGFGTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLLLATYSDGTIRLWGVKGSPLKGLMVLMFPNQPPKEALFWGGEDAEYPLLRLPPSTAKNPPTEQKLGTTGADQGGQEPIGETKEDTTTTATSEVDGRGVGKGVALGSIGQGGETPTQEEEDEQAFSTWRVHPRMTPRKDQALQVISTTWDPESACLFTGDETGRLRCWSLRKVLGALGAESTRESAAEEGQASSQECETEATESLGPGGRRDGAGAVAAGEAGSLLRTEDSGARRGSTESRRKSSVSLTMSPLSVTRVTKHMVDFLWGAESAHEDSIGLVVLVSTDPPALLTSGADRCVKAWRLDGRPQGMLLQGLAPHAPNPRWSFSVNVEALAQAENAEARTVLSAMKERAANNRLAAQEAAEAARFPDPDPQRXXXXXXXXXXXXXXXXXXXXT-GGVSLPPAEPSPLKQAQLLRQRKENTAAMARAAVEKGS--KIGGDGRSDGQPMPEAEVSEGGSEVTFTSSREVMRHAALQAMSESMGNYRKSDSCSDWTSSTSSSRSSYTRFKGRPSVVPPAPGRRRGRPAAGLSAVVDRVGKLLDQAESFSAEHTNRFGGRRSNLSDFAQGALLADPRRIPPPSTKKSADTAMTFRSAVLGETASGSGGGSQASKSEPRG 1291          
BLAST of mRNA_P-littoralis_Contig149.10.1 vs. uniprot
Match: A0A836CBJ4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.360e-29
Identity = 127/380 (33.42%), Postives = 173/380 (45.53%), Query Frame = 0
Query:  159 RLWGVKGSSLKGVLVLTFSNQAPKEACFWGGEEAEYPLLRLKHRS-----------------------------KENPPTDDQDSTSETSQDPAA--KTSSIDDGQGSRKDEGDATEVGGGTTIEAETEDEQTFSEWRVHPRVTPRKD------IALQVISTTWDSTSACLFTGDETGRLRCWSLRKVLEALGAEPSREASTQEGQAKRLESEMEGGGAGGWREGGGSGSRNIM-----RRQARSCDSGGMKASADSRRKSSL------------SLAVPI----FHASKVSTEMVDFLWGAENAH-EDSIGLVVLVSTDPPALLTSGADRCVKAWRLDGRPQGLLLQGLAPHTTNPRWSFSVNVESLAQAENAEAKTVL 479
            R+WGVKG   +G  +L + N+AP+ + FWG   AEYPLL+ +HR+                                 P     S +E  + PAA    S + + +                   AE E   T S   V   +    D      ++ QVIS  WD  +  L+TGDETGRLR WSL + L  + A P       E + + L +++             S SR ++     RR +     G   A  D R+ +S+            +L  P     +H   V T  VDF+WGAE AH ED+I LV +V T+P ALLT+GADRCVK W LDGRPQG LLQGL P   NP W F V+V++  +AE  E K ++
Sbjct: 1228 RVWGVKGHVRRGACLLDWENRAPRGSSFWGEATAEYPLLQPQHRNGAPHGGXXXXXXDARAAMRALRTAVPHACTTPGPNSHLTSIAERCRPPAAWLAQSIVTERRMXXXXXXXXXXXXXQEASRAEREAIITTS-LVVRLSLADGDDDCRGGRLSTQVISMAWDRGTNSLYTGDETGRLRRWSLNRALITMQATPV------EVKGQGLRNQL-------------SRSREVLMEHERRRSSAMAAMGPPAAVLDGRQVTSMYNLSECACMAMGTLRQPRHCCRYHV--VDTWYVDFVWGAEGAHSEDAINLVRVVPTEPRALLTTGADRCVKMWTLDGRPQGTLLQGLRPTAINPTWKFRVDVQAREEAEAEECKALM 1585          
BLAST of mRNA_P-littoralis_Contig149.10.1 vs. uniprot
Match: A0A1V9Z150_9STRA (EF-hand domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z150_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 7.560e-14
Identity = 58/191 (30.37%), Postives = 93/191 (48.69%), Query Frame = 0
Query:    2 RKFIIGNAKGEVAVYNFRNGAKMKDLD-------TQAGPIAGLVYCAREKAVLVACQARMRADGDMVCFDEMDPDKAVVLVTFEGSGSAYSEDLNNVAFSHCNGLVATSSCNPEDGILIWGFSTGR--QEHVLAH-------GKAEGLVSSVASLVFLDPHPLILATYSDGTIRLWGVKGSSLKGVLVLTF 176
            RKFI+G+ +G + V+++ NGA MK+            G ++ LVYC   ++V+ A       D  +   DE DP+  ++L    G    +S D+ ++A+S    L+A+ S +    + IW F  GR   + +  H       G   G  S +ASL FLDP+PL+    + G + LW ++ S  K   V  F
Sbjct:  520 RKFIVGDHEGNIRVFDYLNGALMKEFQYAEFGHRAHLGEVSRLVYCNEYRSVISASW-----DTTICIHDESDPEHGILLRRMAGG---HSGDITSLAYSSTLSLIASGSLDCM--VQIWDFEFGRCVPQSMTGHIIFCRLDGTCIGHTSGIASLAFLDPYPLLAVCDAVGNVCLWAMRPSKYKYRCVFRF 700          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW78_ECTSI3.850e-27263.32Possible ribosome assembly protein 4 n=1 Tax=Ectoc... [more]
A0A836CBJ4_9STRA1.360e-2933.42WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1V9Z150_9STRA7.560e-1430.37EF-hand domain-containing protein n=1 Tax=Achlya h... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 257..305
e-value: 49.0
score: 6.3
coord: 392..436
e-value: 38.0
score: 7.0
coord: 118..162
e-value: 0.83
score: 17.5
coord: 70..115
e-value: 150.0
score: 3.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..327
e-value: 8.3E-13
score: 49.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 576..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..731
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..230
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 2..438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:23302..29649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.10.1mRNA_P-littoralis_Contig149.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig149 23302..29649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig149.10.1 ID=prot_P-littoralis_Contig149.10.1|Name=mRNA_P-littoralis_Contig149.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=744bp
ERKFIIGNAKGEVAVYNFRNGAKMKDLDTQAGPIAGLVYCAREKAVLVAC
QARMRADGDMVCFDEMDPDKAVVLVTFEGSGSAYSEDLNNVAFSHCNGLV
ATSSCNPEDGILIWGFSTGRQEHVLAHGKAEGLVSSVASLVFLDPHPLIL
ATYSDGTIRLWGVKGSSLKGVLVLTFSNQAPKEACFWGGEEAEYPLLRLK
HRSKENPPTDDQDSTSETSQDPAAKTSSIDDGQGSRKDEGDATEVGGGTT
IEAETEDEQTFSEWRVHPRVTPRKDIALQVISTTWDSTSACLFTGDETGR
LRCWSLRKVLEALGAEPSREASTQEGQAKRLESEMEGGGAGGWREGGGSG
SRNIMRRQARSCDSGGMKASADSRRKSSLSLAVPIFHASKVSTEMVDFLW
GAENAHEDSIGLVVLVSTDPPALLTSGADRCVKAWRLDGRPQGLLLQGLA
PHTTNPRWSFSVNVESLAQAENAEAKTVLSAMRKRSADHRLAAQETAQAA
MIPSAGPQHHHHPRRHHHQHQHSHQRRKRSAGGVSLPPAQPSPLKQAQIL
RQRKESTASMARATLEIGSGNDYFGGGGGGGRAMPEVEGSEGGGEDASVF
PRETARHLALQAVSEGVGKYSTSDSCSDWTSSVSSASYSRHKDRPSVIPP
SPGRRRGRPAAGLSAVVDRLGKLLDQAESFSLEHTNRFGGRRSNLSDFAK
GALLADPRRITSSNTSSASVMTISGTMGGHGSNASKGPRGKIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam