mRNA_P-littoralis_Contig148.115.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A6H5KZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF3_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 3.390e-180 Identity = 306/436 (70.18%), Postives = 329/436 (75.46%), Query Frame = 2
Query: 77 TRQRAKAAAALGLAAASLCSSKHGVDAFYSSS----SSGPLAFAPPQVPQPWPTRSLASHQPASTSMSATGRARRFYVRDRCSGLNRGLGSERAA-GVPDSRAAWVGALGTRMGGTSSXXXXXXXXXKLFTASNEDAGSTSTSTSGGEAALEVEPFMPAAIQDALPEELQVELSIINRDPAKLAFALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADHDDDGMVPALATG-------EGGVSLGATPV 1348
TRQRA AAA L AAS+C +AF SSS +S LAFAP Q W + ASHQ A++S TGR RR VR+R S G G AA V + +AW + +R G S AS EDAG S+S G E EVEPFMPA +Q ALP E Q +LS IN+DPAKL F +NAAV+FLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGD TAQLFTGK LE +DL RTARSATAGLL+HGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQG P EEVWG+VKS AWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQAD + MVPA+A+G EGG LG TPV
Sbjct: 4 TRQRATRAAAAALIAASICCRHTAAEAFTSSSRSRGASNHLAFAPAHG-QSWLAQPRASHQSAASS---TGRGRRIDVRERRS---HGYGPGAAAHSVFELPSAWGRSARSRQRGRGSSTSKLS-----MMASVEDAGDASSSLEGDE---EVEPFMPAPLQGALPAEWQKKLSQINKDPAKLTFFMNAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDFTAQLFTGKTLENMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADPAEGEMVPAMASGSTMPKGDEGG--LGGTPV 422
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: D7G7V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V0_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 6.310e-167 Identity = 254/305 (83.28%), Postives = 265/305 (86.89%), Query Frame = 2
Query: 455 ASNEDAGSTSTSTSGGEAALEVEPFMPAAIQDALPEELQVELSIINRDPAKLAFALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADHDDDGMVPALATG-------EGGVSLGATPV 1348
A+ EDAG S+S G E EVEPFMPA +QDALP E Q +LS IN DPAKL F LNAAV+FLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKA TSCVAYGLGD TAQLFTGK LE +DL RTARSATAGLL+HGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQG P EEVWG+VKS AWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQAD + MVPA+A+G EGG LG PV
Sbjct: 3 AAVEDAGEASSSLKGDE---EVEPFMPAPLQDALPAEWQKKLSQINNDPAKLTFFLNAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKAFTSCVAYGLGDFTAQLFTGKTLEDMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADPAEGEMVPAMASGSAMPKGDEGG--LGGAPV 302
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A836CBY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY7_9STRA) HSP 1 Score: 294 bits (753), Expect = 1.080e-87 Identity = 140/229 (61.14%), Postives = 174/229 (75.98%), Query Frame = 2
Query: 590 NRDPAKLAFALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQG-KPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQA 1273
+ DP + LN V+ A +K+ TVD D++RGWT +E++LRVP DN + YE++V+ + + TKA TS VAYG+GD AQ G+ LETIDLKRTARSA AGL VHGP+CHFWIE MQ LDF+GAWWNF+PKV+ADQTV+S+ LNAAY++ ++ L G K E+W VK+T PA+TSSWRFWPLIHC SFS IPKD KLLFID MEIIWVTILS+VAN D++A
Sbjct: 116 SSDPKRRNAVLNLLVVGALVGGALYKVVTVDADLSRGWTIWEIILRVPSDNLWSYESSVTHNAVPTKAATSMVAYGIGDFLAQCLRGETLETIDLKRTARSAAAGLFVHGPMCHFWIEWMQANLDFNGAWWNFLPKVVADQTVYSLVLNAAYTSFVIGLSGEKKPSEIWDYVKTTCVPAITSSWRFWPLIHCLSFSTLIPKDFKLLFIDLMEIIWVTILSSVANKDQEA 344
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A7S0PIM0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0PIM0_MICPS) HSP 1 Score: 249 bits (636), Expect = 4.750e-70 Identity = 114/218 (52.29%), Postives = 154/218 (70.64%), Query Frame = 2
Query: 617 ALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQ 1270
ALN ++ A A F++ VD DI++GWT +E+L +P DN Y+ +V ++P+ TKALTS VAY LGD T QL GK + T+DLKR+ RS AG L+HGPLCH+W++ + L FDGA W KVIADQT WS+FLN+AY+T IMSLQG E + G++++T W A+T+ WRFWP +H +FS IP+D KLLF+DC+E++WVTILS N D +
Sbjct: 106 ALNVLIVGSVAFGAVFQIVEVDSDISKGWTAWEILRNIPRDNLEAYQQSVFDNPLPTKALTSGVAYTLGDFTCQLSQGKKITTVDLKRSLRSGIAGFLIHGPLCHYWLQWTEENLSFDGALWAIPVKVIADQTAWSLFLNSAYTTCIMSLQGMGPERIKGEIQATWWNAITAGWRFWPFVHTLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRDSE 323
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: C1N0U7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0U7_MICPC) HSP 1 Score: 247 bits (631), Expect = 1.920e-69 Identity = 113/230 (49.13%), Postives = 157/230 (68.26%), Query Frame = 2
Query: 581 SIINRDPAKLAFALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQ 1270
+ + ++ K+ LN A++ A A F + VD DI+ GWTWYEVL +P DN Y++ V P+ KA+TS VAY LGD T QL GK +ET+DLKR+ARS AG L+HGPLCH+W+ + L FDGAW+ K+IADQT WS+FLN+AY+T IMSLQG + ++++T + A+++ W+FWP +H +FS+ IP+D KLLF+DC+E+IWVTILS N D +
Sbjct: 91 AFLKKNSYKIDALLNIAIVGSVAGGAVFGIVEVDSDISTGWTWYEVLRNIPQDNLAAYQSAVFAHPLPVKAMTSGVAYTLGDFTCQLSQGKTIETVDLKRSARSGVAGFLIHGPLCHYWLMWTEANLSFDGAWYGTPVKIIADQTAWSLFLNSAYTTCIMSLQGFGPRRIKNEIQATWYNAISAGWKFWPFVHAFTFSSIIPQDFKLLFVDCVEVIWVTILSAAVNRDAE 320
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A7S2B582_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B582_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.370e-68 Identity = 108/191 (56.54%), Postives = 147/191 (76.96%), Query Frame = 2
Query: 716 VLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADHDDD 1288
+LLR+P D ++YEA V +P+ KA TS VAY +GD +Q++ G+ L+T+DL R+ARS TAG + HGPLCH+W++ M+TYLDF+GAWW KV+ADQTVWS++LNA YS +I SL + ++VW VK+T+WPAL +SWRFWP +HC SFS+A+P DLKLL++D MEI+WVT+LS VAN D+ A+ D
Sbjct: 132 LLLRLPSDLIHQYEALVPTNPVFYKACTSGVAYTIGDFVSQVYQGRTLKTLDLARSARSGTAGFVGHGPLCHYWMQFMETYLDFNGAWWGTGVKVLADQTVWSIYLNAMYSFLIGSLALRNPKDVWQDVKATSWPALRTSWRFWPFVHCISFSHAVPLDLKLLWVDVMEIVWVTLLSKVANDDKDANMASD 322
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A7S0SAT7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SAT7_9CHLO) HSP 1 Score: 241 bits (616), Expect = 2.160e-67 Identity = 114/237 (48.10%), Postives = 156/237 (65.82%), Query Frame = 2
Query: 557 PEELQVELSIINRDPA-KLAFALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGD 1264
PE ++ + + + A +++ +N A++ A + F++ VD DI+ GWTWYE+L +P DN Y+ V PI KALTS VAY LGD T QL GK L T+DLKR+ RS AG L+HGPLCH+W++ L F GAWW KV+ADQTVWS+FLN AY+T IMSLQG + ++ +T + A+++ WRFWP +H +FS IP+D KLLF+DC+E++WVTILS N D
Sbjct: 96 PESVKAKFNAFFEENALQISAFVNIAIVGSVAFGSFFRIVEVDSDISTGWTWYEILRNIPEDNLNAYQQAVFAHPIPVKALTSGVAYTLGDFTCQLSQGKSLPTVDLKRSLRSGVAGFLIHGPLCHYWLQWTDLNLSFGGAWWAIPVKVLADQTVWSLFLNTAYTTCIMSLQGMRPANIKREIDATWYNAISAGWRFWPFVHLLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRD 332
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A061RIB7_9CHLO (Protein Mpv17 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIB7_9CHLO) HSP 1 Score: 240 bits (613), Expect = 4.820e-67 Identity = 114/214 (53.27%), Postives = 147/214 (68.69%), Query Frame = 2
Query: 617 ALNAAVIFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVAN 1258
A+N V+ L A A +K VD D ARGWT E +LR D+F Y+ + S P +TKA TS VAY LGD AQ F G+ + T+DLKR+ RS AG +HGPLCH WIE M+ +L F GAW++ KVIADQTVWS+FLN Y++ I++LQG ++ +V+ T WPAL+S WRFWP +H SFS +P +LKLLFID MEI+WVTIL++V N
Sbjct: 102 AINGTVVALIVAGATYKAVEVDLDYARGWTLMEFMLRTARDDFVMYQHSASLHPFITKACTSGVAYSLGDFAAQTFQGRTVFTVDLKRSLRSGIAGFFIHGPLCHLWIEWMEAHLSFGGAWYSTFAKVIADQTVWSIFLNTMYTSTILALQGTRPPKIAEEVRLTWWPALSSGWRFWPFVHTVSFSPYVPAELKLLFIDTMEIVWVTILASVVN 315
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: A0A7R9W0S2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0S2_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.240e-66 Identity = 117/211 (55.45%), Postives = 147/211 (69.67%), Query Frame = 2
Query: 713 EVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADHDDDGMVPALATGEGGVSLGATP 1345
++L R+P D ++YEA V +PI KA TS VAYGLGD +Q++ GK L T+DL R RS AG LVHGPLCHFW+ M+TYLDFDGAWW KV AD TVWS+FLNAAYST+I +L G+ ++V V++T WPAL S+WRFWP +H SFS+A+P DLKLL++D ME+IWVTILS VAN D+ A +D + V GA P
Sbjct: 156 DLLARLPFDLVHKYEALVPTNPIFYKACTSGVAYGLGDFISQVYQGKTLSTLDLPRPFRSGAAGFLVHGPLCHFWLLFMETYLDFDGAWWATGIKVTADLTVWSIFLNAAYSTVIGTLAGRSPKDVLTDVRATQWPALRSAWRFWPFVHTVSFSHAVPLDLKLLWVDFMEVIWVTILSKVANEDKNAKLAEDEVERVNLLETAAVEEGAVP 366
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Match: F0Y502_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y502_AURAN) HSP 1 Score: 229 bits (584), Expect = 6.300e-66 Identity = 107/195 (54.87%), Postives = 142/195 (72.82%), Query Frame = 2
Query: 704 TWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDLTAQLFTGKDLETIDLKRTARSATAGLLVHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGKPMEEVWGQVKSTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQADHDDD 1288
T ++L R+P D+ + YEA V +PI KA TS VAY LGD +Q++ G++L+++DL R+ARS AG + HGPLCHFW+ M+ +LDFDGAW+ KV ADQTVWS++LNA YS +I S + +VW VK+T+WPAL SSWRFWP +H SFS+ +P DLKLL++D MEI+WVTILS VAN D+ A D+D
Sbjct: 1 TSLDLLARLPMDSIHSYEALVPTNPIFYKACTSGVAYTLGDFVSQIYQGRNLKSVDLARSARSGAAGFVGHGPLCHFWMVWMEAHLDFDGAWYGTGFKVFADQTVWSLYLNAMYSFLIGSFALRNPRDVWEDVKATSWPALRSSWRFWPFVHTISFSHLVPLDLKLLWVDAMEIVWVTILSKVANDDKVAKLDED 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.115.1 >prot_P-littoralis_Contig148.115.1 ID=prot_P-littoralis_Contig148.115.1|Name=mRNA_P-littoralis_Contig148.115.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=455bp MVSTTRQRAKAAAALGLAAASLCSSKHGVDAFYSSSSSGPLAFAPPQVPQback to top mRNA from alignment at P-littoralis_Contig148:419453..431497+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.115.1 ID=mRNA_P-littoralis_Contig148.115.1|Name=mRNA_P-littoralis_Contig148.115.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12045bp|location=Sequence derived from alignment at P-littoralis_Contig148:419453..431497+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:419453..431497+ >mRNA_P-littoralis_Contig148.115.1 ID=mRNA_P-littoralis_Contig148.115.1|Name=mRNA_P-littoralis_Contig148.115.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1365bp|location=Sequence derived from alignment at P-littoralis_Contig148:419453..431497+ (Pylaiella littoralis U1_48)back to top |