mRNA_P-littoralis_Contig148.89.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI) HSP 1 Score: 387 bits (995), Expect = 9.730e-134 Identity = 211/270 (78.15%), Postives = 228/270 (84.44%), Query Frame = 1
Query: 1 MMPDG-LLRGFVVPATLAFACQAWMTTTTTSTYLFVSGTLEQCHQDCAGNTTSELVADAALNGGTWSVWDTQRLVGPTEPAVDLNATYPYARAPFPLPSHSFCQLGCSFFFAGSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVDGIMSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSCLSEWQNFQRDSMPYIGR 807
M PDG LLR FVVP T A A QAW T T +++ LFVS TLEQCH DCAGNTT+ELVADAALNGG+WSVWDTQRLVGPTEPA ++NATYPYARAP PLP HSFCQLGCS+FFAGSP+NTTC GLCDDFY NVSVGINDYAEK+RLECRDGCNIAV RCQPGYSC G+MS C GTYRNTSYDMINTC + KG GV DXXXXXXXXXXXXXXXXXXXXXXXXX +A+EEGTAECSC+TE+SCL EWQNFQRDSMP+IGR
Sbjct: 1 MKPDGGLLRAFVVPTTFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.770e-33 Identity = 96/214 (44.86%), Postives = 124/214 (57.94%), Query Frame = 1
Query: 214 RLVGPTEPAVDLNATYPYARAPFPLPSHSFCQLGCSFFFAGSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVDGIMSACPSGTYRNTSYDM-------INTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSC---------LSEWQNFQRDSMPYIGR 807
RL GPT+ + +P+A A FP FCQLGC F+ P+NTTC LC+ FY + ++VG ND AE+++LEC+DGC IA++ CQ GY C +GIM CP+GTYR D+ +C + KG+ XXXXXXXXXXXXXXXXXXXXXXXXX G C C+T SC S ++ R+S+P+IGR
Sbjct: 44 RLTGPTK--MQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGR 255
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.260e-28 Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = 1
Query: 205 DTQRLVGPTEPAVDLNATYPYARAPFPLPSHSFCQLGCSFFFAGSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVDGIMSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGR 606
D R VGPT P +P+ AP P P FCQ GCS FF P T C CD Y ++V+V ND AE +RLECRDGC + + RCQ GY C G M CP GTYR+ + + C++ + +GR
Sbjct: 28 DAARPVGPTRPPNTRG--HPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRGR 159
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.330e-27 Identity = 87/184 (47.28%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 214 RLVGPTEPAVDLNATYPYARAPFPLPSHSFCQLGCSFFFAGSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVDGIMSACPSGTYRNTSYDM-------INTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMT 744
RL GP +P T+P+ A FP + +FC+LGC +FF+ N TC C Y + + G +D AE ++LEC DGCNIA+ CQ GY CV+G M+ CP+G YR + D+ ++TCI +KGR DXXXXXXXXXXXXXXXXXXXXXXXXX EEG+ C C+T
Sbjct: 44 RLFGPIKPPD--TRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSANDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRYCKCIT 225
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.310e-26 Identity = 83/170 (48.82%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 301 FCQLGCSFFFAGSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVDGI-MSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSCLSEWQNFQRDSMPYIGR 807
FC+ GC++F++ SP +C CD+ Y S ++D+AEK+RL+CRDGC I R CQPGY C M C GTYRN S + CI E G G+ DXXXXXXXXXXXXXXXXXXXXXXXXX + EG A C+ +T +S E+QN +S P++GR
Sbjct: 35 FCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHGMVECEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGR 204
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.000e-25 Identity = 88/204 (43.14%), Postives = 115/204 (56.37%), Query Frame = 1
Query: 295 HSFCQLGCSFFFAG--SPQNTT-CGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSC-------------------------VDGIMSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSCLSEW-----QNFQRDSMPYIGR 807
+ FC++GC+ FF+ P + + C CD Y +N++VG ND E SRLECRDGC +A++RCQPGY C G MS CP+G YR+ SYD I C++ E+ KG+ + XXXXXXXXXXXXXXXXXXXXXXXXX A C C+T +SC E + +R+++PYIGR
Sbjct: 97 YKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGR 300
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.050e-23 Identity = 86/197 (43.65%), Postives = 111/197 (56.35%), Query Frame = 1
Query: 304 CQLGCSFFFA---GSPQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSCVD---------------------GIMSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSCLSEW-----QNFQRDSMPYIGR 807
CQLGC+ FF+ Q ++C LCDD YA+N++V ND E RLECRDGC++A+ RCQPGY C+ G M C G+YR+ SY ++TC+ E +G + XXXXXXXXXXXXXXXXXXXXXXXXX F E G C C+T +C E +R+++PY+GR
Sbjct: 232 CQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGR 428
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.290e-17 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 1
Query: 211 QRLVGPTEPAVDLNATYPYA--RAPFPLPSHSFCQLGCSFFFAGS--PQNTTCGGLCDDFYAHNVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSC----------VDGI--------MSACPSGTYRNTSYD 546
+R +GPT P+ + Y +A + +P FC+ GC+FF++ P N TC C YA+ SVG ND A +RLEC DGC++A+ RC+PGYSC VD M+ACP GT+R Y+
Sbjct: 86 RRPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLYN 219
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Match: K0QZJ0_THAOC (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC) HSP 1 Score: 89.4 bits (220), Expect = 1.290e-16 Identity = 93/250 (37.20%), Postives = 124/250 (49.60%), Query Frame = 1
Query: 103 VSGTLEQCHQDCAGNTTSELVADAALNGGTWSVWDTQRLVGPTEPAVDLNATYPYARAP------FPLPSHSFCQLGCSFFF----AGSPQNTT------CGGLCDDFYAH-NVSVGINDYAEKSRLECRDGCNIAVRRCQPGYSC------------VDGIMSACPSGTYRNTSYDMINTCIEXXXXXXXENEKGRGVGDXXXXXXXXXXXXXXXXXXXXXXXXXDGYFAEEEGTAECSCMTENSCLSE 765
V T EQC DC +D W D P A+ L YPY A +P +FC+LGC++FF + P++ + C C++ + + + + ND +RLECRDGC +A+RRCQPGY C G M+ CP GTYR+ Y + C+ E+ KGR XXXXXXXXXXXXXXXXXXXXXXXXX FA + + C+C+T ++C E
Sbjct: 154 VLATEEQCRIDCN--------SDDRTPTRPWHEQD------PLRNALRLTRPYPYHAAADDDERDYP----AFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGRSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASQPASY-CTCITPDACARE 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.89.1 >prot_P-littoralis_Contig148.89.1 ID=prot_P-littoralis_Contig148.89.1|Name=mRNA_P-littoralis_Contig148.89.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp MMPDGLLRGFVVPATLAFACQAWMTTTTTSTYLFVSGTLEQCHQDCAGNTback to top mRNA from alignment at P-littoralis_Contig148:350548..352341- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.89.1 ID=mRNA_P-littoralis_Contig148.89.1|Name=mRNA_P-littoralis_Contig148.89.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1794bp|location=Sequence derived from alignment at P-littoralis_Contig148:350548..352341- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:350548..352341- >mRNA_P-littoralis_Contig148.89.1 ID=mRNA_P-littoralis_Contig148.89.1|Name=mRNA_P-littoralis_Contig148.89.1|organism=Pylaiella littoralis U1_48|type=CDS|length=813bp|location=Sequence derived from alignment at P-littoralis_Contig148:350548..352341- (Pylaiella littoralis U1_48)back to top |