mRNA_P-littoralis_Contig148.85.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 2.530e-211 Identity = 393/664 (59.19%), Postives = 436/664 (65.66%), Query Frame = 1
Query: 532 IEQVDGAPGECQGCDFSEGGTSSQENMVCMPPHVFAFCIVLSALASGIVVASQRIHRAMREKLRRLLEPSG--VHNPHLRRRSASRQLDKNFEGPLVVKAAEAMDRAAAAPLELEDKVPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAINANADT-TTXXXXXXXXXXXXXXXXXXXXXXRAKSRSPSKKTPKKNRTPAAPAQVIHRTP-PRTVSTPGRQ---ICPDSGRSRARANDTAP-GSRRKAFSPTPDQRLESHRAPWEGSNHHHSNGPETHAPASRGGKKVSXXXXXXSDAVAMWDAHREGLDSAVGGGAGVT-----GERAAAVGCPIGSSEGRRDR-AGRGDSGGAR----REHHRGEEDALPIEDRLQAVRRDLGVPFGEQEGLAQGMTMRPDTGGGGWNGGRTVVGTRESAEAVASDEGEEFADARSGGGSAVAGGVLADEKNDGEQSEAGALHNVRAET 2469
+E E GC E SSQ NMVC+PPHVFAFCIV+SAL S IVVA+QRI+ A+RE LR+LLEPS VHNP L RSAS QLDK+ EG V++AAEAMDRAAAAPL LE K+PARYVRAFCGNEKHA +RW+ATLKWRKENEID+ILNEPQ FHDIRRYFPSHMSGRSRGGHIVVYEKLG VDMR L R++GVTVPMLLRHWIFVSEY YRVLQPTDSAQQI IEDMK VRIQ+LAGKIQEY+KAVA LAR HYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDL+ LQDEIDPQ LPVEYGGTMT PVS+S +ERNLRRLVDAINANAD T XXXX R RS K PKKN P++ + R+P +T P Q + P SGRSRAR ND A G +A S P++ L RA W GS+ S PA+ G DA+R V G G VG G R++R GRG AR +HH+ EEDA PIEDRLQAV RDLGVP GEQE + QG R GG NG R G ESA VA+ EG RS G GG + +N+G+ S AG A T
Sbjct: 14 LEAFTSTSDEPHGCSCCEDTPSSQ-NMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIDPQLLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEATVAATPKNGDDGGGAKXXXXPTRRPSFRSXEKXXPKKNGKPSS----VQRSPFGKTQPVPAAQELHVSPKSGRSRARTNDNATAGGGPRAHSLLPERDLGPRRATWSGSSGRGSAASRVPLPANEG-----------LTVAIREDAYRPHTRRVVADQGGSRRRRELGSGRVGVGAERGVETERQEREGGRGSPPAARLLLGEDHHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGEAREGAGG---NGQRADTGALESAAVVATAEGNNL---RSQG---QHGGGMPALENNGDNSAAGRRTPSAART 652
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: D7G7T8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 1.190e-162 Identity = 254/320 (79.38%), Postives = 275/320 (85.94%), Query Frame = 1
Query: 559 ECQGCDFSEGGTSSQENMVCMPPHVFAFCIVLSALASGIVVASQRIHRAMREKLRRLLEPSG--VHNPHLRRRSASRQLDKNFEGPLVVKAAEAMDRAAAAPLELEDKVPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIDPQFLPVEYGGTMTVPVSE 1512
E GC E SSQ NMVC+PPHVFAFCIV+SAL S IVVA+QRI+ A+RE LR+LLEPS VHNP L RSAS QLDK+ EG V++AAEAMDRAAAAPL LE K+PARYVRAFCGNEKHA +RW+ATLKWRKENEID+ILNEPQ FHDIRRYFPSHMSGRSRGGHIVVY+KLGGVDMR L R++GVTVPMLLRHWIFVSEY YRVLQPTDSAQQI IEDMK VRIQ+LAGKIQEY+KAVA LAR HYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEI PQ + + G VP+ E
Sbjct: 25 EPHGCSCCEDTPSSQ-NMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGANVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYDKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIAPQAVMRDLG----VPLGE 339
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.450e-52 Identity = 100/232 (43.10%), Postives = 152/232 (65.52%), Query Frame = 1
Query: 877 VPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAINANADT 1572
VP RY+++ G+ + A++RW T+KWRKEN +D +L + QP FH I++++P + R R GH V Y+KLG + + L ++ GV V LL H+IF SEY ++V++P D+ + +ED++G+ SL G + E+IK V+ + HY ER +KTF++NAP WF FRVV+P L +T +KI ILG+DL+ + + I + +P EYGG ++V + S +E LR LV NA A T
Sbjct: 163 VPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKL-QQNGVDVEELLEHFIFHSEYLWKVVEPDDNFLMVAVEDVQGINAFSLQGVVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTDLTEMHEAIGIENVPKEYGG-LSVGLGYSEEEEELRCLVHD-NAKAPT 391
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A835YIT9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT9_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.000e-52 Identity = 97/218 (44.50%), Postives = 143/218 (65.60%), Query Frame = 1
Query: 973 DSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQK----------------------IRILGSDLS-ALQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAIN 1557
D IL+EPQP+F+ I+++FP+ + GR R GH+VVYEK+G + M+ L + GVT+PMLLRH++F EY +RV++P AQ ITI+D++G+ + L G E+ K A A +HYVERC++TF++N+PAWF L + +SPF+ RT++K +R+LGS+ LQ EI+P +P+EYGG+ T P+ ES +E NL +V AIN
Sbjct: 96 DMILSEPQPMFNIIKQHFPAFIYGRGRKGHVVVYEKVGSIHMKELAHQ-GVTLPMLLRHYVFSMEYLWRVVEPRGDAQLITIQDVQGIGLSDLTGMALEFAKGAAQTASKHYVERCYRTFIINSPAWFPLLWAAISPFVPLRTKKKASALDCPCGNCLSNHVATASIHVRVLGSNYRPVLQQEIEPDMIPLEYGGSCTTPLHESPEEANLSAMVTAIN 312
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A6H5JH73_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH73_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.240e-47 Identity = 96/237 (40.51%), Postives = 151/237 (63.71%), Query Frame = 1
Query: 877 VPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVL-----QPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSD-LSALQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAINANAD 1569
+P RY+ G+ A +RW+AT++WRKEN++D IL PQP FH+ R+ FP + GRSR G V++E++G VD+ A E+ + + +L +++F++E +R++ D AQ IT+ED+ GVR L K+ ++A+ + HYVERCHK++++NAP F +RVVS L RTR KI ILG++ L +++EID +P EYGG+ + +S DER ++ LV +N+ A+
Sbjct: 149 IPERYIVGCGGDVAEAGRRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDL-AKANELELPLSVLTPNYVFLNECVWRLILDRGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDTRTRAKISILGTNYLEEMKEEIDISQIPPEYGGSSGRAIDDSDDERKIQALVALLNSAAE 384
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.620e-45 Identity = 90/238 (37.82%), Postives = 142/238 (59.66%), Query Frame = 1
Query: 844 AAAAPLELEDKVPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSA--LQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDA 1551
A+ P+ E R++ A G+E+ R RW AT +WR+EN ID +L+EPQP F I++ +P + G+S+ GH V YE+LG VD + L ++ G+ + LLRH++F++E+ ++VL+P+DS + IT+ D++ L G + +I+ A HY ER + V+N P WF +++R +SP + T+ KIRI S S L ID LP YGGT + + ES +E+ L + V +
Sbjct: 17 ASKTPVIEEIPFSPRFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTL-KKSGLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENFGFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTSRDELLAAIDLDQLPSNYGGT-SCALGESDEEKRLAQHVQS 252
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A024USX5_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USX5_9STRA) HSP 1 Score: 172 bits (437), Expect = 5.350e-45 Identity = 86/230 (37.39%), Postives = 145/230 (63.04%), Query Frame = 1
Query: 886 RYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRIL--GSDLSALQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLV-DAINANA 1566
R++ A GN + RQR+ +TL WR++N ID++++EPQ FH I++ +P + G+S+ GH V YEKLG V+ +AL ++ G+++ LLRH+++++EY ++VL P+D+ + IT+ D++ L G + +I+ A +HY ER + +V+N PAWF +++R +S + T+ KIR+ G+ L ID LP YGGT + + ES +E+ L + V D ++A A
Sbjct: 28 RFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYFHGKSKNGHRVYYEKLGSVNFKAL-KKSGLSMDQLLRHYMYITEYLWKVLDPSDNGRSITVFDVENFGFYDLTGDVTSFIRQAMAFAGEHYPERSAQIYVINVPAWFHITYRAMSAMIDPVTKAKIRVCTSGAATEELLASIDADQLPSNYGGT-SCALGESDEEKMLAKHVNDRLSATA 255
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A6G0WJQ6_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ6_9STRA) HSP 1 Score: 172 bits (437), Expect = 5.670e-45 Identity = 88/228 (38.60%), Postives = 139/228 (60.96%), Query Frame = 1
Query: 886 RYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSA--LQDEIDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAINAN 1563
R++ A GN + RQR+ ATLKWR+EN ID++L EPQP FH I++ +P + G+S+ GH V YE+LG VD + L ++ G+++ LL H+++++E+ +++L+P+DS + IT+ D+ L G + +I+ A +HY ER + V+N P WF ++R +SP + T+ KIRI S + L ID LP YGGT + + ES +ER L + V+ N
Sbjct: 32 RFIAAEKGNLEKGRQRYEATLKWRRENRIDTLLYEPQPHFHIIKQNYPQYFHGKSKNGHRVYYERLGYVDFKTL-KKSGLSMDQLLHHYMYITEFLWKILEPSDSGRSITVLDVANFGFFDLTGDVTSFIRQAMAFAGEHYPERSAQIIVINVPGWFNATYRAMSPLIDPVTKAKIRICTSSTATQELLAAIDIDQLPSNYGGT-SCALGESEEERILAQHVERYLTN 257
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK) HSP 1 Score: 177 bits (450), Expect = 9.350e-44 Identity = 89/217 (41.01%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 844 AAAAPLELEDKVPARYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSD-LSALQDEIDPQFLPVEYGGT 1491
AAA P +P RY+R G+ + AR+RW TL+WR+E +D IL+EPQP F I++Y+P R R G + YE++G D+ A+ R GVT+ L+RH++FVSE+ +R ++ D AQ ITI D++G G +E+ + + + + HYVER +K FV+NAP WF + ++VV P L T++KI I G L + P+ +P EYGGT
Sbjct: 149 AAAGPTAGGAALPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAM-RARGVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICGKGRYEELLAYVGPENVPAEYGGT 364
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.040e-43 Identity = 86/229 (37.55%), Postives = 144/229 (62.88%), Query Frame = 1
Query: 886 RYVRAFCGNEKHARQRWRATLKWRKENEIDSILNEPQPLFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRALVREIGVTVPMLLRHWIFVSEYQYRVLQPTDSAQQITIEDMKGVRIQSLAGKIQEYIKAVAHLARQHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDE----IDPQFLPVEYGGTMTVPVSESSDERNLRRLVDAINA 1560
R++ A GN + R R+ +TL+WR+EN +D +L EPQP FH I++Y+P + G+S GH V YEK+G +D++A+ + G+T+ LLRH+++++EY + +L+P+DS + +T+ D+ G+ LAG + +++ +Y ER + F+VN P WF + + VVSP + T++KIRI A+++E I LP +YGG+ +V + ES +E L + VD + A
Sbjct: 321 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAM-KAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKG--RAVKEELLKSIAEDQLPADYGGS-SVKLGESDEEVALAKYVDQVLA 545 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.85.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.85.2 >prot_P-littoralis_Contig148.85.2 ID=prot_P-littoralis_Contig148.85.2|Name=mRNA_P-littoralis_Contig148.85.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=665bp MTDPCTDYTGTPDVGSGYIEQVDGAPGECQGCDFSEGGTSSQENMVCMPPback to top mRNA from alignment at P-littoralis_Contig148:337538..345379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.85.2 ID=mRNA_P-littoralis_Contig148.85.2|Name=mRNA_P-littoralis_Contig148.85.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7842bp|location=Sequence derived from alignment at P-littoralis_Contig148:337538..345379- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:337538..345379- >mRNA_P-littoralis_Contig148.85.2 ID=mRNA_P-littoralis_Contig148.85.2|Name=mRNA_P-littoralis_Contig148.85.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1995bp|location=Sequence derived from alignment at P-littoralis_Contig148:337538..345379- (Pylaiella littoralis U1_48)back to top |