mRNA_P-littoralis_Contig148.84.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.84.1 vs. uniprot
Match: A0A6H5KTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT4_9PHAE) HSP 1 Score: 816 bits (2109), Expect = 3.920e-291 Identity = 451/636 (70.91%), Postives = 514/636 (80.82%), Query Frame = 1
Query: 10 ECMDPAEEDEILGEQLRSLDSSMNTMFQDLEKKVKTDGNRNL---------ESSKEEKEAEKVREEEHRQKEKAALMAQLEGLSGGGLHRRPKWRWIAEGIDDPHPDRVLKGKYLWKAATLLIIVFYVRPKMTLMQRKARSKDRDTQDWNTTLTIYFDRCQTWLLKTARIPVGNSVLKNKTLNFRLSRLDGKKDAYG-AAAAGGGNAPGGFVSALIGKVARGMSHENLALTLMRLKVHAKGVINGLTQEMPPSDIMMFFSYLAADGNYFPQGFFFEEETEVLSFDELGAVRNLTPNTDAPESFDDTIYALHASKELDEELAADNQGHHEGFLDAHHLGWLVDAGHTLLEGTKAGKTVHAAA---ADRPTDLRAAVLHGRKTLPGKFKPVFRHEASSRWFDTSFVEMILTNYVTVRLLIPWILLYPKESGLIPSSGLKPSLLMHNCQVLASTVYLIVRVLRPELTAPNADTINAAIAEETRRATNIAAGDTGXXXXXXXXXXXXXXXXXXESARGGRVKSLSATEDVEDPKDEKDSSNEKRGGPRKKIAALRRGSRANVAPIRPRTVPEIMRQKRYVSISDKQLIPGLLPDAYFLPFAEQMRPWVLTLAAELDSWVQKVVGVVMGKVESSVIRQEGA 1878
E MD A++D ILG+QLR LDS+M+TMFQ+LE KV DG ++ E+ +E++ E+ REE+ RQKE+AAL+AQL+GLS GGL RRPKWRWIAEG+ DP PDRVLKGK+LWKAA LLIIVF+VRPK TLMQRKARSKDRDTQDWN TLTIYFDRCQTWLLK AR+PVGNSVLKN LNFRL+RLDGK++A+G AAA+GGGNA GGFVSAL+ KVARG++HENLALTLMRLKVH KGV+NGLTQEMPP+DIM FFSYLAADGNYFP GFFFE+ET +L+FDELGAVRNLTP TD P+ F+DT+YALH SK L+EELAAD+Q HHEGFLDAHHLGWLVDAGH+LLEGTKAG HAAA A RPTDLRAAVLHG + LPGKF+P++RHEA+ +WFDTSFVEMILTNY+ VR+LIPWILLYP+ESGL+PSSG+K SLLMHNCQVLASTVYLIVR+LRPELT PNADT+ AA+AEET RA IAA XXXXXXXXXXX XXXXX K+ A RRGSRA IRPRTV EIM+ +RYVS+SD+QL+P LLPD YFLPFAEQMRPWVL LAAE DSW+Q+VV VMGKVE S +RQE A
Sbjct: 17 EYMDLADDD-ILGQQLRELDSNMSTMFQNLENKVGKDGKKDSDLFKNADVQENRSKEEDVERKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGKHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKVARVPVGNSVLKNSALNFRLNRLDGKREAFGGAAASGGGNARGGFVSALVRKVARGINHENLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEKETNMLAFDELGAVRNLTPTTDRPDDFNDTLYALHNSKVLEEELAADHQDHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAATRPTDLRAAVLHGHEHLPGKFRPLYRHEANGQWFDTSFVEMILTNYLMVRVLIPWILLYPQESGLVPSSGVKQSLLMHNCQVLASTVYLIVRILRPELTVPNADTMQAAMAEETERAAKIAAXXXXXXXXXXXXXXXSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---KLGARRRGSRAAAPVIRPRTVREIMQTRRYVSVSDRQLVPALLPDVYFLPFAEQMRPWVLQLAAEFDSWMQRVVAEVMGKVEGSAMRQERA 648
BLAST of mRNA_P-littoralis_Contig148.84.1 vs. uniprot
Match: D7G7T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T7_ECTSI) HSP 1 Score: 600 bits (1547), Expect = 3.140e-209 Identity = 306/414 (73.91%), Postives = 354/414 (85.51%), Query Frame = 1
Query: 4 EEECMDPAEEDEILGEQLRSLDSSMNTMFQDLEKKVKTDGNRNL---------ESSKEEKEAEKVREEEHRQKEKAALMAQLEGLSGGGLHRRPKWRWIAEGIDDPHPDRVLKGKYLWKAATLLIIVFYVRPKMTLMQRKARSKDRDTQDWNTTLTIYFDRCQTWLLKTARIPVGNSVLKNKTLNFRLSRLDGKKDAYGAAAAGGG-NAPGGFVSALIGKVARGMSHENLALTLMRLKVHAKGVINGLTQEMPPSDIMMFFSYLAADGNYFPQGFFFEEETEVLSFDELGAVRNLTPNTDAPESFDDTIYALHASKELDEELAADNQGHHEGFLDAHHLGWLVDAGHTLLEGTKAGKTVHAAA---ADRPTDLRAAVLHGRKTLPGKFKPVFRHEASSRWFDTSFVEMILTNYV 1206
EE+ MD AEED++LG+QLR LDS+M+TMFQ+LE V DG ++ E+ +E++A K REE+ RQKE+AAL+AQL+GLS GGL RRPKWRWIAEG+ DP PDRVLKG++LWKAA LLIIVF+VRPK TLMQRKARSKDRDTQDWN TLTIYFDRCQTWLLK AR+PVGNSVLKN LNFRL+R DGK++A+G A NA GGFVSAL+ KVARG+SHE+LALTLMRLKVH KGV+NGLTQEMPP+DIM FFSYLAADGNYFP GFFFEEET++L+FDELGAVRNLTPNTD P+ F+DT+YALH SK L+EELAA++QGHHEGFLDAHHLGWLVDAGH+LLEGTKAG HAAA A RPTDLRAAVLHGR+ LPGKF+P++RHEA+ +W DTSFVEMILTNY+
Sbjct: 15 EEDYMDLAEEDDVLGQQLRELDSNMSTMFQNLENNVGKDGKKDSDLFKSADAQENRSKEEDANKKREEQGRQKERAALLAQLKGLSDGGLTRRPKWRWIAEGVHDPPPDRVLKGRHLWKAAALLIIVFFVRPKRTLMQRKARSKDRDTQDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAFGGGGASXXXNARGGFVSALVRKVARGISHESLALTLMRLKVHVKGVLNGLTQEMPPTDIMTFFSYLAADGNYFPDGFFFEEETKMLAFDELGAVRNLTPNTDRPDDFEDTLYALHNSKALEEELAANHQGHHEGFLDAHHLGWLVDAGHSLLEGTKAGMAGHAAATAAAARPTDLRAAVLHGREHLPGKFRPLYRHEANGQWLDTSFVEMILTNYL 428
BLAST of mRNA_P-littoralis_Contig148.84.1 vs. uniprot
Match: A0A836CDK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK1_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.200e-35 Identity = 162/541 (29.94%), Postives = 241/541 (44.55%), Query Frame = 1
Query: 325 LWKAATLLIIVFYVRPKMTLMQRKARSKDRDTQDWNTTLTIYFDRCQTWLLKTARIPVGNSVLKNKTLNFRLSRLDGKKDAYGAAAAGGGNAPGGFVSALIGKVARGMSHENLALTLMRLKVHAKGVINGLTQEMPPSDIMMFFSYLAADGNYFPQGFFFEEETEVLSFDELGAVRNLTPNTDAPESFDDTIYALHASKELDEELAADNQGHHEGFLDAHHLGWLVDAGHTLLEGTKAGKTVHAAAADRPTDLRAAVLHGRKTLPGKFKPVFRHEASSRWFDTSFVEMILTNYVTVRLLIPWILLYPKESGLIPSSGLKPSLLMHNCQVLASTVYLIVRVLRPELTAPNADTINAAI--------AEETRRATNIAAGDTGXXXXXXXXXXXXXXXXXXESARGGRVKSLSATEDVEDPKDEKDSSNEKRGGPRKKIAALRRGSRANVAPIR-------------PRTVPEIMRQKRYVSISDKQLIPGLLPDAYFLPFAEQMRPWVLTLAAELDSWVQKVVGVVMGKVESSVIRQEGAIN 1884
L++AA ++++ F RP++ + RK++S+ +D ++ TL +Y RC+ W L+ R+P+ S LK+ +L+ R GA A L+ + + +L L +LKVH KG+I+G+T+E PP DI+ F ++L ADGNY+P+GF F E +SF LGA R + + + G+ K G R T L + R++ K + H A+ +D S VEM++TN++ VR L+PW +LYP ESGL +G VLAS VY+++R LRPEL A + + + A N AA D XXXXXXXXXXXXXXXXXX V S G P A RR SR A + + + E MR+ R +S+ L LLP A+F P A M W+L +A +L++W+Q + V + V+R G+ +
Sbjct: 73 LFRAAAIVVLAFVARPRLDALSRKSKSRTQDADEFAATLALYQGRCRAWALRATRLPLS-SCLKDPSLSLRA----------GATTAXXXXXXXXXXRRLL----QAKTGGSLELRHTKLKVHVKGIIDGVTREPPPHDIIKFLAFLIADGNYYPEGFLFPGECARMSFSPLGATRWIV-----------------------RPAGSGDNGNGXXXXXXXXXXXXXXXXXXXRTTVKRGM--------RKTSLPPTLEIVRRS---KKACTYVHGATGVAYDVSTVEMLVTNFLLVRQLLPWAVLYPWESGLKRLAG-----------VLASCVYMLLRPLRPELAAAGEXXXXXXXXXXXXXXSSTQEQAAANQAAVDLAXXXXXXXXXXXXXXXXXXXXXXXXXVHS---------------------GAP----ALARRASRQAQAQVTVALFKKSGGAAPPAKALAESMREGR--PLSNALLAAALLPPAHFAPMATLMERWLLPVAGQLNAWIQDALQQV---AQGRVLRSSGSAD 523 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.84.1 >prot_P-littoralis_Contig148.84.1 ID=prot_P-littoralis_Contig148.84.1|Name=mRNA_P-littoralis_Contig148.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=624bp MDPAEEDEILGEQLRSLDSSMNTMFQDLEKKVKTDGNRNLESSKEEKEAEback to top mRNA from alignment at P-littoralis_Contig148:331212..333929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.84.1 ID=mRNA_P-littoralis_Contig148.84.1|Name=mRNA_P-littoralis_Contig148.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2718bp|location=Sequence derived from alignment at P-littoralis_Contig148:331212..333929+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:331212..333929+ >mRNA_P-littoralis_Contig148.84.1 ID=mRNA_P-littoralis_Contig148.84.1|Name=mRNA_P-littoralis_Contig148.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1872bp|location=Sequence derived from alignment at P-littoralis_Contig148:331212..333929+ (Pylaiella littoralis U1_48)back to top |