prot_P-littoralis_Contig148.76.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig148.76.3
Unique Name	prot_P-littoralis_Contig148.76.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	131

Homology

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.530e-58
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELAGKMDPGTNVAPMAM 130
            RHVILPKDLAKGLPKSRVLTEQEWR LGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDP LE EAK AYQ+ELA KMDPGTNVAPMAM
Sbjct:   19 RHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKMDPGTNVAPMAM 112

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.070e-41
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELAGKMDPGTNVAPM 128
            RHVILPK+LAK LPK+R+L+EQEWR +GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GK+DP LE EAK+AYQ  L        N APM
Sbjct:   37 RHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE------LNQAPM 122

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.410e-39
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELA 116
            RHVILPK+LAK LPK+R+L EQEWR +GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKVD  LE +AK+AY   LA
Sbjct:   38 RHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLA 117

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.060e-38
Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELA 116
            RHVILPKD A+ LPK+R LTE EWR +GVQQSRGW HYA H+PEPHILLF+RPLGTDPVSG+VDP LE EA+  YQ+ELA
Sbjct:   20 RHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.060e-38
Identity = 60/79 (75.95%), Postives = 69/79 (87.34%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEEL 115
            RHVILPKDLAK LPK+R+L+E EWR +GVQQSRGWMHYAIHRPEPHILLF+RPLGTDP SG+VDP LE EA+  Y+ + 
Sbjct:   21 RHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYKNQF 99

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A835YHQ2_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ2_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.180e-38
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEEL 115
            RHVILPK+LA+GLP +R+L E+EWR LGVQQSRGW+HYAIHRPEPHILLF RPLGTDP+SG+VDP  E EAK  Y E L
Sbjct:   19 RHVILPKELARGLPNTRLLQEEEWRLLGVQQSRGWVHYAIHRPEPHILLFHRPLGTDPLSGQVDPEKEREAKEGYAEHL 97

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 133 bits (334), Expect = 6.120e-38
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELAG 117
            RHVILPK++A+ LPK R+LTE EWR +GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKV+  LE EAK  Y E + G
Sbjct:   19 RHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNG 99

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.160e-37
Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELA 116
            RHVILPK+ AK LP+SR+LTE EWR LGVQQSRGW HYA+H PEPHILLF+RPLGT+PV+G+VDP LE EAK  Y EEL+
Sbjct:   18 RHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELS 97

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A7S2VEK7_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEK7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.410e-37
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEEL 115
            RHVILPK+LAK LPKSR+LTE EWR +GVQQSRGW HYAIHRPEPHILLF+RPLGTDP SG+VDP LE  A++ Y+ + 
Sbjct:   37 RHVILPKELAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELERAARDEYKNQF 115

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BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.770e-37
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0

Query:   37 RHVILPKDLAKGLPKSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEAEAKNAYQEELAGK 118
            RHVILPK+LAK LPKSR+L+E EWR +GVQQSRGW HYAIHRPEPHILLF+RPLGTDP SG+VDP +E +A++ Y+ +   K
Sbjct:   51 RHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEYRSQYQRK 132

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig148.76.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7T5_ECTSI	1.530e-58	93.62	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BBH9_9STRA	2.070e-41	72.83	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2BWV6_9STRA	6.410e-39	77.50	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S3MEH0_9STRA	1.060e-38	76.25	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A6S9ANL1_9STRA	1.060e-38	75.95	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A835YHQ2_9STRA	4.180e-38	75.95	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
W7T145_9STRA	6.120e-38	72.84	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A6H5L2I6_9PHAE	1.160e-37	75.00	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2VEK7_9STRA	1.410e-37	74.68	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S0UH58_9STRA	5.770e-37	70.73	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 37..51 score: 65.13 coord: 74..88 score: 79.49 coord: 59..73 score: 76.41
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 32..91 e-value: 3.3E-29 score: 113.0
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 37..89 e-value: 3.6E-25 score: 88.0
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 77..87
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 33..99 e-value: 4.0E-26 score: 93.0
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 32..90
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT	coord: 37..110
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 37..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig148	contig	P-littoralis_Contig148:317602..318930 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig148.76.3	mRNA_P-littoralis_Contig148.76.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig148 316839..321521 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig148.76.3 ID=prot_P-littoralis_Contig148.76.3|Name=mRNA_P-littoralis_Contig148.76.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp
MVGASFGPLIQRRASPLSCERVCSCVLFSPSPVFLPRHVILPKDLAKGLP
KSRVLTEQEWRALGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVD
PTLEAEAKNAYQEELAGKMDPGTNVAPMAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub
IPR036858	Cyclin-dep_kinase_reg-sub_sf