mRNA_P-littoralis_Contig1.35.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI) HSP 1 Score: 1158 bits (2995), Expect = 0.000e+0 Identity = 775/1139 (68.04%), Postives = 843/1139 (74.01%), Query Frame = 1
Query: 100 EEPAIPFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNED------------KNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENS---AAATASKAKGGGPGPRAGDAA-GEAEEAA-RSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAK----DSSNCGRSNAVVSDASPSVQEGGSGGSVPGA--------GGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFFAKMHA 3429
EEP IPFPFEPYDVQKQLM KIY+TL+ GG+GIFESPTGTGKSLSVICSALQWLKDAEA+ VDG S +GG + + +NAS GXXXXXXXXX S +PSWLKD+TRQKS+NE+ RAKR++ RR DL+ RL RKE G VGA + ++ D ++ SAE D+E+L+AEYDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXEW DLGL+QILYVSRTHSQTSQFVNEVKKTAFA+GVRCASLGSRRTLCGNERVSSL TDGKMRDACLELQKNK K XXXXXXXXXXX XXXXXXXXXXXXXXGT+ GCPLLAA+GQREFPYRALA+VRDIEELA LGK+EGTCAYYGARKAA+LAQLVVMPYAALLSRE+RAAMGVRLEGAVVVVDEAHNIVEAINSVHSKK+VLSE+ARAHSQLSQYE +YG RLKGSNAFYVGNILR+LRA+LKFL+KGK+KL+A RAEN+ AA G GPRA AA GEAEEA RSEM EIN+FLFR GLDN+NLFKLQRYMRRSEISRKVMGFMDLS A S ++ L+ S S D S CG S A G FVSKH+SALQ VE FLDALTNASRDGR+L+TFGGK+G +S + G XXX EEPS+KFLMLNP+VHFDEIVQKARALVL+GGTMQPTGDLVRQLFSS+EPSRVEVFSCGHVIPRENLLPLCVS GPSGK+FNFTFH+RGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQ VLQRWK+SGT RQL+KLKS+FSEPRSAK+VDAVLR+FS+AARAGAWK T XXXXXXXXXXXXXX LSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASP S GRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVD RY++D+VVRLLPGWIAERV KPANFGQCFV+LRRFFA+MHA
Sbjct: 19 EEPDIPFPFEPYDVQKQLMRKIYSTLENGGIGIFESPTGTGKSLSVICSALQWLKDAEAKDVDGKS------DGGGSPARXXXXXXXXXXGFGTENASCGXXXXXXXXXGA-SAMPSWLKDMTRQKSDNEKEARAKRVRERRRDLDKRLAAVRKED-------------------EHXXXXXXXRGDGVGA--------------AADDGDGKR-------------SAEVGVDDEYLVAEYDSGKEGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWEDLGLRQILYVSRTHSQTSQFVNEVKKTAFAKGVRCASLGSRRTLCGNERVSSLKTDGKMRDACLELQKNK--KSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGTRKSEGEXXXXXXXXXXXXXXGTTDGCPLLAADGQREFPYRALASVRDIEELAALGKEEGTCAYYGARKAASLAQLVVMPYAALLSREARAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKVVLSEVARAHSQLSQYEAKYGTRLKGSNAFYVGNILRLLRAVLKFLTKGKEKLQAARAENAKTTAAXXXXXGNSGVQGPRAAAAACGEAEEAGVRSEMLEINDFLFRAGLDNMNLFKLQRYMRRSEISRKVMGFMDLSAASSPEVTLRKNASLSQNGGNTDDSGCGCSKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVFVSKHISALQTVEAFLDALTNASRDGRVLATFGGKEGDGRSSSRGSVGGXXXRGATAGQKTTQDE-----EEPSVKFLMLNPAVHFDEIVQKARALVLVGGTMQPTGDLVRQLFSSVEPSRVEVFSCGHVIPRENLLPLCVSKGPSGKTFNFTFHRRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQ---------------VLQRWKASGTLRQLSKLKSVFSEPRSAKDVDAVLREFSLAARAGAWKPT-------TSXXXXXXXXXXXXXXLLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPSSRGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDERYKDDQVVRLLPGWIAERVVKPANFGQCFVSLRRFFAEMHA 1075
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA) HSP 1 Score: 691 bits (1784), Expect = 3.790e-229 Identity = 485/1153 (42.06%), Postives = 613/1153 (53.17%), Query Frame = 1
Query: 106 PAIPFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPS------AKDSSNCGRSNAVVSDASP-------SVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSSLEPSR--------------------------------VEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFFAKMHA 3429
P+IPFPF PY+VQ+QLM+ +Y ++GG+GIFESPTGTGKSLS+IC+ALQWL ++AR ++ A+ + + A+ + + S P WL + + K ++ + +A+R++ R L RL S S K+ G T G G KR + +A + S S + EA D +FL+ EY S EW +LG+ Q+LY SRTHSQTSQFVNEVKKTAFA GVRC +LG RR LC N VSSL +D +M DACL+LQK K++ G + + KRA+ G +GC L+ QREF ALAAVRDIEEL ELG+ C YYG RKAAALAQLVVMPYAALL RE+R A+GVRL G VV+VDEAHNIVEA+N+VHS + L E+ RAH QL+QY RY ARLKG N FYV ILR+L+++++FL KG AT A ++ IN+F FR G+DNVNLFK++RYMRRS I RK+MGF+DL++ ++ A+ ++ ++ +DA P S G V A A+VS+HVS+LQ FL ALTNA +DGR++ + S + G + PSLKF+MLNP+VHF EI ++ARA+VLIGGTMQP G + +QLF + P R +EVFSCGHVIP EN+LPLCVS GPSG FNFTF +RG+ EQ+DEL RL++NVC LVPGGVVCFL S+GY++Q VLQ WK+SG QL+K K+IFSEPR+A EV+++L +S A +S+G XXXXXXXXX LSVVGAKMSEGINFSDDLARCVVMVG+P+PD RD EL+QK+ Y D A P GRAGR Y ++CMRAVNQSIGR IRHA DY ++LLVD RY V LP WIA R A FG AL FF A
Sbjct: 17 PSIPFPFPPYEVQQQLMTHLYTAFERGGIGIFESPTGTGKSLSIICAALQWLTVSDARDLE----AALQPDDVQLATPQSSDRST------------TKAEPDWLANFSEIKEQDAQRAKARRLKQMREALAARLAAI--------SSVDSIKQHRGA-------GKTMNGRHSQRDGVKRRKQAQAAAAAS-------------------SGADEAAGDGKFLVDEYLSGEDAHSSSSGSDTEAASSSDEREDAREEA------EWRELGITQVLYCSRTHSQTSQFVNEVKKTAFAAGVRCVTLGGRRNLCINPAVSSLSSDARMTDACLDLQKGKKKASCGSSC--------------AQPPPAKRAKQ------------------------------GVAAGGGRKGEKRGCEWLSVATQREFRDHALAAVRDIEELGELGRGLHACPYYGTRKAAALAQLVVMPYAALLQRETRRALGVRLRGNVVIVDEAHNIVEAVNAVHSAVVRLRELRRAHFQLAQYLARYAARLKGKNVFYVNTILRMLQSLIRFLEKG--------------ATQDPXXXXXXXXXXXXXXXXXXXA---QVLRINDFAFRAGIDNVNLFKVERYMRRSGICRKIMGFLDLTQTAAAAXXXXXXXXXXXTADRYAEGAAGGAAESSAQADAVPAQVRHCRSSAHAGEDVEVSAAV-AYVSRHVSSLQTAHQFLMALTNADKDGRVIVR---RPAPPPLSRDRSAGPPAPPTAADADN----------DGPSLKFIMLNPAVHFAEIAREARAVVLIGGTMQPAGAIAQQLFPGIAPRRAAXXXXXXXXXXXXXXXXQXASSESEGAAAGGLEVFSCGHVIPPENILPLCVSRGPSGGVFNFTFAKRGSPEQMDELCRLLSNVCALVPGGVVCFLPSFGYMEQ---------------VLQCWKASGALHQLSKRKAIFSEPRAATEVESILAAYSAAIH----RSSGX------------XXXXXXXXXLLSVVGAKMSEGINFSDDLARCVVMVGMPFPDARDPELRQKIEYADAADPAGGGRAGRALYQAMCMRAVNQSIGRCIRHARDYGAVLLVDERYARAATVAQLPSWIAARAAAAPAFGDAARALGAFFRARRA 1007
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: A0A4D9CWW8_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWW8_9STRA) HSP 1 Score: 541 bits (1393), Expect = 4.110e-172 Identity = 409/1127 (36.29%), Postives = 559/1127 (49.60%), Query Frame = 1
Query: 154 MSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVG-AGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEA----PEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYR--ALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLS----EACSSQIILQTKPSPS-AKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAW----KSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDE-------ASPGSN-------------GRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRND-EVVRLLPGWIAERVAK---PANFGQCFVALRRFF 3414
M ++Y T+D G +G+FESPTGTGKSLS+IC++L WL+D + R G A+ +S T P WL+D + K E+ ++I+ R+ L+ RL R D S++ +K KY +G R + RP AG RR AE ED + L +Y+S D ++ILY SRTHSQ SQFV E++KT F VR SL SR+ LC NE V LG+D ++ D CL+LQK K I + + +KD + D TK++ RA+++K CP L QR+ YR AL+ +R++E+LA LGK+ TC YYG R+A A A+++ MPYA LL + +R +M + L+ VV++DEAHN+VEAIN+VH+ ++ L ++RA +Q++ Y RY +RL G N YV I+R+L ++KF+ + +A AT S A G+ + +A MT +NE +F G+DNVNLFK+ RYM +S+IS+KV+GF+D + S+ SPS A D+ G S+A + G +VS H+S+LQ V+ FL ALT SRDGRI+ T KG +KF+MLN +VHF EIV +AR++VL+GGTMQP +V QLF L SR++VFSCGHVIP +NLL LC+S GP+G F+FT RG +Q+DELGRL+ NV + PGG+V FL SY Y E ++ RW+ S +L KSIFSEP+ AK+V+A L+ +S A G + +G G VVGAKMSEGINF+D +AR VVMVGLPYPD+RD EL+QKM YLD A+ N G+ YY ++CMRAVNQSIGR+IRHA D+A+I+LVD RY D +V LLP WIA+R+ NFG+ FV L RFF
Sbjct: 1 MEQLYKTIDAGRIGLFESPTGTGKSLSLICASLYWLRDRQRRDEVGEEDPLAAP----------SLSSTPHGATAMAMNTGGETEPDWLRDYGKVKEREAAIEKRRKIRERQQALQRRLEEARHA----DDRSNTLRKE-------------KYLHGNIGLVERCKKRPFDAG--------------------RRGDKKAEGLWDDEEDADLLPVKYESGCEQDDDSDRESTPNDLAYGMDKEGDEGEEL-------DRSTRKILYCSRTHSQVSQFVMEIQKTGFRDDVRVISLSSRKNLCINEEVLKLGSDSRISDRCLDLQKGKNTN-IVVSDMQSDQKDTSDKTDSKGTKKRPRADASK--------------------------------------RQVKCPFLLERDQRQDLYRDHALSKIRNLEDLAALGKKLDTCPYYGTRRAVAQAEVICMPYATLLHKGTRESMKIPLKDNVVLIDEAHNLVEAINAVHTTQLSLQVMSRALNQMTLYWERYKSRLSGKNTVYVQQIIRLLGGLVKFVRR--------KASPHVLATTS-------------ATGQEDTSATVIMT-VNELVFEAGMDNVNLFKVVRYMEQSQISKKVLGFVDRRGTEVQIHGSESTFPATCSPSQATDTGVLGESSAGL--------------------GNYVSNHISSLQNVQTFLVALTGCSRDGRIVLE---------TGHGPQKGRRQMAA-------------------GIKFIMLNAAVHFREIVSEARSVVLVGGTMQPVAPIVAQLFPDLPISRLDVFSCGHVIPPQNLLALCMSKGPTGIDFDFTHKSRGLVQQMDELGRLLLNVSTVTPGGLVVFLPSYAY---------------EEKLMTRWRESNLLSKLRSKKSIFSEPKQAKDVEATLQAYSAAIAEGEIHRKEECSGSGSVGAIL---------------FCVVGAKMSEGINFADGMARGVVMVGLPYPDRRDPELQQKMQYLDSLQFFKGAAAANDNTMPSKREKCIAIGATCGKTYYQNLCMRAVNQSIGRAIRHANDWAAIILVDRRYFADPSIVPLLPKWIADRIVPYNHSQNFGRAFVQLSRFF 934
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: UPI001486E2D1 (ATP-dependent DNA helicase DDX11 isoform X1 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI001486E2D1) HSP 1 Score: 524 bits (1350), Expect = 2.270e-166 Identity = 373/1113 (33.51%), Postives = 536/1113 (48.16%), Query Frame = 1
Query: 115 PFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSL-ESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKG-CPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCG--------RSNAVVSDASPSVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSS--LEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRA-GREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFF 3414
PFP++PYD+Q+Q M +Y TLD+G VGIFESPTGTGKSLS+IC AL WL D E + T+ E + S +A + S P W+ D +K+E + + K + +R RL + R V+ LK RK +A L + +E ++ G EDEE ++AEY+S E + + +I Y SRTHSQ +QFV+EV+K+ F++ + +LGSR+ LC NE V LG+ ++ D C+E+QKNKREK K G K+ R G +K CP A ++ L V DIE++ +LG++ +C YY R A AQLVV+PY LL +R A GV+L+G VV++DEAHN+ + ++S+HS ++ +++ RAHSQL+QY RY +RLK N Y+ IL V+ +++ L G + G +E+ IN FLF+ +DN+NLFKLQRY +S ISRK++GF++ + S + L T S + ++ G +S + + SP+ Q+G V A S + VE F ALTN++ DGR+L+ GT + E S+KFL+LNP+VHF E++++ RA+++ GGTMQP D ++L S + R+ FSCGHVIP EN+LPL + +GPSG+ +FTF R + +DE GR+++N+C +VPGGVVCF SY Y + ++ W++SG +L K IF EP+ A +V+ VL +FS + A + G SVVG KMSEGINFSDDL RCVVMVG+PYP+ + EL++KM+YLD+ P S GR+ G+ ++CM+AVNQSIGR+IRH GDY+SI++ D RY + LP WI R + FG F ALR+FF
Sbjct: 9 PFPYQPYDIQEQFMQALYKTLDQGKVGIFESPTGTGKSLSLICGALSWLTDHEEKSRQKTAALLHEGEASLSTSTAPSSAPSS------------SAEPDWITDFVHKKAERDLVSKLKEEELKRKKRAERLEMIRNN----------------VQ-------------LKYAMKRKSCEDEEAFKLLQLSKEEETEAQGD--------------QEDEELIIAEYESDDESKTRSRFCGAEDDTDD----------------ELVEEHVNKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLGSRQNLCINEEVRRLGSIQRINDCCMEMQKNKREKPHHKEGAKRKR-----------------------------------------------------------GPAKPVCPYNKASALQQMRDSVLGTVHDIEQMLKLGRETHSCPYYATRLAVPPAQLVVLPYQMLLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSSIHSAELTGAQLCRAHSQLTQYADRYKSRLKAKNLMYIKQILFVIEGLVRVL----------------------------GGKVGQNPQSQTTQTGTELHSINNFLFKAQIDNINLFKLQRYFEKSMISRKLVGFVE--KYAGSGVSLHTPSSSNKENRRTEGLNRYLQTLQSTQINAPVSPADQQGSEAEKVLSA---------SPMMQVEVFFMALTNSNTDGRVLAH---------RQGTLS-------------------------ESSVKFLLLNPAVHFAEVLKQCRAVIIAGGTMQPVSDFKQELLFSAGVGEERITEFSCGHVIPPENILPLVLCSGPSGQELDFTFQNRDSPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRR---------------IVSHWEASGALTRLANKKKIFQEPKKANQVEQVLSEFSRCIQRCAVDAGG-----------------LTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHSGGRSPGQALIENLCMKAVNQSIGRAIRHRGDYSSIVMCDRRYSRPATLSKLPTWIKSRTSTHTTFGPAFAALRKFF 886
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: K3W6Y0_GLOUD (Helicase ATP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Y0_GLOUD) HSP 1 Score: 521 bits (1342), Expect = 7.530e-165 Identity = 380/1105 (34.39%), Postives = 534/1105 (48.33%), Query Frame = 1
Query: 118 FPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEE----FLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLE-LQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPA-NFGQCFVALRRFF 3414
FP++PY +Q QLM ++YAT+D VGIFESPTGTGKS+S+IC AL WL + D A AS D+ S + P+WL + ++ E ++ ++ +E R E S + KKR K G + +E R+ G G +P RR + E+ D+E ++ YDS + G+ +I+Y SRTHSQ SQFV E++KT F +R SLGSR+ LC N V+SL +D +M D CL+ LQ K++ K KQKK+A T K CP E + ALA V DIEEL ELG + C+YYG R++ LAQ++ MPY+ LLS+++R ++GV L+G +V++DEAHNI+EAINS +S ++ ++ A L Y +Y RLKG N FY+ +L VL + KFL + A N A A+ +GG G ++M IN+FLF +D+ N+FK+ +Y+ +S +++K++GF+D + T P P V+ G V F S+H+S L+ +E L ALT+A DGRIL+ AKG E ++KF+++NP++HF+EIV+KAR+++L GGTMQP ++ QLFS + R+++FSCGHVIP +NL+ +S GPS + FTF +RG E LDELGR++ N+ ++VPGG+V F SY + E +QRW+++ F LN K +F EP+ E+ VL +S A + + LSVVG KMSEGINFSDDLARCVVMVGLPYP+ RDAEL +KM +LD+ +PG AGR+YY S+CM+AVNQSIGRSIRH DYASI+LVD RY + V + LP WI RV PA +FG + L +F+
Sbjct: 36 FPYDPYAIQLQLMQQLYATIDSQHVGIFESPTGTGKSISLICGALSWLT----KHTDEYGLLRA-------ASAHDQENSGTVPTTDGAAATTQAVEPNWLARFDQDHAQREAKQQQVTAKAALRGIE----AIRAEP------SENTKKR------------------------------KIGFAYNHQERQRRQVG-GPTPTRRAGTNGESKADDEDGDEHVVDAYDSDRVEHVASSDSESELKKPSTRRGPPEPPP---------EYGVVKIIYCSRTHSQISQFVREIRKTVFGDHIRVVSLGSRKNLCTNPSVASLRSDLQMTDKCLDMLQGAKKQTKA--------------------AKQKKKA------------------------------------------TGK-CPFYDKELLGYYKDYALAHVHDIEELHELGDEMSICSYYGTRESVPLAQVIAMPYSMLLSKDTRESLGVALDGNIVILDEAHNIIEAINSTYSIEVTSKQLVVARRSLWSYFKKYETRLKGKNTFYIKQLLSVLELLTKFLRLIGKSSKTTTATN---ANAASEEGGTNG---------------AKMMPINDFLFSAKVDHFNMFKIIQYLSQSGLAKKLLGFLDAENTLTQAAGASTDTVP-------------------PPVRR----GDVNDDDDVFQSRHISPLRTIEALLKALTSAGGDGRILAQ----------PPQPAKGI----------------------EGAIKFILMNPAIHFEEIVEKARSVILAGGTMQPVSQVIDQLFSKIPRDRIDLFSCGHVIPPKNLVGFSLSNGPSQRHLEFTFARRGDTEALDELGRILLNLARIVPGGIVVFFPSYRF---------------EEMTVQRWQTTTQFHDLNARKQVFREPKQTDELARVLSQYSAACTSPCGRGA----------------------MLLSVVGGKMSEGINFSDDLARCVVMVGLPYPNARDAELVEKMEFLDKRTPG----AGRQYYESLCMKAVNQSIGRSIRHQNDYASIVLVDHRYASPIVRKRLPEWIQVRVQPPAPSFGHVYAQLVQFY 902
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: UPI001E1DEBD1 (LOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEBD1) HSP 1 Score: 519 bits (1337), Expect = 4.580e-164 Identity = 402/1119 (35.92%), Postives = 551/1119 (49.24%), Query Frame = 1
Query: 100 EEPAI-PFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDL--------SEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLF--SSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDE--ASPGSNGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFFA 3417
E PA+ PFPFEPYD+QK M +Y L +G VGIFESPTGTGKSLS+IC AL+WLK+ + +Q + + N N +KN S S W+ D K E E++K++ + ++E RL R+ S KK V + + L A + ++ + + K+ V D E +DE +L EY+SXXXXXXXXXXXXXXXX ++ +I + SRTHSQ SQFV EV K+ + R SLGSR+ LC NE V L + + D C +LQK K EKK DK TK+KK G+S+GCP + ++F AL VRDIE+L LGKQ C YYG R A A++V +PY LL + +R A G++L+ +V++DEAHN++E IN+VHS ++ +++ RAHSQL QYE +Y +RLK N Y+ IL +L + K + GG + D ++ A + + IN+FLF + LDNVN+FK+ RY +RS+ISRK+ GF++ SE Q + S K S G VS+ + SV+E FV S L +E FL ALTNA +DGRI+ + + S+KFL+LNP+VHF +VQ+ARA+V+ GGTMQP + QLF + ++P R+ +SCGHVIP E LLPL VSTGP+G +FT+ R LDELGRL+ N+C +VPGGV+CF +SY Y E V W++SG +L K +F EP+ A + D VL+D++ + + TG VVG KMSEGINFSDDL RCV+MVG+PYP+ ELK+KM YL+ S + G+ +Y ++CM+AVNQSIGR+IRH GDYA+ILL+D RY V LPGWI++ + K FG F A+ +FF+
Sbjct: 38 EVPAVFPFPFEPYDIQKGFMRDLYTCLQQGRVGIFESPTGTGKSLSLICGALRWLKNFQEKQKQELEEMLSEE----NKENSNKNTSK------------ESGELDWISDF---KVRQEAEEKSKKV---KEEIEQRLK--------REAKLSEIKKTRKVTKRKRVQLEEDFDDLMKTA---------SSEIKDAFKMEMEKH------VEEAGDINE--DDENLILDEYNSXXXXXXXXXXXXXXXX----------------------EVHCTKIYFCSRTHSQLSQFVREVIKSPYGDDTRVISLGSRQNLCVNEAVRRLKSLSLINDTCRDLQKKKSEKK-----------------DKSETKRKK------------------------------------------TGSSQGCPYYKQDPIQDFKDSALVDVRDIEQLVSLGKQMKACPYYGTRLAVPDAEIVALPYNTLLHKSTREASGIQLKDNIVIIDEAHNLLETINNVHSTEVNGAQLVRAHSQLGQYEAKYRSRLKAQNLMYIKQILFILGNLTKCI-------------------------GGKTDQHPDK--QSVPFAETRLWTINDFLFHSQLDNVNMFKILRYCQRSQISRKLHGFVEKYRPEIVISSEKEKKQETSTSSLSSFLKSLSGKGNDTEKVSEPAESVEEKSD----------FVMS--SPLMHIESFLLALTNADKDGRIVIS----------------------------------KQKLFSQCSIKFLLLNPAVHFASVVQEARAVVVAGGTMQPISEFKDQLFHAAGVQPERILEYSCGHVIPGEQLLPLAVSTGPTGVQLDFTYTNRNKTSLLDELGRLVCNICNIVPGGVICFFSSYDY---------------EKFVYSHWENSGVLAKLQNRKKVFREPKRAGQADKVLQDYTTCIQNCSGSITGS--------------------ILFCVVGGKMSEGINFSDDLGRCVMMVGMPYPNINSPELKEKMDYLNANFVSIKEGRQPGQVHYENLCMKAVNQSIGRAIRHQGDYATILLLDRRYSRAGTVAKLPGWISKHLQKMDKFGNVFSAVSKFFS 920
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: A0A2I4ATX3_9TELE (putative ATP-dependent RNA helicase DDX11-like protein 8 isoform X1 n=3 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4ATX3_9TELE) HSP 1 Score: 518 bits (1333), Expect = 1.040e-163 Identity = 372/1114 (33.39%), Postives = 530/1114 (47.58%), Query Frame = 1
Query: 115 PFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQV--------DGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKG-CPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGAGGAFVSK--HVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSS--LEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRA-GREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFF 3414
PFP++PY++Q+Q M +Y+ LD+G VGIFESPTGTGKSLS+IC AL WL D E ++ +G + S S N S+ S P W+ D ++K+E E L ++L + ++ S SS + +K L+ +E R+++A EDEE ++AEY+S E + + +I Y SRTHSQ +QFV EV+K+ F++ + +LGSR+ LC NE V LG+ ++ D CLE+QKNK +K+ + G K+ R G +K CP A ++ L V D+E L +LGK+ +C YY AR AQLVV+PY +L +R A GV+L+G VV++DEAHN+ + ++ +HS ++ +++ RAH QL QY RY +RLK N Y+ IL V+ +++ L G + G A +EM IN FLFR +DN+NLFKLQ+Y +S ISRK+ GFM+ + S + L T S S K++ N + S Q S+ G A K VS + VEGF ALTN++ DGR++ E S+KFL+LNP+VHF +++++ RA+++ GGTMQP D ++L S +E R+ FSCGHVIP EN+LPL + GPSG+ +FTF R + +DE GR+++N+C +VPGGVVCF SY Y + ++ W++ G F +L K IF EP+ A +V+ VL +FS + A S+G +SVVG KMSEGINFSDDL RCVVMVG+PYP+ + AEL++KM+YLD+ P S GR+ G+ ++CM+AVNQSIGR+IRH GDY+SI+L D RY + LP WI +R A FG F ALR+FF
Sbjct: 21 PFPYQPYNIQEQFMRALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTDYEEKKXXXXXALLQEGEAALSTSVAPSSNTSS--------------------SAEPDWITDFVQKKAERE--------------LVSKLXXXXXXXXXXXXXXEMIRNNAHLKYASKRKSSEEDETIKF--------------LQLSKE--------------ERTETAGDQEDEELIVAEYESDDESKSKNRFLQGEDEEDD----------------ELVEEHVTKIYYCSRTHSQLAQFVREVQKSPFSKSISVVTLGSRQNLCINEEVRQLGSVQRINDRCLEMQKNKHQKQDHEDGAKRKR-----------------------------------------------------------GPAKSVCPYNKASALQQMRDEILGCVHDVEHLLKLGKETHSCPYYAARLTVPPAQLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSAELTGAQLCRAHCQLRQYADRYKSRLKAKNVMYIKQILFVVEGLVRVL----------------------------GGKVGQNPQSQTTQAGTEMHSINNFLFRAQIDNINLFKLQKYFEKSMISRKLGGFME--KYAGSGVTLHT--SSSNKENRRTEGLNRYLQTLQSS-QSSAPVSSIDQQGAAEADKVLAVSPMMQVEGFFMALTNSNTDGRVV----------------------------------VRKQDVLSESSVKFLLLNPAVHFAQVLKECRAVIIAGGTMQPVSDFKQELLFSAGVEEERIVEFSCGHVIPPENILPLVLCAGPSGQELDFTFQSRDSPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRR---------------IISHWEAGGVFARLANKKKIFQEPKKASQVEQVLNEFSRCIQKCAVDSSG-----------------LTGALLISVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSAELQEKMSYLDKHLPRSQGRSPGQALIENLCMKAVNQSIGRAIRHRGDYSSIILCDRRYSRPATLSKLPTWIKDRTNTHATFGPAFAALRKFF 898
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: A0A6P7KIR5_9TELE (ATP-dependent DNA helicase DDX11 n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7KIR5_9TELE) HSP 1 Score: 516 bits (1329), Expect = 3.920e-163 Identity = 388/1111 (34.92%), Postives = 564/1111 (50.77%), Query Frame = 1
Query: 115 PFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSL--ESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKG-CPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGA---GGAFVSKHVSA--LQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLF--SSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRA-GREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFF 3414
PFP++PYD+Q+Q M +Y+TL++G VGIFESPTGTGKSLS+IC AL WL D E R+ + + +EG K+ S +++G ST P W+ D ++K+E + + L + R V+ LK RK ++A L S EE +++ + EDEE ++AEY+S XXXXXXXXXXXXXXXXXXX + + +I Y SRTHSQ +QFV+EV+K+ F++ + +LGSR+ LC N+ V LG+ ++ D C+E+QKNK EK+ + G K+ R G +K CP A ++ L +V DIE+L +LG++ +C YY R + AQLVV+PY +L +R A GV+L+G VV++DEAHN+ + ++ +HS ++ +++ RA SQL+QY RY +RLK N Y+ IL V+ +++ L G + G A +EM IN FLF+ +DN+NLFKLQRY +S ISRK+ GF++ + S + L T+ S + ++ G + + S +Q S VP G A K +SA + VEGF ALTN++ DGR++ GT + E S+KFL+LNP+VHF E++++ RA+++ GGTMQP D ++L + + R+ FSCGHVIP EN+LPL + +GPSG+ +FTF R + + +DE+GR+++N+C +VPGGVVCF SY Y + ++ +W++SG +L K IF EP+ A +V+ VL +F+ + A S+G SVVG KMSEGINFSDDL RCVVMVG+PYP+ + EL++KM+YLD+ P S G++ G+ ++CM+AVNQSIGR+IRH GDY+SI+L D RY + LP WI +R FG F ALR+FF
Sbjct: 19 PFPYKPYDIQEQFMHSLYSTLEQGKVGIFESPTGTGKSLSLICGALSWLSDHEERKRQEAT--ALLQEGEKSLSTSAAQSTSGSS----------STEPDWITDFVQKKAERDLVSKXXXXXXXXXXXXXXLEMIRNN----------------VQ-------------LKYAIKRKSCEEDEAIKLLQHSKEE---------------QTEPSGDQEDEEHIIAEYESDXXXXXXXXXXXXXXXXXXXL----------------NEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLGSRQNLCINDEVRRLGSIQRINDRCMEMQKNKHEKQHHEEGVKRKR-----------------------------------------------------------GAAKSVCPYNKASALQQMRDGVLGSVHDIEQLLKLGRETHSCPYYATRISIPPAQLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSTELTGAQLCRARSQLTQYADRYKSRLKAKNLMYIKQILFVIEGLVRVL----------------------------GGKVGQNPQSQTTQAGTEMLTINNFLFKAQIDNINLFKLQRYFEKSMISRKLCGFVE--KYAGSGVTLHTQSSSNKENRRTEGLNRYLQS-----LQNNQSSAQVPPTDQQGSAEAEKVLSASPMMQVEGFFMALTNSNTDGRVVIH---------KQGTLS-------------------------ESSIKFLLLNPAVHFAEVLKECRAVIIAGGTMQPVSDFKQELLFAAGVGEERITEFSCGHVIPPENILPLVLCSGPSGQELDFTFKNRDSPQMMDEMGRVLSNICNVVPGGVVCFFPSYEYSRR---------------IISQWETSGALTRLANKKKIFQEPKKANQVEQVLGEFTRCIQRCAVDSSG-----------------LTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDKHLPHSQGKSPGQALIENLCMKAVNQSIGRAIRHRGDYSSIVLCDRRYARPATLSKLPTWIKDRTGTYTTFGPAFAALRKFF 897
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA) HSP 1 Score: 516 bits (1330), Expect = 5.030e-163 Identity = 405/1101 (36.78%), Postives = 560/1101 (50.86%), Query Frame = 1
Query: 118 FPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKGCPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGAGGAFVSKHVSALQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSSLEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRAGREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKP-ANFGQCFVALRRFF 3414
FPFEPYD+Q +LM ++YATLD VGIFESPTGTGKS+S+IC AL WL A ++ G +A+ + XXXXXXXXXXXX + PSWL + ++ E ++ ++ + + R EQ S+ + KKR + G KR RP A S ES ++ D E L+ YDS XXXXXXXXXXXXXX + D G+ +++Y SRTHSQ SQFV E+++TAF VR SLGSR+ LC N RV++L +D +M DACL++ +N K R+K+K+ A+ CP E F ALAAVRDIE+L +LG TCAYYG R++ LAQ+V MPYA LLS+++R ++G+ L GA+VV DEAHNIVEA+NS ++ ++ ++ A L Y +Y R +G NAFY+ +L +L + KFL + +++ AA ++M IN+FLF +D+ NLFK+ +Y+ S +++K++GFMD A + P+P ++ +A D G F S+HVS L+ VE L ALT+A DGR+L+ + T A E ++KF+ +NP+VHF+EIV KAR+++L GGTMQP ++ QLF + +R+++FSCGHVIP +NL+ +S+GPS + FTF +RG LDELGR++ N+ ++VPGG+V F SY + E V+ RW+++ F +++ K +F EP+ + E+ +VL +S A R G+ LSVVG KMSEGINFSD+LARCVVMVGLPYP+ RDAEL +KMA+LD SPG AGR YY S+CM+AVNQSIGRSIRH DYASI+LVD RY + V + LP WI ERV P A FG + L +F+
Sbjct: 21 FPFEPYDIQLRLMRQLYATLDSQHVGIFESPTGTGKSVSLICGALAWLS-AHTDEL-GLLRATPTXXXX-------------XXXXXXXXXXXXXSEPSWLAEFGAASAQRAEQQQQALVRG----ALSGVAKVRAEQ-----SAEASKKR-------------RVGLASARQETKRRRPLAAASSESAQDGD------------------------EHLVDAYDSDRVAAXXXXXXXXXXXXXXRSGAPRARGARGDGAPGDRPDYGVVKLIYCSRTHSQISQFVREIRRTAFGARVRVVSLGSRKNLCTNPRVTALRSDAQMTDACLDMLQNSSSSKAKAVA--------------SRSKKKRDAK---------------------------------------------CPFYDKERLGHFRDHALAAVRDIEDLHDLGSDLTTCAYYGTRESVPLAQVVAMPYAMLLSKDTRESLGIELAGAIVVFDEAHNIVEAVNSTYTVEVSSKQLVVARRSLWAYFTKYEKRFQGKNAFYIKQLLAILELLTKFLRR--------LSKSPTAAXXXXXXXXXXXXXXXXXXXXXXXXXXAKMMLINDFLFSAKVDHFNLFKILQYLNESGLAKKLLGFMDAEHAAA--------PAPPVSAAAAAQALSASWID-----------------GELFESRHVSPLRAVEALLKALTSAGGDGRVLAQP--------PNATKAV------------------------EGAIKFIQMNPAVHFEEIVAKARSVILAGGTMQPVAQVIDQLFPFVPRARIDLFSCGHVIPPQNLVGFSLSSGPSQQHLEFTFARRGDTVALDELGRVVLNLARIVPGGIVVFFPSYRF---------------EEAVVARWQATTQFGEIDARKKVFREPKQSDELASVLAQYSAACRP--LPERGNSSGGGGGLAYERAGGASRGAVLLSVVGGKMSEGINFSDELARCVVMVGLPYPNARDAELVEKMAFLDRRSPG----AGRRYYESLCMKAVNQSIGRSIRHQKDYASIVLVDHRYASPAVRKRLPEWIQERVQPPTAAFGHVYAQLVQFY 915
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Match: UPI001C0500B2 (ATP-dependent DNA helicase DDX11 isoform X1 n=2 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C0500B2) HSP 1 Score: 515 bits (1327), Expect = 5.660e-163 Identity = 375/1109 (33.81%), Postives = 543/1109 (48.96%), Query Frame = 1
Query: 115 PFPFEPYDVQKQLMSKIYATLDKGGVGIFESPTGTGKSLSVICSALQWLKDAEARQVDGTSKASASREGGKNASNEDKNASNGXXXXXXXXXXXXSTLPSWLKDLTRQKSENEESERAKRIQSRRHDLENRLGVFRKEQGGRDKSSSSFKKRGGVRNWSSLGSSTKYGGLKVGAGRKRPRPNKAGSLESPEEADSRKNGAGTSPVRRRSDSAEAPEDEEFLLAEYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWGDLGLQQILYVSRTHSQTSQFVNEVKKTAFAQGVRCASLGSRRTLCGNERVSSLGTDGKMRDACLELQKNKREKKIGKAGRKKGRKDEGEGVDKGRTKQKKRAESTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSKG-CPLLAAEGQREFPYRALAAVRDIEELAELGKQEGTCAYYGARKAAALAQLVVMPYAALLSRESRAAMGVRLEGAVVVVDEAHNIVEAINSVHSKKIVLSEIARAHSQLSQYEVRYGARLKGSNAFYVGNILRVLRAMLKFLSKGKDKLRAVRAENSAAATASKAKGGGPGPRAGDAAGEAEEAARSEMTEINEFLFRTGLDNVNLFKLQRYMRRSEISRKVMGFMDLSEACSSQIILQTKPSPSAKDSSNCGRSNAVVSDASPSVQEGGSGGSVPGA---GGAFVSKHVSA--LQIVEGFLDALTNASRDGRILSTFGGKDGGSGTSGTTAKGXXXXXXXXXXXXXXXXXXXXXXEEPSLKFLMLNPSVHFDEIVQKARALVLIGGTMQPTGDLVRQLFSS--LEPSRVEVFSCGHVIPRENLLPLCVSTGPSGKSFNFTFHQRGTDEQLDELGRLMTNVCKLVPGGVVCFLASYGYLDQARATKTQTIETLEADVLQRWKSSGTFRQLNKLKSIFSEPRSAKEVDAVLRDFSVAARAGAWKSTGDGXXXXXXXXXXXXXXXXXXXXXLSVVGAKMSEGINFSDDLARCVVMVGLPYPDKRDAELKQKMAYLDEASPGSNGRA-GREYYSSICMRAVNQSIGRSIRHAGDYASILLVDGRYRNDEVVRLLPGWIAERVAKPANFGQCFVALRRFF 3414
PFP++PY++Q+Q M +Y+ LD+G VGIFESPTGTGKSLS+IC AL WL D E ++ + E + + + S+ ST P W+ D ++K+E + + K RL + +RN + L + K + K + +K +E P + EDEE ++AEY+S XXXXXXXXXX + +I Y SRTHSQ +QFV+EV+K+ F++ + +LGSR+ LC NE V LG+ ++ D C+E+QKNK EK+ + G K+ R G +K CP A ++ L AV DIE L ++G++ +C YY R A AQLVV+PY +L +R A GV+L+G VV++DEAHN+ + ++ +HS ++ +++ RAHSQL+QY RY +RLK N Y+ IL V+ +++ L G + G A +EM IN FLF+ +DN+NLFKLQRY +S +SRK+ GF++ + S + L T+ S + ++ G + + + +Q + VP A G K +SA + VEGF ALTN++ DGR++ GT + E S+KFL+LNP+VHF +++++ RA+++ GGTMQP D ++L S + R+ FSCGHVIP EN+LPL + +GPSG+ +FT+ R + +DE GR+++N+C +VPGGVVCF SY Y + ++ W++SG +L K IF EP+ A +V+ VL +FS + A S G SVVG KMSEGINFSDDL RCVVMVG+PYP+ + EL++KM+YLD P S GR+ G+ ++CM+AVNQSIGR+IRH GDY+SI+L D RY + LP WI R A FG F ALR+FF
Sbjct: 9 PFPYQPYNIQEQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTDYEEKKRQEAAALLQEGEAALSTATQSSATSS-------------STEPDWITDFVQKKAERDLLSKLKXXXXXXXXXXXRLEI--------------------IRNNAQLKYAVKRKSCEDDEAYKLVQLSKEEHVEVPGDQ----------------------EDEELIIAEYESDDESKIKNRFXXXXXXXXXXLVEEH----------------VTKIYYCSRTHSQLAQFVHEVQKSPFSKNISLVTLGSRQNLCINEEVQHLGSVQRINDRCMEMQKNKHEKQHHEEGAKRKR-----------------------------------------------------------GPAKAVCPYNKASALQQMRDEVLGAVHDIEHLLKMGREMQSCPYYATRLAIPPAQLVVLPYQMVLHEATRRAAGVQLKGQVVIIDEAHNLSDTLSCIHSAELTGAQLCRAHSQLTQYADRYKSRLKAKNLMYIKQILFVIEGLVRVL----------------------------GGKVGQNPQNQTTQAGTEMHTINNFLFKAQIDNINLFKLQRYFEKSMVSRKLGGFVE--KYAGSGVTLHTQSSSNKENRRTEGLNRYLQT-----LQSNHNSVPVPLADQQGSPEADKVLSASPMMQVEGFFMALTNSNTDGRVVVH---------RQGTVS-------------------------ESSVKFLLLNPAVHFTQVLKECRAVIIAGGTMQPVSDFKQELLFSAGVGEERITEFSCGHVIPPENILPLVLCSGPSGQELDFTYQNRDSPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRR---------------IISHWEASGVLTRLANKKKIFQEPKKASQVEQVLNEFSRCIQRCALDSGG-----------------LTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMSYLDTHLPHSQGRSPGQALIENLCMKAVNQSIGRAIRHRGDYSSIVLCDRRYSRPATLSKLPAWIRNRTNTCATFGPAFAALRKFF 886 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.35.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.35.3 >prot_P-littoralis_Contig1.35.3 ID=prot_P-littoralis_Contig1.35.3|Name=mRNA_P-littoralis_Contig1.35.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1146bp LVHDVDARGREDEEGECAMNSSSVSGGGGVTSSEEPAIPFPFEPYDVQKQback to top mRNA from alignment at P-littoralis_Contig1:281889..301925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.35.3 ID=mRNA_P-littoralis_Contig1.35.3|Name=mRNA_P-littoralis_Contig1.35.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=20037bp|location=Sequence derived from alignment at P-littoralis_Contig1:281889..301925- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:281889..301925- >mRNA_P-littoralis_Contig1.35.3 ID=mRNA_P-littoralis_Contig1.35.3|Name=mRNA_P-littoralis_Contig1.35.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3438bp|location=Sequence derived from alignment at P-littoralis_Contig1:281889..301925- (Pylaiella littoralis U1_48)back to top |