prot_P-littoralis_Contig148.67.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig148.67.1
Unique Name	prot_P-littoralis_Contig148.67.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	91

Homology

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BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5JZ59_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ59_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.100e-44
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            ME+AGIIEQRASPWGSAVT VAKAD +PRFCVD RAT+NKNLIRKSWPMP+MASHIDTVAGAKYITVCDV SAYHQIP+A  EQD
Sbjct:   12 MEEAGIIEQRASPWGSAVTLVAKADGSPRFCVDYRATINKNLIRKSWPMPEMASHIDTVAGAKYITVCDVQSAYHQIPIAEAEQD 96

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5KHS5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 6.670e-41
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAE-EQD 85
            ME+AGI+EQRASPWGSAVT VAKAD TPRFCVD R TVNK+LIRKSWPMP+MASHIDTVAGAKYITVCDV SAYHQ+P+  + EQD
Sbjct:    1 MEEAGIVEQRASPWGSAVTLVAKADGTPRFCVDYRTTVNKHLIRKSWPMPEMASHIDTVAGAKYITVCDVQSAYHQLPITDKAEQD 86

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5K1J3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J3_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 8.450e-40
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAE-EQD 85
            ME+AGI+EQRASPWGSAVT VAKAD TPRFCVD R TVNK+LIRKSWPMP+MASHIDTVAGAKYITVCDV SAYHQ+P+  + EQD
Sbjct:    1 MEEAGIVEQRASPWGSAVTLVAKADGTPRFCVDYRTTVNKHLIRKSWPMPEMASHIDTVAGAKYITVCDVQSAYHQLPITDKAEQD 86

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5KXQ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ3_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.740e-37
Identity = 64/85 (75.29%), Postives = 72/85 (84.71%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            ME+ GIIEQR S WGSAV  VAKAD TPRFCVD R+T+NKNLIRKSWPMP + SHIDTV GAKYITVCD+ +AYHQ+ + AEEQD
Sbjct:    1 MEKDGIIEQRPSLWGSAVAIVAKADGTPRFCVDYRSTINKNLIRKSWPMPDIESHIDTVGGAKYITVCDIQNAYHQMEIPAEEQD 85

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5JWI2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI2_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 7.990e-34
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            ME   IIEQR S WGSAVT VAKAD TPRFCVD R+T+NK+LIRKSWPMP + SHIDTV GAK+ITVCD+ SAYHQI V   EQ+
Sbjct:    1 MEDEEIIEQRPSSWGSAVTIVAKADGTPRFCVDYRSTINKSLIRKSWPMPDIESHIDTVGGAKFITVCDIQSAYHQIEVDEAEQE 85

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5L1A0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A0_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.380e-33
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            ME   IIEQR S WGSAVT VAKAD TPRFCVD R+T+NK+LI+KSWPMP + SHIDTV GAK+ITVCD+ SAYHQI V   EQ+
Sbjct:  189 MEDEEIIEQRPSSWGSAVTIVAKADGTPRFCVDYRSTINKSLIQKSWPMPDIESHIDTVGGAKFITVCDIQSAYHQIEVDEAEQE 273

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5KKE6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.270e-32
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 0

Query:    1 MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            ME   IIEQR S WGSAVT VAKAD TPRFCVD R+T+NK+LIRKSWPMP + SHIDTV GAK+ITVCD+ SAYHQI V   EQ+
Sbjct:  189 MEDEEIIEQRPSSWGSAVTIVAKADGTPRFCVDYRSTINKSLIRKSWPMPDIESHIDTVGGAKFITVCDIQSAYHQIEVDEAEQE 273

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5K3U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U6_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 7.930e-24
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 0

Query:    5 GIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            GIIE+R SPWGS  T VAK++ +PRFCVD R T+N+N+IRK+WPMP + S +D V  A YITV D+ SA+ QIPVA E  D
Sbjct:   49 GIIEKRPSPWGSPCTIVAKSNGSPRFCVDYRHTLNRNIIRKTWPMPNLESCLDAVGDALYITVADILSAFWQIPVAEEHVD 129

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5K563_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K563_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 7.590e-23
Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 0

Query:    6 IIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPV 79
            IIE+  S WGS VT VA+ D  PRFCVD R+TVNK+LIRK+WP+  M S++D+V  AK+I+V DV SAY QIPV
Sbjct:  135 IIEELPSQWGSPVTLVARKDGKPRFCVDFRSTVNKHLIRKTWPLANMESNLDSVGSAKFISVADVQSAYWQIPV 208

[Close]

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Match: A0A6H5JHS5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS5_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.140e-22
Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 0

Query:    5 GIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMPKMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQD 85
            GIIE+R SPWGS  T VAK++ +PRFC+D R T+N+N+IRK+ PMP + S +D V  A YITV D+ SA+ QIPVA E  D
Sbjct:   49 GIIEKRPSPWGSPCTIVAKSNGSPRFCIDYRHTLNRNIIRKTCPMPNLESCLDAVGDALYITVADILSAFWQIPVAEEHVD 129

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig148.67.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JZ59_9PHAE	1.100e-44	87.06	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KHS5_9PHAE	6.670e-41	82.56	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K1J3_9PHAE	8.450e-40	82.56	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KXQ3_9PHAE	2.740e-37	75.29	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JWI2_9PHAE	7.990e-34	72.94	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L1A0_9PHAE	2.380e-33	71.76	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKE6_9PHAE	1.270e-32	72.94	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K3U6_9PHAE	7.930e-24	60.49	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K563_9PHAE	7.590e-23	62.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHS5_9PHAE	3.140e-22	58.02	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..88 e-value: 8.5E-11 score: 43.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig148	contig	P-littoralis_Contig148:285745..286017 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig148.67.1	mRNA_P-littoralis_Contig148.67.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig148 285705..286355 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig148.67.1 ID=prot_P-littoralis_Contig148.67.1|Name=mRNA_P-littoralis_Contig148.67.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp
MEQAGIIEQRASPWGSAVTSVAKADCTPRFCVDLRATVNKNLIRKSWPMP
KMASHIDTVAGAKYITVCDVPSAYHQIPVAAEEQDNADTT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043502	DNA/RNA_pol_sf