mRNA_P-littoralis_Contig148.59.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig148.59.2
Unique NamemRNA_P-littoralis_Contig148.59.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: D7G7S9_ECTSI (Oxidoreductase family, NAD-binding Rossmann fold protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7S9_ECTSI)

HSP 1 Score: 629 bits (1623), Expect = 1.630e-218
Identity = 302/360 (83.89%), Postives = 333/360 (92.50%), Query Frame = 2
Query:  293 MKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            MKE MPE+EFVGYHDPQP FL+KIGEDVP F+ V EM+ +TKPDL FVGSPNNFHL+HIKAGLAAGVRVFTEKPVVISE+ETLELAALLK+HG DR+MVGLVLRYS+HM DLRAVL  LGP+VSLEANEHI PYHGAFFMRDWRRLSKLSGGFMLEKCCHDLD+YNM+TGSRP+KVASFGGK+SY+PE+APA+ET EDGIM +KESVWN VDDAF +D DIIDHQTAIL+YETGAS+AFHTNLNVPDEHRRFCVMG  GM+EGDFVRGYLKAT RDG++IADHDY  +D  K +AHYGAD LM+ADVAAFLRGEA++LPVGIVDALEAGLVAIALD+ARVSGEMVDMSETWAA DAFGLR
Sbjct:    1 MKEKMPEIEFVGYHDPQPAFLSKIGEDVPPFDSVEEMLRETKPDLFFVGSPNNFHLEHIKAGLAAGVRVFTEKPVVISEQETLELAALLKEHGPDRVMVGLVLRYSKHMSDLRAVLGKLGPVVSLEANEHIGPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDIYNMMTGSRPVKVASFGGKKSYLPEYAPASETKEDGIMHTKESVWNGVDDAFRSDSDIIDHQTAILQYETGASMAFHTNLNVPDEHRRFCVMGARGMIEGDFVRGYLKATLRDGSIIADHDYNDLDEAKKAAHYGADDLMVADVAAFLRGEAIELPVGIVDALEAGLVAIALDRARVSGEMVDMSETWAAFDAFGLR 360          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A126V4N7_9RHOB (Oxidoreductase n=1 Tax=Falsihalocynthiibacter arcticus TaxID=1579316 RepID=A0A126V4N7_9RHOB)

HSP 1 Score: 597 bits (1538), Expect = 1.990e-205
Identity = 286/378 (75.66%), Postives = 334/378 (88.36%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            M+VVTAGIGLRAGHVL+I+KETMPE+EFVGY+DPQPT+L  IGEDV  F+ V +++ +TKPDL FVGSPN+FHL+HIK GLAAGVR+FTEKPVV ++E+T+ELA LL +HG D++MVGLVLRYSQHMVDLRA+L  LGPI SLEANEHIAPYHGAFFMRDWRR+ K SGGFMLEKCCHD+D+YNMVTGSRP +VASFGG++S+VPEFAP + T E+ IM  K S W SV DAF++D DIID+QTAIL+YETGAS+AFHTNLN PDEHRRFCVMG LGM EGDFVRGYLKATARDG  IADHDYTK DP KMSAHYGADH+M++D+AAFLRGE   LPVG+VDALEAGLVA+ALD+AR++G MVD+SETWA  D++ LR
Sbjct:    1 MRVVTAGIGLRAGHVLSILKETMPEIEFVGYYDPQPTYLHMIGEDVLRFDDVADILAQTKPDLFFVGSPNSFHLEHIKLGLAAGVRIFTEKPVVTTKEDTMELAELLAKHGSDQVMVGLVLRYSQHMVDLRAILDRLGPITSLEANEHIAPYHGAFFMRDWRRMIKWSGGFMLEKCCHDIDIYNMVTGSRPTRVASFGGRKSFVPEFAPTSNT-ENEIMHRKTSAWESVPDAFHSDGDIIDYQTAILQYETGASMAFHTNLNTPDEHRRFCVMGALGMAEGDFVRGYLKATARDGETIADHDYTKGDPAKMSAHYGADHMMVSDIAAFLRGETKSLPVGVVDALEAGLVAMALDQARIAGGMVDLSETWAEFDSWKLR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A238LB64_9RHOB (Putative oxidoreductase YteT n=1 Tax=Flavimaricola marinus TaxID=1819565 RepID=A0A238LB64_9RHOB)

HSP 1 Score: 596 bits (1536), Expect = 3.980e-205
Identity = 283/378 (74.87%), Postives = 334/378 (88.36%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            MKVVTAGIGLRAGHVL+IMKE MPE+EFVG++DPQPT+L  IG DVP F+ V +M+E T+PDL FVGSPN+FHL+HIK GLAAGVR+FTEKPVV ++++T+ELA+LL +HG DR+MVGLVLRYSQHMVDLRAVL  LGPIVSLEANEHI PYHGAFFMRDWRR+ K SGGFMLEKCCHDLD+YNMVTGSRP +VASFGG++S+VP+ AP + T E+ IM  K SVW SVDDAF++D DIID+QT+IL YETG+SLAFHTNLNVPDEHRRFC+MG  GMVEGDFVRGYLKATARDG+++ADHDYTK DP K SAHYGADH+M+ D+AAFLRGE   LPVG+VDALEAG+VA+ALD+AR++G MVD++E WA  D++ LR
Sbjct:    1 MKVVTAGIGLRAGHVLSIMKEAMPEIEFVGFYDPQPTYLHMIGTDVPRFDEVAQMLEDTQPDLFFVGSPNSFHLEHIKVGLAAGVRMFTEKPVVTTKDDTMELASLLAEHGTDRVMVGLVLRYSQHMVDLRAVLPQLGPIVSLEANEHIGPYHGAFFMRDWRRMVKWSGGFMLEKCCHDLDIYNMVTGSRPDRVASFGGRKSFVPQHAPTSNT-ENEIMHRKTSVWESVDDAFHSDGDIIDYQTSILHYETGSSLAFHTNLNVPDEHRRFCIMGAKGMVEGDFVRGYLKATARDGSILADHDYTKGDPAKQSAHYGADHMMVGDIAAFLRGETDSLPVGVVDALEAGIVAMALDEARITGRMVDLTEDWAQFDSYALR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A2T7FX64_9RHOB (Oxidoreductase n=1 Tax=Thalassorhabdomicrobium marinisediminis TaxID=2170577 RepID=A0A2T7FX64_9RHOB)

HSP 1 Score: 593 bits (1528), Expect = 6.430e-204
Identity = 286/378 (75.66%), Postives = 331/378 (87.57%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            M+VVTAGIGLRAGHVL+I+KE MPEVEFVGY+DPQPT L  IG D+P FE V +M+ + KPDL FVGSPN+FHL+HIKAGL AGVR+FTEKPVV ++EET+ELAALL +HG DR+MVGLVLRYSQHMVDLR VL  LGP+VSLEANEHI PYHGAFFMRDWRR+   SGGFMLEKCCHDLD+YNMVT SRP +VASFGG++S+VPE AP +   E+ IM  K+SVWNSVDDAF++D DIIDHQTAIL Y++GASLAFHTNLNVPDEHRRFCVMGT GM EGDFVRGYLKATARDGTV+ADHDY+++D  + SAHYGADH+M+ D+AAFLRG+A  LPVG+VDALEAGLVA+ALD+AR+SG MVD++  WA  DAFGLR
Sbjct:    1 MRVVTAGIGLRAGHVLSILKEAMPEVEFVGYYDPQPTHLEMIGTDIPRFEAVEDMLAQAKPDLFFVGSPNSFHLEHIKAGLDAGVRIFTEKPVVTTKEETMELAALLAEHGTDRVMVGLVLRYSQHMVDLRRVLDDLGPVVSLEANEHIGPYHGAFFMRDWRRMVHWSGGFMLEKCCHDLDIYNMVTNSRPTRVASFGGRKSFVPENAPTSNA-ENEIMHRKKSVWNSVDDAFHSDGDIIDHQTAILHYDSGASLAFHTNLNVPDEHRRFCVMGTHGMAEGDFVRGYLKATARDGTVLADHDYSQMDSARASAHYGADHMMVDDIAAFLRGDADSLPVGVVDALEAGLVAMALDEARISGGMVDLAPVWAEFDAFGLR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A5B9ENV4_9RHOB (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A5B9ENV4_9RHOB)

HSP 1 Score: 591 bits (1524), Expect = 2.590e-203
Identity = 280/378 (74.07%), Postives = 332/378 (87.83%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            MKVVT+GIGLRAGHVL+I+++ +PEVEFVGY+DPQPTFL  IGED P F+ V +M+  T+PDL FVGSPN+FHLDHIK GLAAGVR+FTEKPVV ++E+T+ELAALL +HG D++MVGLVLRYSQHMVDLRAVL  LGPIVSLEANEHI PYHGAFFMRDWRR+ K SGGFMLEKCCHD+D+YNMVTG+RP +VASFGG++S+VPEFAP + T E+ IM  K SVW S+DD F +D DIID+QTAIL Y+TGASLAFHTNLNVPDEHRRFCVMG LGM EGDFVRGYL+AT RDGTVIADHDYT++D  + SAHYGADH+M+ D+AAFLRGE   LPVG+VDALEAGL A+ALD+AR++G M+D+++TWA  D++GLR
Sbjct:    1 MKVVTSGIGLRAGHVLSILRDAIPEVEFVGYYDPQPTFLHMIGEDTPRFDDVAQMLADTQPDLFFVGSPNSFHLDHIKLGLAAGVRIFTEKPVVTTKEDTMELAALLAKHGTDQVMVGLVLRYSQHMVDLRAVLDRLGPIVSLEANEHIGPYHGAFFMRDWRRMIKWSGGFMLEKCCHDIDIYNMVTGARPNRVASFGGRKSFVPEFAPTSNT-ENEIMHRKPSVWESIDDPFRSDGDIIDYQTAILHYDTGASLAFHTNLNVPDEHRRFCVMGALGMAEGDFVRGYLRATLRDGTVIADHDYTQMDGARASAHYGADHMMVDDIAAFLRGEVGSLPVGVVDALEAGLAAMALDQARITGTMIDLTDTWAEFDSYGLR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A7X6FYQ6_9RHOB (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A7X6FYQ6_9RHOB)

HSP 1 Score: 577 bits (1488), Expect = 7.030e-198
Identity = 276/378 (73.02%), Postives = 328/378 (86.77%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            M+VVTAGIGLRAGHVL+I+KE MPEVEFVG++DPQPT L  IG +VP ++ V  M+ +T PDL FVGSPN+FHL+HIK GLAAGVR+FTEKPVV ++EET+ELAALL +HG D +MVGLVLRYSQHMVDLR VL  LGPI SLEANEHIAPYHGAFFMRDWRR+ + SGGFMLEKCCHD+D+YNMVT SRP +VASFGG++S+VP FAPA+ T E+ IM  K+SVW S+DD F++D DIID+QTAIL+YE+GASL+FHTNLNVPDEHRRFCVMG LGM EGDFVRGYLKATARDG+VIADHDYT++D  + SAHYGADH+M+ D+ AFL+GE   LPVG+VDALEAGLVA+ALD+AR+ G+M++M+  WA  D FGLR
Sbjct:    1 MRVVTAGIGLRAGHVLSILKEAMPEVEFVGFYDPQPTHLEMIGTEVPQYDTVETMLAETAPDLFFVGSPNSFHLEHIKIGLAAGVRIFTEKPVVTTKEETMELAALLAEHGTDSVMVGLVLRYSQHMVDLRRVLDQLGPITSLEANEHIAPYHGAFFMRDWRRMVQWSGGFMLEKCCHDIDIYNMVTSSRPSQVASFGGRKSFVPAFAPASNT-ENEIMHRKKSVWQSIDDPFHSDGDIIDYQTAILQYESGASLSFHTNLNVPDEHRRFCVMGALGMAEGDFVRGYLKATARDGSVIADHDYTQMDSARASAHYGADHMMVDDIVAFLKGETDTLPVGVVDALEAGLVAMALDEARIDGKMINMAPVWAEFDKFGLR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A2P8FDH2_9RHOB (Putative dehydrogenase n=1 Tax=Shimia abyssi TaxID=1662395 RepID=A0A2P8FDH2_9RHOB)

HSP 1 Score: 576 bits (1485), Expect = 1.990e-197
Identity = 275/377 (72.94%), Postives = 323/377 (85.68%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGL 1369
            M+VVTAGIGLRAGHVL+I+KET+PEVEFVG++DPQPTFL KIG++ P ++ V  M+ + KPDL FVGSPN FHL+HI  GL AGVR+ TEKPVV + +ET++LA LL  HG D++MVGLVLRY+QHMVDLRAVL  LGPIVS+EANEHIAPYHGAFFMRDWRR+ + SGGFMLEKCCHDLD+YNMVTGSRP++VASFGG++S+VPE AP + T E+ IM  K SVW SVDD F +D DIIDHQTA+L++E GAS+ FHT+LN PDEHRRFCVMG LGM EGDFVRGYLKATARDG+VIADHDYTK+D    SAHYGADHLM+ D+ AFL+GE   LPVG+VDAL+AGLVA+ALD+ARVSG +VDMSETWA  D FGL
Sbjct:    1 MRVVTAGIGLRAGHVLSILKETLPEVEFVGFYDPQPTFLEKIGDETPRYDDVATMLAEAKPDLFFVGSPNAFHLEHITLGLEAGVRMLTEKPVVTTRDETMQLAKLLSDHGTDQVMVGLVLRYAQHMVDLRAVLDQLGPIVSMEANEHIAPYHGAFFMRDWRRMVRWSGGFMLEKCCHDLDIYNMVTGSRPVRVASFGGRKSFVPELAPTSNT-ENEIMHRKASVWESVDDPFQSDGDIIDHQTALLQFEDGASMTFHTSLNTPDEHRRFCVMGALGMAEGDFVRGYLKATARDGSVIADHDYTKMDQKHASAHYGADHLMVRDIVAFLKGETEALPVGVVDALQAGLVAMALDEARVSGGVVDMSETWAEFDRFGL 376          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: UPI001ADA61A1 (Gfo/Idh/MocA family oxidoreductase n=4 Tax=unclassified Shimia TaxID=2630038 RepID=UPI001ADA61A1)

HSP 1 Score: 576 bits (1484), Expect = 2.820e-197
Identity = 271/378 (71.69%), Postives = 329/378 (87.04%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            M+VVTAGIGLRAGHVL+I+KE MPEV+FVG++DPQPT L  IG DVP F+ V  M+ +  PDL FVGSPN+FHL+HIKAGLAAGVR+FTEKPVV ++EET+ELAALL +HG D +MVGLVLRYSQHMVDLR VL  +GPI S+EA+EHIAPYHGAFFMRDWRR+ + SGGFMLEKCCHDLD+YNMVT SRP +VASFGG+RS+VP+FAP +   E+ IM  K+SVW SV+D F++D DIIDHQTAIL YE+GAS++FHTN+NVPDEHRRFCVMG LGM+EGDF+RG+++ATARDGTVIADHDYT+++  + SAHYGADH+M+ D+ AFL+GE+  LPVG+VDALEAGLVA+ALD+AR++G M+DM+ TWA  D FGLR
Sbjct:    1 MRVVTAGIGLRAGHVLSILKEAMPEVKFVGFYDPQPTHLEMIGTDVPRFDDVETMLTEASPDLFFVGSPNSFHLEHIKAGLAAGVRIFTEKPVVTTKEETMELAALLAEHGTDSVMVGLVLRYSQHMVDLRRVLDQIGPITSIEASEHIAPYHGAFFMRDWRRMVRWSGGFMLEKCCHDLDIYNMVTASRPNRVASFGGRRSFVPDFAPTSNA-ENEIMHRKKSVWQSVEDPFHSDGDIIDHQTAILHYESGASMSFHTNINVPDEHRRFCVMGALGMIEGDFMRGFVRATARDGTVIADHDYTQMEAARASAHYGADHMMVDDIVAFLKGESDSLPVGVVDALEAGLVAMALDEARINGSMIDMAPTWAEFDTFGLR 377          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: A0A1M5T4Y7_9RHOB (Predicted dehydrogenase n=1 Tax=Cognatiyoonia sediminum TaxID=1508389 RepID=A0A1M5T4Y7_9RHOB)

HSP 1 Score: 572 bits (1475), Expect = 6.440e-196
Identity = 271/379 (71.50%), Postives = 328/379 (86.54%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLRR 1375
            M+VVTAGIGLRAGHVL+++KE+MPEVEFVGY DPQPTFL  IGED+P F+ V  M+ +TKPDL FVGSPN+FHL+HIK GL AGVR+FTEKPVV ++E+T+ELAALL +HG D +MVGLVLRYSQHM+DLRA L +LGPIVSLEA+EHIAPYHGAFFMRDWRR+ + SGGFMLEKCCHD+D+YNMVT SRP  VASFGG++S+VP+FAP +  VE+ IM  K SVW SVDD F++D DIIDHQTAIL+YE GASLAFHTNLNVPDEHRRFCVMG LGM EGDFVRG L+ T RDG+V+ADHDYT++D  + SAHYGADH+M+ ++ +FL+GEA  LPVG+VDALEAGL A+A+D+AR++G +VD++ETWA  D + LR+
Sbjct:    1 MRVVTAGIGLRAGHVLSLLKESMPEVEFVGYFDPQPTFLHMIGEDIPRFDDVETMLAQTKPDLFFVGSPNSFHLEHIKQGLDAGVRIFTEKPVVTTKEDTMELAALLAEHGTDSVMVGLVLRYSQHMIDLRANLDVLGPIVSLEASEHIAPYHGAFFMRDWRRMIRWSGGFMLEKCCHDIDIYNMVTKSRPKSVASFGGRKSFVPQFAPTSN-VENEIMHRKPSVWESVDDPFHSDGDIIDHQTAILQYENGASLAFHTNLNVPDEHRRFCVMGALGMAEGDFVRGNLQVTLRDGSVVADHDYTQMDSARASAHYGADHMMVDEIVSFLKGEAETLPVGVVDALEAGLAAMAMDEARITGRVVDLTETWAEFDGYALRQ 378          
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Match: UPI000D55AAA5 (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Loktanella sp. Alg231-35 TaxID=1922220 RepID=UPI000D55AAA5)

HSP 1 Score: 572 bits (1475), Expect = 6.440e-196
Identity = 270/378 (71.43%), Postives = 324/378 (85.71%), Query Frame = 2
Query:  239 MKVVTAGIGLRAGHVLAIMKETMPEVEFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDHIKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQHMVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKCCHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVWNSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTLGMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVAAFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFGLR 1372
            MKVVTAGIGLRAGHVL+I+KE MPEV FVGY+DPQPT+L  IG   P F+ V  M+ +TKPDL FVGSPN+FHL+HIK GL AGVR+FTEKPVV ++++T+ELAALL +H  + +MVGLVLRYSQHMVDLR VL  LGP+VSLEANEHI PYHGAFFMRDWRR+ K SGGFMLEKCCHD+D+YNMVTGSRP KVASFGG++S+VPEF+P + T E+ IM  K+SVW +VDD F +D DIIDHQTAIL YE GASLAFHTNLNVPDEHRRFCVMG LGM EGDFVRG+LKATARDGTV+A+HDYT++D  + SAHYGADH+M+ D+ AFL G+   LPVG+VDALEAGL A+A+D+AR++G++VD+++TW   D++GLR
Sbjct:    1 MKVVTAGIGLRAGHVLSILKEAMPEVAFVGYYDPQPTYLEMIGTQTPRFDDVEAMLAETKPDLFFVGSPNSFHLEHIKIGLKAGVRIFTEKPVVTTKQDTMELAALLAEHSTNSVMVGLVLRYSQHMVDLRTVLDQLGPVVSLEANEHIGPYHGAFFMRDWRRMIKWSGGFMLEKCCHDIDIYNMVTGSRPSKVASFGGRKSFVPEFSPTSNT-ENEIMHRKKSVWENVDDPFRSDGDIIDHQTAILHYENGASLAFHTNLNVPDEHRRFCVMGALGMAEGDFVRGHLKATARDGTVLANHDYTQMDAARASAHYGADHMMVDDIVAFLTGKTDSLPVGVVDALEAGLAAMAIDEARITGQIVDLTDTWTEFDSYGLR 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S9_ECTSI1.630e-21883.89Oxidoreductase family, NAD-binding Rossmann fold p... [more]
A0A126V4N7_9RHOB1.990e-20575.66Oxidoreductase n=1 Tax=Falsihalocynthiibacter arct... [more]
A0A238LB64_9RHOB3.980e-20574.87Putative oxidoreductase YteT n=1 Tax=Flavimaricola... [more]
A0A2T7FX64_9RHOB6.430e-20475.66Oxidoreductase n=1 Tax=Thalassorhabdomicrobium mar... [more]
A0A5B9ENV4_9RHOB2.590e-20374.07Gfo/Idh/MocA family oxidoreductase n=2 Tax=Rhodoba... [more]
A0A7X6FYQ6_9RHOB7.030e-19873.02Gfo/Idh/MocA family oxidoreductase n=2 Tax=Rhodoba... [more]
A0A2P8FDH2_9RHOB1.990e-19772.94Putative dehydrogenase n=1 Tax=Shimia abyssi TaxID... [more]
UPI001ADA61A12.820e-19771.69Gfo/Idh/MocA family oxidoreductase n=4 Tax=unclass... [more]
A0A1M5T4Y7_9RHOB6.440e-19671.50Predicted dehydrogenase n=1 Tax=Cognatiyoonia sedi... [more]
UPI000D55AAA56.440e-19671.43Gfo/Idh/MocA family oxidoreductase n=1 Tax=Loktane... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:259759..267167 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog391626.OAN307_c43280
PFAMsGFO_IDH_MocA,GFO_IDH_MocA_C
Model size2582
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.23e-194
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria,1QSNV@1224|Proteobacteria,2TRYY@28211|Alphaproteobacteria
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-06_000430.1
Descriptionoxidoreductase
Cds size1212
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789698.8489132-UTR-P-littoralis_Contig148:259758..2609621680789698.8489132-UTR-P-littoralis_Contig148:259758..260962Pylaiella littoralis U1_48UTRP-littoralis_Contig148 259759..260962 -
1680789698.9110777-UTR-P-littoralis_Contig148:267001..2671671680789698.9110777-UTR-P-littoralis_Contig148:267001..267167Pylaiella littoralis U1_48UTRP-littoralis_Contig148 267002..267167 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789698.864981-CDS-P-littoralis_Contig148:260962..2615471680789698.864981-CDS-P-littoralis_Contig148:260962..261547Pylaiella littoralis U1_48CDSP-littoralis_Contig148 260963..261547 -
1680789698.877314-CDS-P-littoralis_Contig148:261900..2624681680789698.877314-CDS-P-littoralis_Contig148:261900..262468Pylaiella littoralis U1_48CDSP-littoralis_Contig148 261901..262468 -
1680789698.8913844-CDS-P-littoralis_Contig148:266942..2670011680789698.8913844-CDS-P-littoralis_Contig148:266942..267001Pylaiella littoralis U1_48CDSP-littoralis_Contig148 266943..267001 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.59.2prot_P-littoralis_Contig148.59.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig148 260963..267001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig148.59.2

>prot_P-littoralis_Contig148.59.2 ID=prot_P-littoralis_Contig148.59.2|Name=mRNA_P-littoralis_Contig148.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=404bp
MRVYSPPMGRVYDVRRRTRRCCVPMKVVTAGIGLRAGHVLAIMKETMPEV
EFVGYHDPQPTFLAKIGEDVPAFEGVVEMIEKTKPDLLFVGSPNNFHLDH
IKAGLAAGVRVFTEKPVVISEEETLELAALLKQHGVDRLMVGLVLRYSQH
MVDLRAVLKMLGPIVSLEANEHIAPYHGAFFMRDWRRLSKLSGGFMLEKC
CHDLDLYNMVTGSRPIKVASFGGKRSYVPEFAPAAETVEDGIMRSKESVW
NSVDDAFNNDCDIIDHQTAILKYETGASLAFHTNLNVPDEHRRFCVMGTL
GMVEGDFVRGYLKATARDGTVIADHDYTKIDPTKMSAHYGADHLMIADVA
AFLRGEAVDLPVGIVDALEAGLVAIALDKARVSGEMVDMSETWAALDAFG
LRR*
back to top

mRNA from alignment at P-littoralis_Contig148:259759..267167-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig148.59.2 ID=mRNA_P-littoralis_Contig148.59.2|Name=mRNA_P-littoralis_Contig148.59.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7409bp|location=Sequence derived from alignment at P-littoralis_Contig148:259759..267167- (Pylaiella littoralis U1_48)
TAGCAGACCTACCTTTAGGTGAGCTCTCAAACCTCGAAACTCCAGGTAGG ACTTGATCTCGTGCTAAGGCCTCGCCGCCAATACTACAAACGCGTGAGGG GAAACAGAAGGTCGGAGAGATATCGCCTGCTGTGGGTGTAATCCCCATGA TCACTTGTGTGAGAGTATGCGTGTGTACTCCCCGCCGATGGGGCGTGTGT ACGATGTACGCCGCAGGACAAGAAGGTAGGATTGGCATGGTTACCCAAAA TCAGATCAATGTACGTAGTAGCGTGGTCGCACGGCAGCAGCCGTAGTGCA ATGTAGTGGTAGTCATAAAGAGGGCAAAACATGGGCGCCGACAGCACTAG TTGTCGATTGATTCAGGAAGAACGAATTGTAAGTCACCAGTTCTTTTTTG CTTCTCATCCTCTAGTCGATCTATTGAATCAACAACTTGAGATCTAGACT ATGACTGCTGTATCGCGAAACAACAGCAGTAGTAGACGTGCCTCAATTAT GAGTAACGAACCGCGGTCGAGGCCTGGCTTATGCGTTGCAATAGTCTGCC TGGAATGATGTGCGATGGTAAAAGAAGGCTTGCACCACAAAGGTGTGCTG TTATTTTGGAAGGCAAAAAAGAAAAGGGAACACACGCAACCTGCCTCCTG TGTCACCCCGGCTGGTGCGCCCAAGTTGTACCGAGAGGCGCAGACTGGTA CAGAACAGATCGAATAGATGGGATGACATCACACACACTACAGTACCGGC CCGCTCATAAGAAACACCTACATGAGAAAGCGAGGCGGGAATTTTTCAAA AATTAAGAAGTTTGGCGTAAGAAAGTGGGCTCGGCAGCCGGCGCTAGATT AAATCCTATACGATGGTTAAGAAATAGCCATACTGTTGGTGATAGAACAA GAAGCCAAGGCTTGAGGCTGATTTCCAGTTTCTTATAAGCAGGCCGGTAC TGTAGCAACACAAACACACCCGGGTACAGTATGGAGTTCGGACTTCGCAG ATATCCTCGAACAAATCCATGAAACGCCTGGTTTGTTTTATTTTCAAACT CTCTCAAGTATGATACGAGTACGTATTCAATAGGAATTTACAAAAATACC ATCGCAGATTTCTCCCAGGAAGCAGAAGATGTTGCGAGCTAATTGGAGCT CTTAGGATCCAAGTTGTTGCAGCGTACTACAGCTTCGCTGTACAGTCGTC CCCGCTTTAAGGACACTAATCTTAAGGAAACTCCCCGCTGTAAGGATACA TTTTTTTCCCAGAACATGGTGCCCCGCAGATATACAATAATAGGGGGGGT ACCTTTTCCACTACGCGGCCCCCCCATTTTTTTGCGGGGCAGCACACCTG TACAGCAGTACATATAGCATCGACAGCGGTCTGCTGCAGCCCGCACTACT GCGTGTGGGTATGGAGAGATTCCTCCCATCTGCTGGCGGGTCGTCAGCTG CCGGCTTGAAGCCATGTGGCGAACCCACGTGCCAGTCAAAGTCTACTCTC GTGTCAGGGGTTCACCAGTGCCCGTGCGGGCGATTCATGCACGCGTTTTG TGGTCGGGGCATCGGAGGGGAAGGCTTCTAACCCTAGTGTGGCGGCCTTC CAACGCGTGTTGTCGTAGTTTAAAGCAACACAGCAGCACAGCAGTAGTTT CGTGGTCGCATTCCTGCTTCAAATGCGCGTATTTTGACACATGTTACACC TCCATTGGCCCCGGGGATGGTGAGTTAGTGGCCCCGGAATCTTAAGGACA CTTCCCCGCGTTAAGGACACTCCAAAAAAAAAAAAACGCGGTGTGTCCTT AAAGCGGGGTCGACTGTATATGATTCCTGAAACGAACAGCAGTCCTTTGT CGATATCTGTGAGCTTCGAGCAGCTCGAATGCTCCCACTCTGTATAGCGG CGATACTTTTTAACCTTTCCTGGACACGCCCGCAGGTACTCAAGCACGCT CTCGTCCAATTTTTCAGTAACTTTTGAAGTTCCATGTCCAGGAACCGTTC AAGAACATGGCCGCTACAGCAGTGCGGCATCTGAGCTTCTCCTTGTAGCC CACAGAACTCGGTGAAGGAAAGTTTGTTCCAGGAATCACGGACGGCGAAC CTGCAATGTAGGTCACAAGGACTTGGACCTAGCCACTCCAAGTAACTTTC AGCGACTGCGCTTGGGCGAAATCTGGGATGGTTTTACATACGAGTATTGG TATGATACTAACATATGAGTTCGGAAAACCAAAATTGTGAGGAAATGCCT GTGCACGAAGTCCGGAACCCATCCCTGGGTGGCCTTAACCCTTTGAGCAC CCAAGCGGGTTCGAAAAAATATACTTCGTATATGAGTGCCAAAATAACCA ACTTTGTGCGCCGATGATCGGGCCGTGGTGCACGGTCCTTGAAAAAGAAA CGCGCGTCAGGCTTACGCCCCTCTTCACAAAAGGGCGACTTGATTATACA GTGGAATCTCTGTCCCCATTTGCCCCCCAGTAAAAGGGTGCTCGGCTAGA CAAAATGTCCTGGGTAAGGTTTTGCAGCAGGTTGCTGCAGCATTTGCGAG GGATCACACAGCAGCACAGCAACACCACTAGCGAGTATGGCGAGGCCCAA GGTAACCCGCACGTCATTCACATGTCATAGCAGCAGCACCAGACCACCTA GTATGGCGGACCAGGATTTCCCGCACCCCGCACGAAGTTCACAAGGCAAA TTTTGTCGGGATGTGGCAACCCATGACTGGTTCTCACACAGTCCTGGACC ACGGGCGGCGTAAAAAAACAATAACAGGATTAATCGTGTGCGCACGCACA CAGGAGATATCGTACCTCGAGATCGCCCAGACATAAAGTCCCAGTCACTG AAGATTGCAGGTATCCCCAAATCTTTCCCATTTGGGTTTCCAGTAGCTAA AAGGTTAAACTAGGATGTTGTGATGACCTTCATAAAGGGTACACCTCCAC AAACGTCTGTCGTAGACAGACCCCTCTTTTCAACACTGGTGTTTACGGTG AGGACGTCTCACCAAGGTTTGTTGTGGCTCTCCGCCACACTCCATGAAAT TTTCCAGATTTCCAAGGCAAAACACAAGGAGAAACATGAAATGCATGACA GAGGGCCGAAGGGCAGAGATGTTTCGAACCGCAGATACGTTTGGTGACAT GGCAGACGGAGCAAACCCACACGAACACACGCAAAATATTGTGGAGGAAA AGGGGACCATTCGCCAGCCGTTCGGGTTCCGGTAACGCCCCTTGAAGACG TATCGAATACGTGAACAAAATGTTAATAACGGGGGCGGGGGGTAGATTAC ACTCCAACAGGGCACCACCAGTGTTTTTATCGGAGACAACTTTTTGGGCA TGGTCGGAGCGTTCGCGAACACGGGGGGGTGCGAGGTGACACTCGCGAGT AGGAAGGGCGTGTTTATGCAGCATCCAAAAAAACGAAACATGCCAAAGAA TAAGGTAACGCCCGCCCCTCGTCGGGATACCTTTTTCGTCGTTCGTTGAT ATGCGCACAAAACAACGTGTCACCAAAGCATACCCACTGAACGCACCGGA CAAGCCTTCAGCTTGCTTGCCGCTATTGCCACCCATTTTGGGGCATATCT CTCGTGGTCTATGTCGCCAAAGGACGCGCCTTCACGTCACCCTCAAGCGC ACTGCATCAACGGTGTTCGTTAAACAAGCACGCCTGCGCCGTGGAAGATC CGCCTGTCTGTTGGCATAGAAATCCACCCGTCGTTGTGGGAGTCGCACGC CGTACAGCAATGTTGAGCCTCAGTGTGTTGTGGGCCATAGCCTTCATCAT ACTTCATGAAAAAAAGTGCTCGAGCTGCCAAAAATCTGCAAGAAGAGGCT CTTCGTCTGAGGGAAATGAGGGAAACAGCCATATTTCGGACCTTTATCAA GTAAACTTTTCAGGTCGCCACTCGATTTTAAATTTTGACGAAACAAGATG GAAGCACGTTACGTCCCAAGGCCAATATTGAGTCATTGGCCATTTTTTGA GGATATGATACGAGCTCGACTTGTGTCGTTCGCCCTCTGGGTGTCAAAGC CCTCGCGATGTGAGGGCGGTGGCCGGGCGCAAGCCTCAAAGGGAGCGCCC TTACCAGAAGCTATGTATCGGGCCATCTGCAGCGAGCAGCAGTCGAGCCA GCAAGAACAACACGTCTCCAGGTACAGACATTTTTCACAGGCAACTTTTC ACACATCTAGAAAAAAGTTGGCCAGAATTACCTGCCGGCCACCCCCAAGT TCAAGCACAATCTCCAGCTTCACAGATTTTACCAATGAGCACGCATACCC GGCCGATTTCTCGGCCTGTGGTCAATGCTGCTGCTGCTGCTGCTGTTCAA TACAGCAGGTCACTTGCGACACACTTGTTGCAATCGTGCGTGAATCAAGA CTCCATCCCAGTCTCGTGCATCCCGTAACAATGAATGACTTCACCAGCGC GTGGAGTAGAAGCTTCATTTCAAAGCGTGGTACTGCCGGGAGGGGAATGC GATTATTTTGATCTCATGTCGGCCACCGAATGCATCACGCTCTCGGTGTT AGATAGTCCCCAATTCAGTATCCTGGGCGGACAAGGCATCGGTTATTTTG TCATTCTGCGGTCGCAAGAACCCCAACACTGTCTGCACCGCATAATTTTC TCCAGGTTGCCTGTTGACCGCCCCCGTTATTCCGTTTTTTTCGTGCCAGG TGTTGCGTCCCAATGAAGGTTGTCACAGCAGGAATTGGCCTACGGGCAGG GCACGTCCTGGCGATCATGAAAGAGACAATGCCGGAGGTAGAGTTCGTGG GCTACCACGACCCGCAGCCGACATTCCTGGCCAAGATTGGCGAAGACGTT CCCGCTTTCGAGGGCGTGGTCGAGATGATCGAAAAGACGAAGCCGGATCT CTTGTTCGTCGGGTCGCCTAACAACTTCCATTTGGATCACATCAAGGCCG GCCTTGCAGCCGGTGTTCGTGTCTTCACGGAAAAGCCGGTCGTCATCTCC GAGGAAGAGACCCTGGAGCTAGCGGCGCTACTGAAGCAGCACGGCGTGGA TCGCCTGATGGTGGGGCTGGTGCTGCGGTACTCGCAGCATATGGTCGACC TGCGAGCGGTCTTGAAGATGCTGGGACCCATCGTGAGCCTGGAAGCGAAC GAGCACATCGCCCCTTACCACGGTGCCTTTTTCATGCGCGACTGGCGGAG GCTTTCGAAGTTGTCTGGCGGTTTCATGCTCGAGAAGTGCTGCCACGACC TCGACCTCTACAACATGGTGAGAGTATTGATTGAAATCTTGACGGCTCTT GCACACATCATACAACCACCACAGCAAACATAGTTCGGAGAATTTTGGGC CGCGGAGTTGCAATTGTTTCAGCCTTCTTAGTCGGCAGTGTTTGACATCA TTTCTGGAGTCCTGTCGTGCGAGCAGGCGGTCCGACACTCGACATGACCG TCGACCTCGAAGTCAAACGAATGATGCGAAGCTACATGGACTTTCGGGCG GCCAACTTGCGTTGGACACTCTGTACAAAGCTTTTAAAGACTGGTCCGCA CGCGTACAGTCGTATGTGTTTATGCCGCTCTCTCTCTTTTTGGCTGTGGG TATTCGTCTTGGATCCGTAGGTGACCGGCTCGCGGCCTATCAAGGTGGCG AGCTTTGGCGGGAAGCGGTCGTACGTGCCTGAATTCGCCCCGGCGGCAGA AACGGTGGAGGACGGCATCATGCGCAGCAAGGAAAGCGTCTGGAACAGCG TTGACGACGCCTTCAACAACGACTGCGACATCATCGACCACCAGACGGCG ATCTTGAAGTACGAAACGGGCGCTTCGCTGGCGTTTCACACGAACCTCAA CGTGCCCGACGAGCACCGCCGTTTCTGCGTCATGGGCACGCTCGGCATGG TCGAGGGCGACTTTGTCAGGGGCTACCTTAAGGCCACTGCCCGCGACGGC ACGGTCATTGCCGACCATGACTACACCAAGATCGACCCGACCAAGATGTC GGCGCACTACGGGGCCGACCATCTGATGATTGCGGACGTGGCGGCATTTT TGAGGGGCGAAGCGGTCGATTTGCCCGTTGGCATTGTCGACGCTCTCGAG GCGGGGCTGGTCGCGATAGCTCTGGACAAGGCCCGGGTTTCCGGGGAGAT GGTCGACATGTCTGAAACCTGGGCAGCGCTCGATGCGTTCGGGTTGCGGA GATGAGATGGGAGTTGAGACGAGCGCAGGGCTTGCCGGAGCGAGAGGAAG GATGTTCGTTCCTTCTCCTTTGGCCTGCTCTTCTCTGTGTGTGTGTGTGT GTGTGTGTGTTTTTTTCTTGCCGTGCCCTCGGCTTTGGCAGTTGATGTGT TTTTGTTGCGTAGCTGATCGGCGTGTCCCTGCCGGATGGAGAAGCTTCAT TTAATTTGCAAATCTGTTCGCTATTCACAGTAGTACCCGACACGCAAGTA CACCAGTGGCTTTTAGGAGAGATAGGCCCGGCCGTCGTAAACCCGACAGC AGTGACGCACTTTATCTCGGAAAAGAGGTGTGTGGGGTACTAAGATAGCT CCTGAAGATGACAAGGCTTCGAACTAAGGATATACAAACGGGACTTTTGT ATTAATTTCGTTTCGATGCGTTTTCGTTACTTGATTTCGTTTGCTCTCCC AATTTGTAGAGATAAATGGCTCCACATTCATCTACGATGTTGCTGGCTGT TACTCTATCTCAGGCCTTGGGACCGGGTCGAATATTATTTTGTTGTGTTC TTCACTCGAGCGTTATTATGAGAAGTCTGCTGTATGTGTACCTTCGACGT AGCTTTCAGAGTTGGCCGGTGTGCACAGAGACAAGAACAACAGCGGCAAC ATACAACATGCACATACGTAACCACGGTTTCGGGTACGGCTGCAACGTCT CGTAGATGGTGAAGCTATATGGTTCTCCTGCTGTGAGTCCACACACACTT GTGACTTGGAATGCTGTTGCCGAGTTCGGCGTGTCTACTATTTGATTAAC GGAACATCATGAAGGAATGAAACAGCAGTGAGAGTCTGTTTTGCACGTTA GGGGATTCTTTTTTGGTACGGCTATTTCTTACGGTCAACGTTCTTTTGGC CTGGCGTTTTAACCCCCCTACAAGAATCCAACTAGAGAACACCCTTACCC CCCCCACCCGCAAACAGCCCTGTCGCACACATCATGCGACAGCACTAACC AGAACTCGACCCCTAGGACACAGATGCCTGATGGAGCGTGTGCTCCTATG TACTCAAGTTGGCCACAGGAAGTTTGGTGGCAGTGAGTTCGGGCTGTGGT GAGATTTTTGCGGCGGTGTGTGTTGTGTGTGTGTGTGTGTGTTGTCATCC CTTCAATTGGACGCCACTCTACACCATTCGCGTAGGTAGACGCTCCAACC GGGGTCACA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig148:259759..267167-

>mRNA_P-littoralis_Contig148.59.2 ID=mRNA_P-littoralis_Contig148.59.2|Name=mRNA_P-littoralis_Contig148.59.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1212bp|location=Sequence derived from alignment at P-littoralis_Contig148:259759..267167- (Pylaiella littoralis U1_48)
ATGCGTGTGTACTCCCCGCCGATGGGGCGTGTGTACGATGTACGCCGCAG
GACAAGAAGGTGTTGCGTCCCAATGAAGGTTGTCACAGCAGGAATTGGCC
TACGGGCAGGGCACGTCCTGGCGATCATGAAAGAGACAATGCCGGAGGTA
GAGTTCGTGGGCTACCACGACCCGCAGCCGACATTCCTGGCCAAGATTGG
CGAAGACGTTCCCGCTTTCGAGGGCGTGGTCGAGATGATCGAAAAGACGA
AGCCGGATCTCTTGTTCGTCGGGTCGCCTAACAACTTCCATTTGGATCAC
ATCAAGGCCGGCCTTGCAGCCGGTGTTCGTGTCTTCACGGAAAAGCCGGT
CGTCATCTCCGAGGAAGAGACCCTGGAGCTAGCGGCGCTACTGAAGCAGC
ACGGCGTGGATCGCCTGATGGTGGGGCTGGTGCTGCGGTACTCGCAGCAT
ATGGTCGACCTGCGAGCGGTCTTGAAGATGCTGGGACCCATCGTGAGCCT
GGAAGCGAACGAGCACATCGCCCCTTACCACGGTGCCTTTTTCATGCGCG
ACTGGCGGAGGCTTTCGAAGTTGTCTGGCGGTTTCATGCTCGAGAAGTGC
TGCCACGACCTCGACCTCTACAACATGGTGACCGGCTCGCGGCCTATCAA
GGTGGCGAGCTTTGGCGGGAAGCGGTCGTACGTGCCTGAATTCGCCCCGG
CGGCAGAAACGGTGGAGGACGGCATCATGCGCAGCAAGGAAAGCGTCTGG
AACAGCGTTGACGACGCCTTCAACAACGACTGCGACATCATCGACCACCA
GACGGCGATCTTGAAGTACGAAACGGGCGCTTCGCTGGCGTTTCACACGA
ACCTCAACGTGCCCGACGAGCACCGCCGTTTCTGCGTCATGGGCACGCTC
GGCATGGTCGAGGGCGACTTTGTCAGGGGCTACCTTAAGGCCACTGCCCG
CGACGGCACGGTCATTGCCGACCATGACTACACCAAGATCGACCCGACCA
AGATGTCGGCGCACTACGGGGCCGACCATCTGATGATTGCGGACGTGGCG
GCATTTTTGAGGGGCGAAGCGGTCGATTTGCCCGTTGGCATTGTCGACGC
TCTCGAGGCGGGGCTGGTCGCGATAGCTCTGGACAAGGCCCGGGTTTCCG
GGGAGATGGTCGACATGTCTGAAACCTGGGCAGCGCTCGATGCGTTCGGG
TTGCGGAGATGA
back to top