prot_P-littoralis_Contig148.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.56.1
Unique Nameprot_P-littoralis_Contig148.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 2.280e-133
Identity = 193/217 (88.94%), Postives = 205/217 (94.47%), Query Frame = 0
Query:    6 TQMFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            TQ+FLG+AATLIASSTAFVAPMAVRSA P +SSS+LKMS GSDYVATLPGAPFGDGKIFDPL LSDGA P +IKKWREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFW FSLLGMAFIEYNTI TAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP+DE AL+VM+TKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 2.930e-127
Identity = 185/215 (86.05%), Postives = 200/215 (93.02%), Query Frame = 0
Query:    8 MFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            MFLGTAATLIASSTAFVAPMAVRSA P +S+S+LKMS GSDYVATLPGAPFGDGKIFDPL LSDGA PGEIK WREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTIT A+  PS VTGEGGL+++YSPGDLGFDPL +KP+D+  LE MQTKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:    7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 4.430e-125
Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 0
Query:    7 QMFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            QMFLGTAA LIASSTAFVAP+AVRSA P +++S+LKMS GSDYVATLPGAPF DGKIFDPL LSDGAAPG+IKKWREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFWAFSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP  E AL+VM+TKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 5.230e-111
Identity = 167/215 (77.67%), Postives = 189/215 (87.91%), Query Frame = 0
Query:    8 MFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            MFLGTAATLIASS AFV PMAVRSA P +S+S+LKMS G+DY+ATLPGA   +GKIFD L L+DGA PGEIK WREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FWA+SLLGMAFIEYNTI  A+  PS VTGEGGL+++YSPGDLGFDP  IKP+D+  LE MQ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:    7 MFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 5.250e-105
Identity = 168/216 (77.78%), Postives = 174/216 (80.56%), Query Frame = 0
Query:    7 QMFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            QMF+GTAATLIASSTAFVAPMAVRS   T SS  LKMS GSDYVATLPGAPF DGKIFDPLGLSDGAAPG+IKKWREAEIKHGRVAMLASLGV+VAE                            FWAFSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.750e-103
Identity = 146/161 (90.68%), Postives = 155/161 (96.27%), Query Frame = 0
Query:   62 KIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            +IFDPLGLSDGAAPG+IKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAF+EYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 1.460e-102
Identity = 195/388 (50.26%), Postives = 205/388 (52.84%), Query Frame = 0
Query:    7 QMFLGTAATLIASSTAFVAPMAVRS-AVPTASSSSLKMSDGSDYVATLPGAPFGDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            QMF+GTAATLIASSTAFVAP+AVRS A+ T SSSSL MS GSDYVATLPGAPF DGK                                                                                                                                                                           IFDPLGLSDGAAPG+IKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.310e-91
Identity = 133/160 (83.12%), Postives = 145/160 (90.62%), Query Frame = 0
Query:   62 KIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            KIFDPLGL+DGA  G+IK WREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFWAFSLL +A IEYNTIT A+  PS VTGEGGL+++YSPGDLGFDPL +KP D+ ALE MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 5.750e-87
Identity = 137/220 (62.27%), Postives = 169/220 (76.82%), Query Frame = 0
Query:    4 TTTQMFLGTAATLIASSTAFVAPMAVR-SAVPTASSSSLKMSDGSDYVATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 222
            T+T   +G A+   AS  AF+ P     SA PT  S++ +MS GSDYV+TLPGAPF DGK++DP+GLS  A P +IKKWREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+A++P+FWA +LL +A++EY  I   F     VTGEGG++ DY PGDLGFDPLG+ P+DE  L VM+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   54 TSTGALVGMASWCFASCEAFIVPTPTTLSARPT--STAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 6.930e-79
Identity = 134/222 (60.36%), Postives = 169/222 (76.13%), Query Frame = 0
Query:    5 TTQMFLGTAATLIASSTAFVAPMAV-RSAVP-TASSSSLKMSDGSDYVATLPGAPFG---DGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 221
            T+Q+FLGTAATLIASS AFVAP+A  RS++   A+SS+ KM+ GSDY A+LPGAPFG   +GK FDP GL+    P  IKKWREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FW  SL  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPLG+ P+D E   ++Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    3 TSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI2.280e-13388.94Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI2.930e-12786.05Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI4.430e-12585.58Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI5.230e-11177.67Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE5.250e-10577.78LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI5.750e-10390.68Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE1.460e-10250.26LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI2.310e-9183.13Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI5.750e-8762.27Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI6.930e-7960.36Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 39..222
e-value: 2.9E-42
score: 146.8
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 5..218
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 61..221
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 52..213
e-value: 2.5E-38
score: 132.1
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 5..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:253386..257112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.56.1mRNA_P-littoralis_Contig148.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 253224..257724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.56.1 ID=prot_P-littoralis_Contig148.56.1|Name=mRNA_P-littoralis_Contig148.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MKSTTTQMFLGTAATLIASSTAFVAPMAVRSAVPTASSSSLKMSDGSDYV
ATLPGAPFGDGKIFDPLGLSDGAAPGEIKKWREAEIKHGRVAMLASLGVL
VAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITT
AFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGR
LAMIGIAGMLVQELVNPADILG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln