prot_P-littoralis_Contig148.52.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.52.2
Unique Nameprot_P-littoralis_Contig148.52.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length297
Homology
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 4.120e-118
Identity = 168/185 (90.81%), Postives = 178/185 (96.22%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            S++L+MSAGSDYVATLPGAPF DGKIFDPL LSDGA P+DIKKWREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDY PGDLGFDPL +KP+DE AL+VM+TKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:   36 SSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 2.200e-109
Identity = 158/184 (85.87%), Postives = 170/184 (92.39%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 295
            +++L+MSAGSDYVATLPGAPFSDGKIFDPL LSDGAAP DIKKWREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP  E AL+VM+TKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:   36 ASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 7.590e-107
Identity = 152/185 (82.16%), Postives = 169/185 (91.35%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            +++L+MSAGSDYVATLPGAPF DGKIFDPL LSDGA P +IK WREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGL+++YSPGDLGFDPL +KP+D+  LE MQTKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:   37 ASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 9.420e-102
Identity = 145/161 (90.06%), Postives = 154/161 (95.65%), Query Frame = 0
Query:  136 KIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            +IFDPLGLSDGAAP DIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTIMTAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 3.170e-99
Identity = 146/161 (90.68%), Postives = 154/161 (95.65%), Query Frame = 0
Query:  136 KIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            +IFDPLGLSDGAAP DIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.120e-93
Identity = 138/185 (74.59%), Postives = 162/185 (87.57%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            +++L+MSAG+DY+ATLPGA   +GKIFD L L+DGA P +IK WREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI  A+  PS VTGEGGL+++YSPGDLGFDP  IKP+D+  LE MQ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:   37 ASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 8.180e-90
Identity = 142/185 (76.76%), Postives = 148/185 (80.00%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            S  L+MSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAP DIKKWREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 SPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 4.130e-89
Identity = 131/160 (81.88%), Postives = 142/160 (88.75%), Query Frame = 0
Query:  136 KIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 295
            KIFDPLGL+DGA   DIK WREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTI  A+  PS VTGEGGL+++YSPGDLGFDPL +KP D+ ALE MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 1.530e-86
Identity = 126/185 (68.11%), Postives = 152/185 (82.16%), Query Frame = 0
Query:  112 SASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            S + RMSAGSDYV+TLPGAPF+DGK++DP+GLS  A P DIKKWREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   F     VTGEGG++ DY PGDLGFDPLG+ P+DE  L VM+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   87 STAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Match: A0A6H5JAU1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU1_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 4.250e-71
Identity = 116/161 (72.05%), Postives = 124/161 (77.02%), Query Frame = 0
Query:  136 KIFDPLGLSDGAAPSDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 296
            KI DPLGLSDGAAP DIKKWRE EIKHGRVAMLASLGV+VAE                            FWVFSLLGMAFIEYNTI+TAF+TPSA+TGEGGLKEDY PGDLGFDPL +KP D  AL+VM+TKELNNGRLAMIGIAGM+ QELVNPADILG
Sbjct:   23 KILDPLGLSDGAAPGDIKKWRETEIKHGRVAMLASLGVIVAE----------------------------FWVFSLLGMAFIEYNTIITAFDTPSALTGEGGLKEDYMPGDLGFDPLNLKPDDVAALDVMKTKELNNGRLAMIGIAGMMAQELVNPADILG 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.52.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI4.120e-11890.81Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI2.200e-10985.87Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI7.590e-10782.16Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI9.420e-10290.06Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE3.170e-9990.68LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7S0_ECTSI1.120e-9374.59Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE8.180e-9076.76LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7Q7_ECTSI4.130e-8981.88Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI1.530e-8668.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JAU1_9PHAE4.250e-7172.05LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 127..287
e-value: 2.3E-37
score: 129.0
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 114..296
e-value: 2.4E-41
score: 143.8
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 75..292
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 132..295
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 75..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:240405..244228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.52.2mRNA_P-littoralis_Contig148.52.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 240404..245274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.52.2 ID=prot_P-littoralis_Contig148.52.2|Name=mRNA_P-littoralis_Contig148.52.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MNDVSKHSRKAYVLHAGTPWKIIHAGSTLWSLQKPVSLSLPQRGDFACHL
RLPYHNILHPSSPHIPYPPKPHKMMSTSTQMFLGTAATLVASSAAFVAPM
AVRSVAPAASASASLRMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPS
DIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEIS
AQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYSPGDLGFD
PLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln