prot_P-littoralis_Contig148.47.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig148.47.1
Unique Name	prot_P-littoralis_Contig148.47.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	232

Homology

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A6H5L1Z1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 4.040e-112
Identity = 181/241 (75.10%), Postives = 195/241 (80.91%), Query Frame = 0

Query:    1 MTAPSVSSASRAARGFGVKKRRVASRRLHAGMRMRGRALVCCFLTMTVQSRAFLIAPPARGA---PRAA-GAPTSSS---LMAYDVKYSPNVWRDEDEIKPGFGGIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGK--VKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGG-VEWGGVFLDED 231
            MT P+ S   RA  G   K RR  +     GMR R  ALV  +L M VQSRAFL+AP   G    PRAA GA  +S+   LMAYDVKYSPN W DED+I PGFGGIWPGDPDAETHHVTYVNKAGEEVAS DVPVDRY++FATEDAGVDVPI+NKKRMCRNGCCTTCAVKVLEGK  VKQEGALGLLK+L+++GYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGG VEWGG FLDED
Sbjct:    1 MTPPATS---RAGGGRSTKPRRPVATG-SGGMRARAGALV--WLLMAVQSRAFLVAPAVGGGVCRPRAAAGAARTSAASPLMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETHHVTYVNKAGEEVASADVPVDRYIFFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A835Z8Q8_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.540e-70
Identity = 106/171 (61.99%), Postives = 130/171 (76.02%), Query Frame = 0

Query:   69 PTSSSLMAYDVKYSPNVWRDEDEIKPGFGGIWPGDPDAETH-------HVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE-GGVEWGGVFLDED 231
            P  +  MAYDV+YSPN W ++  ++PG GGIWPGDP+A+TH        VT  NKAGE VA +DVP DRY+YFA ED G D+P+ N +RMCRNGCCTTCA+ V EGKVK EG LGLLKDL+RDG+ LTCCSY  +D+ +QLQ+ED+VY+KQ+G  FE GGVEWGG   +ED
Sbjct:   46 PRHTCRMAYDVRYSPNSWPNQ-PLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A7S2V5A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.710e-62
Identity = 99/158 (62.66%), Postives = 123/158 (77.85%), Query Frame = 0

Query:   76 AYDVKYSPNVWRDEDEIKPGFGGIWPGDPDAETHHVTYVN-KAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE-GGVEWGGVFLDED 231
            AYD + SPN W     I+PGFGG WPGDP+A T +V   N   GEEV  +DVP DRY+YFA EDAG+++P++NK+R CRNGCCTTCAVK  EGK+K +  LGLLK++K+ GY L CCSYP+SDLVV++Q+ED+VY KQ+G+ FE GGVEWGG FL ED
Sbjct:  100 AYDWRTSPNKWGRGIPIEPGFGGPWPGDPNAPTFNVKVRNVDTGEEV-EMDVPADRYIYFAFEDAGIELPLINKERACRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGG-FLPED 255

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.170e-61
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 0

Query:   69 PTSSSLMAYDVKYSPNVW-RDEDEIKPGFGGIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE-GGVEWGGVFLDED 231
            P     +   ++ SPN W R+   ++PG GGIWPG PDA+ + VT V+   +   ++DVP DRY++FA ED+GVD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGLL+D+K  GYAL+CCS P+SD+V +LQ+ED+VY++Q+G  FE GGVEWGG FL ED
Sbjct:   53 PPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGG-FLPED 216

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A7S3YL42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK)

HSP 1 Score: 182 bits (463), Expect = 2.310e-54
Identity = 96/195 (49.23%), Postives = 133/195 (68.21%), Query Frame = 0

Query:   44 LTMTVQSRAFLIA-PPARGAPRAAGAPTSSSLMAYDVKYSPNVWRDEDE-IKPGFGGIWPGDPDAETHHVTYVN-KAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKR---MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE-GGVEWGGVFLDED 231
            LT   +  +FL++      +PR+  + +      YD + SPN W   D+  +PGFGG WPGDP+A    VT  N   G EV  + VP+DRY++F  E+  + VPI++ +R   MCRNGCCTTCAVKV+EGKVKQ+  +GL+K+L+++GYAL CC+YP+SDLV+++  ED+ Y+KQ+G  FE GGVEWGG FL ED
Sbjct:   27 LTFIQEVESFLLSGSKVPNSPRSRDSDSGPLFAKYDWRRSPNKWTVTDKPAEPGFGGPWPGDPNAPKFKVTVKNVDEGTEVTHM-VPIDRYIFFQFEEDDIPVPIISGQRGERMCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGG-FLPED 219

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A482T133_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH)

HSP 1 Score: 179 bits (453), Expect = 4.170e-53
Identity = 85/149 (57.05%), Postives = 106/149 (71.14%), Query Frame = 0

Query:   85 VWRDEDEIKPGFGGIWPGDPDAETHHVTYVNK-AGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGG-VEWGGVFLDED 231
             W      KPG GGIWPGDP A+ + VT  +K  GEE   + VP DRY+YF  E+ GV++PI NK RMCR GCCT C VKV EGKVK +  LGLLK+ + DGYAL+CC+YPKSD+V +LQ+ED++Y+KQ+   FEGG V WGGV  + D
Sbjct:   54 AWAKRRGFKPGVGGIWPGDPSAKKYQVTVKSKKTGEEFVQM-VPEDRYIYFYFEEQGVELPIHNKARMCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: W7TUL4_9STRA (Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUL4_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.820e-52
Identity = 81/142 (57.04%), Postives = 107/142 (75.35%), Query Frame = 0

Query:   69 PTSSSLMAYDVKYSPNVW-RDEDEIKPGFGGIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVY 209
            P     +   ++ SPN W R+   ++PG GGIWPG PDA+ + VT V+   +   ++DVP DRY++FA ED+GVD+P+VN KRMCRNGCCTTCAVK+ EGKVK E ALGLL+D+K  GYAL+CCS P+SD+V +LQ+ED+VY
Sbjct:   53 PPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVY 194

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A0G4ELQ0_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELQ0_VITBC)

HSP 1 Score: 162 bits (409), Expect = 1.930e-45
Identity = 74/141 (52.48%), Postives = 103/141 (73.05%), Query Frame = 0

Query:   78 DVKYSPNVWRDEDEIKPGFGGIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE 218
            D   +P  W   D IKP  GG WPGDP+A+T+ VT ++    E  + DVP DRY++F+ E++    PI N K+MCRNGCCTTCAV+V EG+VK +  +GL ++++R GYALTC SYP+SD+V++LQ+ED+VY KQFG+ F+
Sbjct:  129 DADDTPMKWEMGDRIKPYKGGPWPGDPNAKTYKVTIIDPVSGERHTQDVPEDRYIFFSFEESRNLPPIKNIKKMCRNGCCTTCAVRVREGEVKMDPQIGLTREMERAGYALTCVSYPRSDVVLELQDEDEVYKKQFGDTFD 269

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A7S1ER34_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 1.430e-43
Identity = 76/135 (56.30%), Postives = 96/135 (71.11%), Query Frame = 0

Query:   98 GIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFE-GGVEWGGVFLDED 231
            G  PGD +A+ + VT  + A     SV+VPVDRY++ + E+ G D+P       CR+GCCTTCAV++ +G V QE ALGL+K L+  GYAL C SYP+SDLV  LQ+ D+VY+KQFGN FE GG EWGGVFLDED
Sbjct:   40 GNLPGDVNAKKYKVTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPA-----SCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169

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BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Match: A0A0G4HZN2_9ALVE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZN2_9ALVE)

HSP 1 Score: 153 bits (386), Expect = 2.190e-42
Identity = 69/155 (44.52%), Postives = 109/155 (70.32%), Query Frame = 0

Query:   77 YDVKYSPNVWRDEDEIKPGFGGIWPGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKRMCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGVEWGGVFLDED 231
            +D+  SP  W+ +  + P  GG +PGDPDA+ ++VT ++    E  S+DV  DRY++FA E+AG+ +PI N K+MCRNGCCTTC V++ EG V+ +  +GL+K++ ++GY L+C S P+SD+V + Q+ED+VY+KQ+   FE G    G+ +++D
Sbjct:   98 FDLNKSPMRWQGQTLVPPK-GGAFPGDPDAKKYNVTLIDSKTGESYSLDVAEDRYIFFAFEEAGIKLPIRNIKKMCRNGCCTTCTVRMREGDVEMDPQIGLVKEMTKNGYRLSCVSMPRSDVVAEFQDEDEVYVKQWAESFEKGKVDFGIPIEDD 251

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig148.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L1Z1_9PHAE	4.040e-112	75.10	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A835Z8Q8_9STRA	2.540e-70	61.99	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A7S2V5A4_9STRA	1.710e-62	62.66	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A4D9CSH6_9STRA	1.170e-61	58.18	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S3YL42_HETAK	2.310e-54	49.23	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A482T133_9ARCH	4.170e-53	57.05	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
W7TUL4_9STRA	2.820e-52	57.04	Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gadita...	[more]
A0A0G4ELQ0_VITBC	1.930e-45	52.48	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S1ER34_9RHOD	1.430e-43	56.30	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]
A0A0G4HZN2_9ALVE	2.190e-42	44.52	2Fe-2S ferredoxin-type domain-containing protein n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 133..195 e-value: 4.2E-9 score: 36.2
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 109..206 score: 9.698944
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 113..201 e-value: 3.96011E-16 score: 68.9608
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 106..217 e-value: 3.8E-22 score: 79.8
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 104..215
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 104..215
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 100..210

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig148	contig	P-littoralis_Contig148:223827..228497 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig148.47.1	mRNA_P-littoralis_Contig148.47.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig148 223788..228502 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig148.47.1 ID=prot_P-littoralis_Contig148.47.1|Name=mRNA_P-littoralis_Contig148.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=232bp
MTAPSVSSASRAARGFGVKKRRVASRRLHAGMRMRGRALVCCFLTMTVQS
RAFLIAPPARGAPRAAGAPTSSSLMAYDVKYSPNVWRDEDEIKPGFGGIW
PGDPDAETHHVTYVNKAGEEVASVDVPVDRYVYFATEDAGVDVPIVNKKR
MCRNGCCTTCAVKVLEGKVKQEGALGLLKDLKRDGYALTCCSYPKSDLVV
QLQEEDDVYMKQFGNDFEGGVEWGGVFLDED*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf