prot_P-littoralis_Contig148.44.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.44.2
Unique Nameprot_P-littoralis_Contig148.44.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length791
Homology
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A6H5L180_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L180_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 2.510e-169
Identity = 448/776 (57.73%), Postives = 512/776 (65.98%), Query Frame = 0
Query:    9 HLTRYFSPSSCLVRRSTRRVTST---FNPGSRGVYRRHGLVAMLLVADRSRVVDAFGGVAVGVASTFRIGSTGIGSATPPAEGTSTSRAVEELRRGGRGEGRSRRMMVRPRSTTLAPATSAGEEQALSGEPKGPNGSAAGEDA--ASKTATLDRDQKDAETG-RGTVEAPQRGKPKRLGAVIHRAGRDKRRNEGRTIRKSQSSTSVVGFEELNSFRVDPSLVRPSIVRYLANAEQLSSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMKQKRVKRDQYSFAGGLWASVQLRDHELAMDLLEEMVDMGMPANVEGYATAIRTCARCSKGDEAVYVYADQLRMAVVPTKATYKALIEAFAHCKDAERAVWVLDEMREMQVPIEHWHLMDVMYACTDESHIALEVLRVNEELDLKTAAKMYATALEVCIAAGDFEAAMTAMEMMYHMDLEPEPEQEKRMLQSCADPLWVAKEERARGREEXXXXXXXXXXXGGVDGSDFWREKD 778
            HLT+YFSP+ CLVRR  +  T T    NPG RGV RRHGLVAMLLVADRSRVVDAFGGVAVGVAS  R GS       PP    + S                RRMMVRPR  TLAP T AGE +ALSG           ED   +SKTAT+DR +  A  G RG  EA Q G  KRLG VI RAG + RR + RT+R  + ST V  F ELNS +VDPSLV+ S++ YL+N E+L+ MQF NLGMASSRHCDIHLT+EVCE+AR +G+  +V FMT LV+AA++SRRWV A+QLLQLMRS G  PN VTYT +L+ MSKAKQHH+AAE ++TEGLQ SLFAYNALISGC S RGY+RA+GYF+DM K GV P++ TF+S+IAT RDGS  SPER +  +QMM++AGL+P T C+NS+MAVNVQARQ        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                DA RA WVLDEMREM VPIEH HLMDV+YACTD+  +ALEVLR+NEEL L    KMYA ALEVCIAAGD EA+ TA++ M     +P P+QEKRML+SCADP W++K   +   +       XXXXXGG   +DFW+ +D
Sbjct:    9 HLTKYFSPTQCLVRRRAKHATPTPPIVNPG-RGVCRRHGLVAMLLVADRSRVVDAFGGVAVGVASALRAGS-------PPGSECTAS---------------GRRMMVRPRPATLAPTTDAGEGRALSGIKSNSPSEGTSEDGGTSSKTATVDRVEAQAAAGGRGKDEARQNGNRKRLG-VIGRAGSEDRRFQRRTLRTPRPSTRVASFRELNSRKVDPSLVKQSVLHYLSNPEELTVMQFTNLGMASSRHCDIHLTVEVCEQARLVGITPDVRFMTNLVNAASQSRRWVMALQLLQLMRSNGTPPNEVTYTSVLSNMSKAKQHHIAAETMRTEGLQKSLFAYNALISGCASGRGYERALGYFDDMRKAGVGPNEMTFASIIATIRDGSAGSPERAIEAVQMMKEAGLRPDTYCMNSVMAVNVQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARRAAWVLDEMREMLVPIEHVHLMDVLYACTDQCDVALEVLRLNEELGLDAVPKMYAMALEVCIAAGDNEASTTALDKMTAAGFQPRPDQEKRMLRSCADPQWISKRHSSGESQRVEEGEGXXXXXGGDVRTDFWQARD 760          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: D7G7R2_ECTSI (Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R2_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 1.520e-100
Identity = 352/678 (51.92%), Postives = 403/678 (59.44%), Query Frame = 0
Query:  111 MMVRPRSTTLAPATSAGEEQALSGEPKGPNGSAAGED--AASKTATLDRDQKDAET---GRG-TVEAPQRGKPKRLGAVIHRAGRDKRRNEGRTIRKSQSSTSVVGFEELNSFRVDPSLVRPSIVRYLANAEQLSSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLMKQKRVKRDQYSFAGGLWASVQLRDHELAMDLLEEMVDMGMPANVEGYATAIRTCARCSKGDEAVYVYADQLRMAVVPTKATYKALIEAFAHCKDAERAVWVLDEMREMQVPIEHWHLMDVMYACTDESHIALEVLRVNEELDLKTAAKMYATALEVCIAAGDFEAAMTAMEMMYHMDLEPEPEQEKRMLQSCADPLWVAKE----ERARGREEXXXXXXXXXXXGGVDGSDFWREKD 778
            MMVRPR TTLAP T AGE++ALS      +  + GED  A+S TATLDR +  A     GRG   EA Q G  KRLG VI RAG + RR + RT+R  + ST V  F ELNS +VD SLV+ S++ YL++ E+L+ MQF NLGMASSRHCDIHLT+EV E                                                            QHH+AAE ++TEGLQ SLFAYNALISGC S RGY+RA+GYF+DM K GV+PD+ TF+S+IAT RDGSE SPER +  +QMM++AGL+P T C+NS+MAVNVQARQP       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                               KDA RA WVLDEMREM VPIEH HLMDV+YACTD+  IALEVLR+NEEL L    KMYA ALEVCI AGD+EA+  A++ M     EP P+QEKRML+SCADP W++K     E  R  EE                +DFW+++D
Sbjct:    1 MMVRPRPTTLAPTTDAGEDRALS------SSESTGEDGGASSNTATLDRVEAQAAAAGGGRGGRDEARQNGNRKRLG-VIGRAGSEDRRFQRRTLRTPRPSTRVASFRELNSRKVDRSLVKQSVLHYLSDPEELTVMQFTNLGMASSRHCDIHLTVEVIE------------------------------------------------------------QHHIAAETMRTEGLQKSLFAYNALISGCASGRGYERALGYFDDMRKAGVEPDEMTFASIIATIRDGSEGSPERAIEAVQMMKEAGLRPDTYCMNSVMAVNVQARQPNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDARRAAWVLDEMREMLVPIEHVHLMDVLYACTDQCDIALEVLRLNEELGLDAVPKMYAMALEVCITAGDYEASTIALDKMTAAGFEPRPDQEKRMLRSCADPQWISKRHSPGELQRVEEEGEGEGRDVP-------TDFWQDRD 604          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A314Z9J6_PRUYE (Pentatricopeptide repeat-containing protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314Z9J6_PRUYE)

HSP 1 Score: 59.7 bits (143), Expect = 1.680e-5
Identity = 51/199 (25.63%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  239 SSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIF 437
            +S  F   G+  S +CD      V  +  + G + + Y    ++   +       A Q+   +   G+  N    T ++   SK +     A+++  E ++  LF + A ISGC  +   ++A+  FN M +QGVKP++ TFSS ++     S    E G  +  +   +GL   T    +L+A+  Q R    A +IF
Sbjct:  156 ASWNFLLCGIYDSENCDHG--PNVFREMLAQGFKPDTYTYISILRCCSSLLTVCFAKQVHTHIIKSGLNANRFVATVLIGMYSKGRSLD-DADVILNELIERDLFTWTAHISGCAQTNQGEKAVKSFNQMQRQGVKPNNFTFSSCLSAC--SSSAILESGQQLHSLALKSGLSNDTYVSCALVAMYAQCRCIEDAEKIF 349          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A8H7QYU9_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QYU9_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.770e-5
Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:  337 GLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLI-ATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALE 435
            GLQ+ +  +N LI  C      + A  +F+ M K+G++P++ TF+ ++ A  +  S Q+ +   A  + + D  LKPSTI +N+LM V V A QP  A+E
Sbjct:  111 GLQSPI-VWNQLIGYCAKHGRANYAEQFFSQMRKRGLEPNERTFTHMLTAFGKSNSPQAVKNAEAWFKRINDFDLKPSTIHMNNLMRVYVNAEQPEKAIE 209          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: UPI0011DF3C04 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011DF3C04)

HSP 1 Score: 58.5 bits (140), Expect = 2.920e-5
Identity = 59/245 (24.08%), Postives = 100/245 (40.82%), Query Frame = 0
Query:  198 TIRKSQSSTSVVGFEEL-NSFRVDPSLVRPSIVRYLANAEQLSSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQ-LMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMV---QTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIF 437
            TIR+   S      E L  S + DP + +   +  L  +       +   GM           M+  E+   +G   +V     L+ A   S+ +    +L   L + YGVLP+ V+Y  ++    +A     A E+V   +   L+ +   Y  ++         D A   +N M + G + D T ++  I  +  G    PE   A+++ MR+AGLKP  I  N LM    ++     A ++F
Sbjct:   63 TIRRLAKSRRFTDIEALIESHKKDPKIKQEPYLSTLIRS-------YGRAGMFEQ-------AMKTFEQMDELGTPRSVISFNSLLTACNHSKLFEKVPELFNDLPKKYGVLPDKVSYGILVRSYCEAGTPEKALEIVADMEKNDLEVTAVTYTTIMDALYKKGQADEADKLWNTMLENGCEVDVTAYNVRIMHSHGGE---PETVKAMIEEMRNAGLKPDAISYNYLMTSYCKSGMLDEAKKVF 290          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: M5WFX0_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5WFX0_PRUPE)

HSP 1 Score: 58.9 bits (141), Expect = 3.740e-5
Identity = 50/199 (25.13%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  239 SSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIF 437
            +S  F   G+  S +CD      V ++  + G + + Y    ++   +       A Q+   +   G+  N    T ++   SK +     A+++  E ++  LF +  LISGC  +   ++A+  FN M +QGVKP++ TFSS ++     S    E G  +  +   +G    T    +L+A+  Q R    A +IF
Sbjct:  442 ASWNFLLCGIYDSENCDHG--PNVFKEMLAQGFKPDTYTYISILRCCSSLLTVFFAKQVHTHIIKSGLNANRFVATVLIGMYSKGRSLD-DADVILNELMERDLFTWTVLISGCAQTNQGEKAVKSFNQMQRQGVKPNNFTFSSCLSAC--SSSAILESGQQLHSLALKSGQSNDTYVSCALVAMYAQCRCIEDAEKIF 635          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A251NES6_PRUPE (Uncharacterized protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251NES6_PRUPE)

HSP 1 Score: 58.9 bits (141), Expect = 3.770e-5
Identity = 50/199 (25.13%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  239 SSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIF 437
            +S  F   G+  S +CD      V ++  + G + + Y    ++   +       A Q+   +   G+  N    T ++   SK +     A+++  E ++  LF +  LISGC  +   ++A+  FN M +QGVKP++ TFSS ++     S    E G  +  +   +G    T    +L+A+  Q R    A +IF
Sbjct:  450 ASWNFLLCGIYDSENCDHG--PNVFKEMLAQGFKPDTYTYISILRCCSSLLTVFFAKQVHTHIIKSGLNANRFVATVLIGMYSKGRSLD-DADVILNELMERDLFTWTVLISGCAQTNQGEKAVKSFNQMQRQGVKPNNFTFSSCLSAC--SSSAILESGQQLHSLALKSGQSNDTYVSCALVAMYAQCRCIEDAEKIF 643          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A803PFA8_CANSA (Uncharacterized protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PFA8_CANSA)

HSP 1 Score: 58.5 bits (140), Expect = 4.770e-5
Identity = 59/245 (24.08%), Postives = 100/245 (40.82%), Query Frame = 0
Query:  198 TIRKSQSSTSVVGFEEL-NSFRVDPSLVRPSIVRYLANAEQLSSMQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQ-LMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMV---QTEGLQNSLFAYNALISGCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLAVLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIF 437
            TIR+   S      E L  S + DP + +   +  L  +       +   GM           M+  E+   +G   +V     L+ A   S+ +    +L   L + YGVLP+ V+Y  ++    +A     A E+V   +   L+ +   Y  ++         D A   +N M + G + D T ++  I  +  G    PE   A+++ MR+AGLKP  I  N LM    ++     A ++F
Sbjct:   63 TIRRLAKSRRFTDIEALIESHKKDPKIKQEPYLSTLIRS-------YGRAGMFEQ-------AMKTFEQMDELGTPRSVISFNSLLTACNHSKLFEKVPELFNDLPKKYGVLPDKVSYGILVRSYCEAGTPEKALEIVADMEKNDLEVTAVTYTTIMDALYKKGQADEADKLWNTMLENGCEVDVTAYNVRIMHSHGGE---PETVKAMIEEMRNAGLKPDAISYNYLMTSYCKSGMLDEAKKVF 290          
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Match: A0A3N4I948_ASCIM (Uncharacterized protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4I948_ASCIM)

HSP 1 Score: 57.8 bits (138), Expect = 9.450e-5
Identity = 45/179 (25.14%), Postives = 83/179 (46.37%), Query Frame = 0
Query:  213 ELNSFRVDPSLVRPSIVRYLANAEQLSS--MQFANLGMASSRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQLMRSYGVLPNAVTYTCILAQMSKAKQHHMAAEM-VQTEGLQNSL---FAYNALISG-CTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLI 384
            EL + R D +    +++R +      ++  +   N+  +   H +    + V E AR+ GV  + +    ++   AK+RR    +     MR+ G+ P +VTY  ++  + +      A E+ V+ E   N       YN++I     S R   +A+ Y+N M ++G+KP D T+  LI
Sbjct:  835 ELTANRNDMASYYHNMLRAIGGVASANTYGLYIVNIKTSDVIHDEATEAINVMETARTNGVVASPFLYNAVIGKLAKARRIDDCLFYFNEMRALGLKPTSVTYGTMINALCRVSDDRFAEELFVEMESQPNYKPRPAPYNSIIQHYANSKRDRHKALQYYNQMLRRGIKPTDHTYKLLI 1013          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.44.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5L180_9PHAE2.510e-16957.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7R2_ECTSI1.520e-10051.92Pentatricopeptide repeat-containing protein, putat... [more]
A0A314Z9J6_PRUYE1.680e-525.63Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A8H7QYU9_9FUNG1.770e-536.00Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
UPI0011DF3C042.920e-524.08pentatricopeptide repeat-containing protein At4g36... [more]
M5WFX0_PRUPE3.740e-525.13Uncharacterized protein n=1 Tax=Prunus persica Tax... [more]
A0A251NES6_PRUPE3.770e-525.13Uncharacterized protein n=7 Tax=Prunus TaxID=3754 ... [more]
A0A803PFA8_CANSA4.770e-524.08Uncharacterized protein n=2 Tax=Cannabis sativa Ta... [more]
A0A3N4I948_ASCIM9.450e-525.14Uncharacterized protein n=1 Tax=Ascobolus immersus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 626..654
e-value: 6.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 343..384
e-value: 3.0E-10
score: 40.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 470..530
e-value: 4.8E-11
score: 42.6
coord: 401..459
e-value: 9.7E-7
score: 28.8
coord: 263..318
e-value: 4.4E-5
score: 23.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 485..517
e-value: 2.4E-7
score: 28.5
coord: 450..484
e-value: 5.8E-4
score: 17.9
coord: 344..376
e-value: 6.2E-6
score: 24.1
coord: 280..310
e-value: 6.4E-4
score: 17.7
coord: 520..553
e-value: 6.6E-7
score: 27.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..308
score: 8.900633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 11.158661
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 518..552
score: 10.818861
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 483..517
score: 12.92343
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..482
score: 10.369448
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 623..657
score: 9.437737
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 388..459
e-value: 5.3E-13
score: 50.7
coord: 460..563
e-value: 1.0E-29
score: 105.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..386
e-value: 9.9E-24
score: 86.3
coord: 564..781
e-value: 8.3E-22
score: 79.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 745..790
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..203
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 253..511
coord: 397..728

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:207879..223493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.44.2mRNA_P-littoralis_Contig148.44.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 205853..223670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.44.2 ID=prot_P-littoralis_Contig148.44.2|Name=mRNA_P-littoralis_Contig148.44.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=791bp
MDPEHHEEHLTRYFSPSSCLVRRSTRRVTSTFNPGSRGVYRRHGLVAMLL
VADRSRVVDAFGGVAVGVASTFRIGSTGIGSATPPAEGTSTSRAVEELRR
GGRGEGRSRRMMVRPRSTTLAPATSAGEEQALSGEPKGPNGSAAGEDAAS
KTATLDRDQKDAETGRGTVEAPQRGKPKRLGAVIHRAGRDKRRNEGRTIR
KSQSSTSVVGFEELNSFRVDPSLVRPSIVRYLANAEQLSSMQFANLGMAS
SRHCDIHLTMEVCEKARSMGVRTNVYFMTKLVDAAAKSRRWVTAVQLLQL
MRSYGVLPNAVTYTCILAQMSKAKQHHMAAEMVQTEGLQNSLFAYNALIS
GCTSSRGYDRAMGYFNDMTKQGVKPDDTTFSSLIATTRDGSEQSPERGLA
VLQMMRDAGLKPSTICINSLMAVNVQARQPGTALEIFKEMEKDGVPRDLV
SYNTAIAACDKLGDAEAAVRLLRQAREDDIVPDIFSYNSAISALCHNSLW
QEATKIFEEMHEAGVTPALVTYNTLISGCVRAGAPIEAMSVFSLMKQKRV
KRDQYSFAGGLWASVQLRDHELAMDLLEEMVDMGMPANVEGYATAIRTCA
RCSKGDEAVYVYADQLRMAVVPTKATYKALIEAFAHCKDAERAVWVLDEM
REMQVPIEHWHLMDVMYACTDESHIALEVLRVNEELDLKTAAKMYATALE
VCIAAGDFEAAMTAMEMMYHMDLEPEPEQEKRMLQSCADPLWVAKEERAR
GREEGQEEAGDRKGDGGVDGSDFWREKDTADRLAEEEDMR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf