mRNA_P-littoralis_Contig148.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JXV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV4_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.590e-26 Identity = 91/212 (42.92%), Postives = 115/212 (54.25%), Query Frame = 3
Query: 3 QVARKKSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSR-ERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQTSDP-------PPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEKAALAA 614
QV K YR+ + DL +TR W + IKYPK + ARDW AE A WRPS +R S + V PAP R KRPRDC Q PP R A G+GRPKGSFG KR+ ++ +A + G + A RD S A ML AAV V+K+ ++ R +LK Q+++G+ R A+RKLAK RSQ EKAALAA
Sbjct: 29 QVQGAKQYRLEV--TADLGGVTTR---WRTDCIKYPKSNKKARDWAAEAALAAVWRPSHCDRYATLSKDTSKVE------PAPPRTKRPRDCCQQDLSCGRDHCHTPPAQRA-APAGAGRPKGSFGRKRLHEMMATYKARVEQGQLEFADMHVRDLSTA-MLDAAVEVDKH-EDVWRPAFLKRQSDRGMRRAEALRKLAKHRSQLEKAALAA 226
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 114 bits (285), Expect = 5.780e-26 Identity = 90/201 (44.78%), Postives = 109/201 (54.23%), Query Frame = 3
Query: 18 KSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQ---TSDPPPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEKAALA 611
K YRV L V GS E +W S IK PKG + RDW AE FA WRPS + D + E AP REKRPRDC +++ P GGAR GSGRPKGS+G KR+R Q ++ G A A+RD ML A V ++ E+ +LK Q+N+GVGRK A+RKLAK RSQ EKAA A
Sbjct: 42 KKYRVELTAHVH---GS--EQRWCSPYIKCPKGRNTGRDWAAEDRFAATWRPS---FSSGNVPHTDASAGEAEA-APPREKRPRDCRHAAASTEDAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPG-DMLDAVKEVHQHQ-EVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAA 231
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 114 bits (285), Expect = 8.280e-26 Identity = 90/201 (44.78%), Postives = 109/201 (54.23%), Query Frame = 3
Query: 18 KSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQ---TSDPPPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEKAALA 611
K YRV L V GS E +W S IK PKG + RDW AE FA WRPS + D + E AP REKRPRDC +++ P GGAR GSGRPKGS+G KR+R Q ++ G A A+RD ML A V ++ E+ +LK Q+N+GVGRK A+RKLAK RSQ EKAA A
Sbjct: 42 KKYRVELTAHVH---GS--EQRWCSPYIKCPKGRNTGRDWAAEDRFAATWRPS---FSSGNVPHTDASAGEAEA-APPREKRPRDCRHAAASTEDAPAAKVGGARPGSGRPKGSYGWKRVREAAQQLNDYIERGQPHCALIASRDLPG-DMLDAVKEVHQHQ-EVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAA 231
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JPF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF3_9PHAE) HSP 1 Score: 105 bits (263), Expect = 6.280e-25 Identity = 81/184 (44.02%), Postives = 103/184 (55.98%), Query Frame = 3
Query: 3 QVARKKSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQTSD--PPPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRP-YLKSQANKGV 545
QV K YR++L DL+DGS+ W S IKYPKG ARDW AE +A AWRPS S + D +N+ P P R KRPRDC ++ PPP+ G EG+GRPKG+FG KR+R +L + + G RD S+A ML AA VEK+ E RP +LK Q+N+GV
Sbjct: 29 QVKSAKKYRLQL--TADLSDGSS--SMWRSDYIKYPKGQTKARDWSAEAKWAAAWRPSSSSGSAVLSTE-DARRGSNDTPPPPRGKRPRDCQPAAEILTPPPKRPG--YEGAGRPKGTFGRKRLRAMLDRYRERIELGQVTCGRLEVRDLSSA-MLDAAQEVEKH--EQDWRPAFLKRQSNRGV 202
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 103 bits (256), Expect = 5.900e-22 Identity = 80/184 (43.48%), Postives = 102/184 (55.43%), Query Frame = 3
Query: 3 QVARKKSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQTSD--PPPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRP-YLKSQANKGV 545
QV K YR++L DL+DGS+ W S IKYPKG ARDW AE +A AWRPS S + D +N+ P P R KRPRDC ++ PPP+ G EG+GRPKG+FG KR+R +L + + G RD S+A ML AA VEK+ E RP +LK Q+N+ V
Sbjct: 29 QVKSAKKYRLQL--TADLSDGSS--SMWRSDYIKYPKGQTKARDWSAEAKWAAAWRPSSSSGSAVLSTE-DARRGSNDTPPPPRGKRPRDCQPAAEILTPPPKRPG--YEGAGRPKGTFGRKRLRAMLDRYRERIELGQVTCGRLEVRDLSSA-MLDAAQEVEKH--EQDWRPAFLKRQSNRDV 202
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: D7G0B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B2_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.630e-20 Identity = 65/138 (47.10%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 84 WNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPA-PSREKRPRDCPQTSDP--PPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEK 488
W S + YP+ + ARDWVAE FA+AWRPS G AD + + + PA P REKRPRDC T PP R AREG GRPKGSFG KR+R LLHQ + + G A RD +A MLAA+ +K
Sbjct: 8 WYSEYMGYPESNKKARDWVAEENFAKAWRPSHSS-GSAVLSKADARLRSEDKPALPPREKRPRDCQPTCSAIHTPPAKRA-AREGEGRPKGSFGRKRLRALLHQYKVQVEQGQLTFARLQLRDLGSA-MLAASQEADK 142
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.850e-17 Identity = 63/128 (49.22%), Postives = 77/128 (60.16%), Query Frame = 3
Query: 246 PSREKRPRDCPQ------TSDPPPPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEKAALA 611
P REKR RDC T D PP + RGGAR G+GRPKGS+G KR+R Q +L G Q A +RD A A A ++ E+ R +LK Q+N+GVGRK A+RKLAK RSQ EKAA+A
Sbjct: 113 PPREKRLRDCQHRLCCGITGDAPPGK-RGGARPGAGRPKGSYGRKRLRQAAQQLNYYLERGQLQCAQMVSRDLPGAMSYAVKEAHQQE--EVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAVA 237
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5KLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.890e-17 Identity = 78/204 (38.24%), Postives = 99/204 (48.53%), Query Frame = 3
Query: 33 RLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANE-GPAPSREKRPRDC-PQTSDPPPPEHRGGAREGSGRPKGSFGPKRMRTLLH--------QCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEKAALAA 614
RL DL +TR W + IKYPK + ARDW AE A WRPS A ++ D ++ GPAP R KRPRDC P T ++++LH +A + G + A RD S A ML AAV V+K+ + R +LK Q+N+GV R A+RKLAK RSQ EKAALAA
Sbjct: 24 RLEVTADLGGVTTR---WRTDCIKYPKSNKKARDWAAEAALAAVWRPSH------CDRYATLSKDTSKFGPAPPRFKRPRDCCPATH-------------------------HLQSVLHLQGHEMMATYKARVEQGQLEFADMHVRDLSTA-MLNAAVEVDKH-EYVWRTAFLKRQSNRGVRRAEALRKLAKHRSQLEKAALAA 191
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 6.000e-16 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 3
Query: 246 PSREKRPRDCPQTSDPP---PPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRP-YLKSQANKGVGRKNAIRKLAKKRSQWEKAALA 611
P REKRPRDC ++ PP RGGAR G+GRPKGS+G R+R Q +L G Q A +RD A + A A ++ E+ RP +LK Q+N+G+GRK A+RKLAK +SQ +K A A
Sbjct: 28 PPREKRPRDCQHAAESTGDAPPGKRGGARPGAGRPKGSYGRNRLRQAAQQLNGYLERGQLQCAQMVSRDLPGAMLDAVKEAHQQ---EVVYRPAFLKRQSNRGLGRKEALRKLAKHQSQLQKEAAA 150
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Match: A0A6H5K534_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K534_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.060e-14 Identity = 74/197 (37.56%), Postives = 94/197 (47.72%), Query Frame = 3
Query: 18 KSYRVRLLTAVDLADGSTREHKWNSAAIKYPKG*RSARDWVAEVTFARAWRPSRERVGGDSSMDADVNMDANEGPAPSREKRPRDCPQTSDPP---PPEHRGGAREGSGRPKGSFGPKRMRTLLHQCEAFLRDGMAQSAHDATRDTSAAKMLAAAVAVEKNWAELTRRPYLKSQANKGVGRKNAIRKLAKKRSQWEK 599
K YRV+L V GS +W S K+PKG + RDW AE +A WRP + DV E AP REK DC ++ PP RGGAR G+GRPKGS+G KR+R Q L G Q A +RD A ++ AV E R +LK Q+N+G+ + A A RS WE+
Sbjct: 51 KKYRVQLTAQVH---GS--RQRWCSPYNKFPKGRTTGRDWAAEDRWAATWRPF---FCSGNVPHNDVRAREAEA-APPREKWQPDCQHAAESTGDAPPGKRGGARPGAGRPKGSYGRKRLRQAAQQLNDDLERGKLQCAQMVSRDLPGA--MSDAVKEAHQQEEACRPAFLKRQSNRGL--EKAAAASAACRSGWER 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.31.1 >prot_P-littoralis_Contig148.31.1 ID=prot_P-littoralis_Contig148.31.1|Name=mRNA_P-littoralis_Contig148.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp MDADVNMDANEGPAPSREKRPRDCPQTSDPPPPEHRGGAREGSGRPKGSFback to top mRNA from alignment at P-littoralis_Contig148:120630..121246- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.31.1 ID=mRNA_P-littoralis_Contig148.31.1|Name=mRNA_P-littoralis_Contig148.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=617bp|location=Sequence derived from alignment at P-littoralis_Contig148:120630..121246- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:120630..121246- >mRNA_P-littoralis_Contig148.31.1 ID=mRNA_P-littoralis_Contig148.31.1|Name=mRNA_P-littoralis_Contig148.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=414bp|location=Sequence derived from alignment at P-littoralis_Contig148:120630..121246- (Pylaiella littoralis U1_48)back to top |