prot_P-littoralis_Contig148.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.20.1
Unique Nameprot_P-littoralis_Contig148.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length216
Homology
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 1.050e-125
Identity = 178/215 (82.79%), Postives = 198/215 (92.09%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            MFLGTAATLIASS+AFV PMAVRS +P +S+S+LKMSAGSDYVA+LPGAPF DGKIFDPL L+DGA   ++KLWREAE+KHGRVAMLA +G++VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KPK Q  LE MQTKELNNGRLAMIG+AGMLVQELVNPADILG
Sbjct:    7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 2.910e-125
Identity = 176/215 (81.86%), Postives = 199/215 (92.56%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            +FLG+AATLIASS+AFV PMAVRS +P +SSS+LKMSAGSDYVA+LPGAPF DGKIFDPL L+DGA+  D+K WREAE+KHGRVAMLA+LG+LVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFW FSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP+ + AL+VM+TKELNNGRLAMIG+AGMLVQEL+NPADILG
Sbjct:    6 LFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 2.790e-117
Identity = 170/214 (79.44%), Postives = 192/214 (89.72%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 214
            MFLGTAA LIASS+AFV P+AVRS +P +++S+LKMSAGSDYVA+LPGAPFSDGKIFDPL L+DGA   D+K WREAE+KHGRVAMLA+LGILVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVN  DIL
Sbjct:    6 MFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 9.760e-112
Identity = 164/215 (76.28%), Postives = 190/215 (88.37%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            MFLGTAATLIASS+AFV PMAVRS +P +S+S+LKMSAG+DY+A+LPGA   +GKIFD L LADGA+  ++KLWREAE+KHGRVAMLA +G++VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FWA+SLLGMAFIEYNTI  AYA PS VTGEGGL+++YSPGDLGFDP  IKPK Q  LE MQ KELNNGRLAMIG+ GMLVQELVN  DILG
Sbjct:    7 MFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 9.440e-97
Identity = 152/215 (70.70%), Postives = 170/215 (79.07%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            MF+GTAATLIASS+AFV PMAVRS++ T SS  LKMSAGSDYVA+LPGAPFSDGKIFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE                            FWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    6 MFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.940e-95
Identity = 134/160 (83.75%), Postives = 147/160 (91.88%), Query Frame = 0
Query:   55 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 214
            KIFDPLGLADGA V D+KLWREAE+KHGRVAMLA+LG+LVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFWAFSLL +A IEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KP  Q ALE MQTKELNNGRLAMIG+AG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 5.120e-95
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 0
Query:   55 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            +IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAF+EYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 2.690e-93
Identity = 178/387 (45.99%), Postives = 199/387 (51.42%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAVRSLS-PTASSSSLKMSAGSDYVASLPGAPFSDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            MF+GTAATLIASS+AFV P+AVRS++  T SSSSL MSAGSDYVA+LPGAPFSDGK                                                                                                                                                                           IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    6 MFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 9.600e-84
Identity = 123/213 (57.75%), Postives = 167/213 (78.40%), Query Frame = 0
Query:    3 LGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 215
            +G A+   AS  AF+ P    +LS   +S++ +MSAGSDYV++LPGAPF+DGK++DP+GL+  A+ +D+K WREAE+KHGRVAMLA++G+LVAE +HP F+GPDYIGPA+ HF+EI+A++P+FWA +LL +A++EY  I   +A    VTGEGG++ DY PGDLGFDPL + P+ +  L VM+TKELN+GRLAMIG+ GM+VQELV P  I G
Sbjct:   60 VGMASWCFASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 6.150e-78
Identity = 131/219 (59.82%), Postives = 164/219 (74.89%), Query Frame = 0
Query:    1 MFLGTAATLIASSSAFVGPMAV--RSLSPTASSSSLKMSAGSDYVASLPGAPF---SDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 214
            +FLGTAATLIASS+AFV P+A    S++  A+SS+ KM+AGSDY ASLPGAPF   ++GK FDP GLA   + + +K WREAELKHGRV+MLAA+GILV+E +HP FMGP YIGPAV+H Q+I+  YP FW  SL  +AFIE  TI  A+ + S VTG G LK +Y PGDLGFDPL + PK  E   ++Q++EL+ GR AMIGV GM+VQE+V+   IL
Sbjct:    6 LFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S1_ECTSI1.050e-12582.79Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI2.910e-12581.86Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI2.790e-11779.44Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI9.760e-11276.28Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE9.440e-9770.70LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7Q7_ECTSI1.940e-9583.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI5.120e-9581.99Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE2.690e-9345.99LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G5B4_ECTSI9.600e-8457.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI6.150e-7859.82Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 46..206
e-value: 6.0E-37
score: 127.7
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 33..215
e-value: 2.1E-39
score: 137.4
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 7..211
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 53..214
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 7..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:59643..62190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.20.1mRNA_P-littoralis_Contig148.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 59625..63692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.20.1 ID=prot_P-littoralis_Contig148.20.1|Name=mRNA_P-littoralis_Contig148.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAP
FSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHP
FFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSV
VTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVA
GMLVQELVNPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln