mRNA_P-littoralis_Contig148.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig148.20.1
Unique NamemRNA_P-littoralis_Contig148.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 2.220e-119
Identity = 178/217 (82.03%), Postives = 201/217 (92.63%), Query Frame = 1 
Query:   13 TQMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            TQ+FLG+AATLIASS+AFV PMAVRS +P +SSS+LKMSAGSDYVA+LPGAPF DGKIFDPL L+DGA+  D+K WREAE+KHGRVAMLA+LG+LVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFW FSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP+ + AL+VM+TKELNNGRLAMIG+AGMLVQEL+NPADILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 6.480e-119
Identity = 179/218 (82.11%), Postives = 200/218 (91.74%), Query Frame = 1 
Query:   10 STQMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            S+ MFLGTAATLIASS+AFV PMAVRS +P +S+S+LKMSAGSDYVA+LPGAPF DGKIFDPL L+DGA   ++KLWREAE+KHGRVAMLA +G++VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KPK Q  LE MQTKELNNGRLAMIG+AGMLVQELVNPADILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 8.640e-111
Identity = 171/215 (79.53%), Postives = 193/215 (89.77%), Query Frame = 1 
Query:   16 QMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 660
            QMFLGTAA LIASS+AFV P+AVRS +P +++S+LKMSAGSDYVA+LPGAPFSDGKIFDPL L+DGA   D+K WREAE+KHGRVAMLA+LGILVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVN  DIL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 3.300e-105
Identity = 165/218 (75.69%), Postives = 192/218 (88.07%), Query Frame = 1 
Query:   10 STQMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            S+ MFLGTAATLIASS+AFV PMAVRS +P +S+S+LKMSAG+DY+A+LPGA   +GKIFD L LADGA+  ++KLWREAE+KHGRVAMLA +G++VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FWA+SLLGMAFIEYNTI  AYA PS VTGEGGL+++YSPGDLGFDP  IKPK Q  LE MQ KELNNGRLAMIG+ GMLVQELVN  DILG
Sbjct:    4 SSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
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BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 7.030e-91
Identity = 153/216 (70.83%), Postives = 171/216 (79.17%), Query Frame = 1 
Query:   16 QMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            QMF+GTAATLIASS+AFV PMAVRS++ T SS  LKMSAGSDYVA+LPGAPFSDGKIFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE                            FWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 7.240e-89
Identity = 134/160 (83.75%), Postives = 147/160 (91.88%), Query Frame = 1 
Query:  181 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 660
            KIFDPLGLADGA V D+KLWREAE+KHGRVAMLA+LG+LVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFWAFSLL +A IEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KP  Q ALE MQTKELNNGRLAMIG+AG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.340e-88
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 1 
Query:  181 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            +IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAF+EYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.960e-87
Identity = 179/388 (46.13%), Postives = 200/388 (51.55%), Query Frame = 1 
Query:   16 QMFLGTAATLIASSSAFVGPMAVRSLS-PTASSSSLKMSAGSDYVASLPGAPFSDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            QMF+GTAATLIASS+AFV P+AVRS++  T SSSSL MSAGSDYVA+LPGAPFSDGK                                                                                                                                                                           IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PS VTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.170e-78
Identity = 126/219 (57.53%), Postives = 170/219 (77.63%), Query Frame = 1 
Query:    7 TSTQMFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 663
            TST   +G A+   AS  AF+ P    +LS   +S++ +MSAGSDYV++LPGAPF+DGK++DP+GL+  A+ +D+K WREAE+KHGRVAMLA++G+LVAE +HP F+GPDYIGPA+ HF+EI+A++P+FWA +LL +A++EY  I   +A    VTGEGG++ DY PGDLGFDPL + P+ +  L VM+TKELN+GRLAMIG+ GM+VQELV P  I G
Sbjct:   54 TSTGALVGMASWCFASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.730e-72
Identity = 132/220 (60.00%), Postives = 165/220 (75.00%), Query Frame = 1 
Query:   16 QMFLGTAATLIASSSAFVGPMAV--RSLSPTASSSSLKMSAGSDYVASLPGAPF---SDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSVVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 660
            Q+FLGTAATLIASS+AFV P+A    S++  A+SS+ KM+AGSDY ASLPGAPF   ++GK FDP GLA   + + +K WREAELKHGRV+MLAA+GILV+E +HP FMGP YIGPAV+H Q+I+  YP FW  SL  +AFIE  TI  A+ + S VTG G LK +Y PGDLGFDPL + PK  E   ++Q++EL+ GR AMIGV GM+VQE+V+   IL
Sbjct:    5 QLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI2.220e-11982.03Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI6.480e-11982.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI8.640e-11179.53Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI3.300e-10575.69Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE7.030e-9170.83LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7Q7_ECTSI7.240e-8983.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI1.340e-8881.99Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE1.960e-8746.13LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G5B4_ECTSI1.170e-7857.53Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI1.730e-7260.00Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:59625..63692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7S3
PFAMsChloroa_b-bind
Model size2168
Max annot lvl2759|Eukaryota
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
Exons4
Evalue7.08e-128
EggNOG OGs2BEWM@1|root,2S15M@2759|Eukaryota
DescriptionChlorophyll A-B binding protein
Cds size648
COG categoryU
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.20.1prot_P-littoralis_Contig148.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig148 59643..62190 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789697.117522-UTR-P-littoralis_Contig148:59624..596421680789697.117522-UTR-P-littoralis_Contig148:59624..59642Pylaiella littoralis U1_48UTRP-littoralis_Contig148 59625..59642 +
1680789697.1728914-UTR-P-littoralis_Contig148:62190..636921680789697.1728914-UTR-P-littoralis_Contig148:62190..63692Pylaiella littoralis U1_48UTRP-littoralis_Contig148 62191..63692 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789697.1303854-CDS-P-littoralis_Contig148:59642..598071680789697.1303854-CDS-P-littoralis_Contig148:59642..59807Pylaiella littoralis U1_48CDSP-littoralis_Contig148 59643..59807 +
1680789697.1390567-CDS-P-littoralis_Contig148:60289..604121680789697.1390567-CDS-P-littoralis_Contig148:60289..60412Pylaiella littoralis U1_48CDSP-littoralis_Contig148 60290..60412 +
1680789697.147427-CDS-P-littoralis_Contig148:61504..615881680789697.147427-CDS-P-littoralis_Contig148:61504..61588Pylaiella littoralis U1_48CDSP-littoralis_Contig148 61505..61588 +
1680789697.1585486-CDS-P-littoralis_Contig148:61914..621901680789697.1585486-CDS-P-littoralis_Contig148:61914..62190Pylaiella littoralis U1_48CDSP-littoralis_Contig148 61915..62190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig148.20.1

>prot_P-littoralis_Contig148.20.1 ID=prot_P-littoralis_Contig148.20.1|Name=mRNA_P-littoralis_Contig148.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
MFLGTAATLIASSSAFVGPMAVRSLSPTASSSSLKMSAGSDYVASLPGAP
FSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHP
FFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSV
VTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVA
GMLVQELVNPADILG*
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mRNA from alignment at P-littoralis_Contig148:59625..63692+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig148.20.1 ID=mRNA_P-littoralis_Contig148.20.1|Name=mRNA_P-littoralis_Contig148.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4068bp|location=Sequence derived from alignment at P-littoralis_Contig148:59625..63692+ (Pylaiella littoralis U1_48)
ATTTCCACCTCTACCCAGATGTTCCTCGGCACCGCCGCCACCCTTATCGC
CTCGTCATCTGCGTTCGTCGGGCCGATGGCCGTCCGATCTCTGTCGCCGA
CTGCATCCTCGTCGAGCCTCAAGATGAGCGCCGGATCAGACTACGTTGCA
TCCCTGCCCGGTGCACCATTCTCTGACGGAAAGGTAAGCGACTGCAGCTT
TGCGATCACTGCCGTGTAATGTATTCGAAATCCCGAAAGATGCTCTGCCT
GTTTCTCGTGAATCGCTATTTCTGTTCGTTTACTCGCTGAGTCAAGCCAC
ACCACATACCTGGTAGTCCATTTATTGTCTTTTTCTTCTTATTCCTCCTA
GCACGATATGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTG
CGCTAATGCGAATCAACATTACTTACCTGTCGACGAGATGAATCTGTCCT
GCCTCTAGTCCGGTAAAGAGCGTTTTTCACGCGTCGGTATCTCTCTACTG
CTCTGACGTACTTTTCATGTCGTCACACAAATCAACCCAGGACCCCTCAC
TGCTGACACTGTACGCGAATGCATTCTCCACCTTCCAAAATACGAAGTAC
CAGGCTGCACCTCTGACTCGTTATCCACCCTTTTACTTTTCTTTACGCTG
CTCCGTCTGGTTTAGATATTCGACCCTCTCGGCTTGGCGGACGGCGCCAA
CGTGAAGGATGTTAAACTCTGGCGTGAGGCCGAGCTCAAGCACGGACGCG
TGGCCATGCTCGCAGCACTTGGTATCCTCGTGGCAGAGGTAAGAAATAAG
TATCATGTTGACTTGTTCTCACATGGGTAGCGGGCCGAACACAACGCCGC
ATCGACGTCTGGTGTGTGAGGTTTTCGGAAACACTTGAGGGACTTCATAT
AACCCTCTTGAGTTCCCAAAAAAATTCTTGTCTTCCATGCATAACACAAA
CAGAAGACGACCTTCCCGCGCGAATGAAACCGATGGTTCTCGGGTCCGTA
GAATACATCATCTAGAGGCGACGTGCGTGTTGGCAACATCACAGCTTTCG
ATGGGGCCGAGACATCGATGGTCGACGGTATGTGGTGTGCAGCAGCCCAA
AAACCGCCCGCACCTGGTCCAGGAACAAAACATCTTCCATGATCTTCCAC
TGTGGTACCCGCCTCTATGGGCCCCGATCTCCTGAACTGAGAGTAATCTA
GACAGCAAGTGGAATGAGCTACTGCTGTAGACCCGAAGTTCAGGAGATCT
CTTGAACTGATGTCTAGGCAGCAAGTGGTATGAGCTTTTGCTGTGGACGC
GAAGTTCAGGAGATTGCGGCCAATCACCGATTTCACAGCCCCAGCGGAAG
ATTTGAGCCACTGTAGTCAACACACATGGCGATTCTACGTGATGTCCCCT
ACTGATGTATATTTCAAGGAAATCATCTCTATGAGGGATGGAGCAACGCC
CACCCGTGAAACACACTTGACCTACGCCTTCTCGTACCGACTCGGTGAAA
ATATCTCAAATGGTGCCGGTAAAACCCTTTCTGCTTTGGTGCATGCACTG
CCTTATCTCATTCGTCTGTAGCAGTTGCAGTTTGTTCATCCCGGCAACCA
TGTGGGCGTGGTTGGATGTTGAGCCTGTCGATAACACAAACCTTTCAGGC
GACTTCAGCCGTTGGCTTAGGGCACCATTCGACTTTCGCGCTGTACATCT
ACCGCACCAAAGCCACGATCCGGTCCTAATGCGGAATGCTCCTGGGCGAC
ATGCGGATCCGTGTGAAATGGAAAAACGGATGTGTTCAACGTCGCAATGA
GCTTGCCCTCTGAACCCGCGTACTGCTGTCGCTTTTGCATTACATATGTT
CCCGTTTTCCGTTCTCTGTTTTCCCTGCAGGAGTACCACCCGTTCTTCAT
GGGCCCCGACTACATCGGCCCCGCCGTGGACCACTTCCAGGAGATCTCCG
CTCAGTACCCGGAGGTGAGGAAGGAAAATAACTCTAAACACACGCTAACT
CGACATGAACGGGACACCCGATTCCCTCACCGTACGTTAAAAGCTACGCC
TGGAACGTAGCGCATTTAACAACATTTCGCCTGGTTTACTTTTGTCGGGC
ATAAACGCCGAGTGCCGGGAATGTGTTGGACGTACTTTTCATTGTTGTCG
TTTGCGTTCCTCAAGTGGTTCCTGAAATAACGAGGACCAGATTAATCGTG
ATTGCCGATGCCTATTGCGCTCCCCTCACTCGGACGTGTCGTTTCCCTGC
CCTTACGTTTTCTCTTCCCTCGTGACTGGTCTTCCTATAGTTCTGGGCCT
TCTCCCTCTTGGGAATGGCGTTCATCGAGTACAACACCATCACCACGGCG
TACGCGTCGCCTAGCGTGGTTACCGGCGAAGGCGGCCTCAAGGAGGACTA
CAGCCCGGGAGACCTCGGCTTCGACCCCCTGAACATCAAGCCCAAGTCCC
AGGAGGCCCTCGAAGTGATGCAGACCAAGGAGCTCAACAACGGGCGTCTC
GCGATGATCGGCGTTGCCGGCATGTTGGTTCAAGAGTTGGTGAACCCGGC
CGACATCCTCGGCTAAATTTACTGGAATTACTTCGTACTTTGTACCTTGC
CTTGTGTATGTTGAAGTATCTTCCCAACATGTATGTTGCTGTACGAAATC
AGGCTATTAAATGAAGGTGGTCAACGGGTTTGTCATCTCGAAATTTTTGA
ATCCCGGTTAGGGTTTTATTTTTCTTTTCGTCACTTTATTTTTCTAAAAA
ATTATCTTTTCATGCTTCCTCGTAGTGTTGATAAGAGTGGGAAGGGTTCT
TCTCATCCAAAGCAATTGGAACAGATCCAGAGCAGTGTTTTGGCACACGG
TCCATCCTTTGTGTCCAGTGGAGGGTAGCCATCGTGAAATCGGGTGGCGG
GGAACTTGGCGGGTGTGCCGTTGTACTGAGAGCATCGGAACTTGAATTAT
ATGCATTCGAGAAGGATGTACGTGTTTCGTGGTGTCCGTGGACTTGACTA
TGCTGTCGAACATGAGTTGTTCCCGAGTACTTCGAATCAGATGCTAGCTC
GGTAAATAGCATACGACAAAACCACTCTCGTGACCATATGATGAGGCATC
GCGCGAACAGAACAGCGTTTGTCGCGCTGCTTATGTTTTGTGGATGACGC
AGATTCCAGTCGAAGTAAACGGTAAAATATCATTTTACTCTGGTAAATTG
ATGTGCTATGACCGCGGTTGGACCGCTTCGAGCTCCGCACGTATCTAGTA
TCTGAAAATGCGGTTGAACTTGCCATGTTCAAGAGCCATGGAGGCGACCG
TGTGCCCACAAAACAAAAAAAGCCTCGAAATGTTGGTAGCTTGCGCCCGT
TCAAAACTGAACGTACAAGTGCAGAATTGAGCTTCATGCACTCGTAGTGT
AATTGCGAGAGCGTACGGTGATGATCTTGAAGATAAACTCAGTTTTGTCT
CCTTGATGGGTATATTCCCTGACCTCGATGAATTCCATCTGGAGAGAACT
GTCTGTTGCGCGTCGTGTCATGACAAGTGTAATATTTACACATCAATTTA
CCAAAGTATAAATTTAACATAGTGTACTAAACCCTGCTGCGGTACTGTCG
CATCATTTAGATTACAACATTGTCATCTGCGCTAGGGAAAAAGCGAAAAA
AGGTCGCAAACGTCTTTGAATACTGGATCTGAAGGTTTGGTGATGTAAGG
ACCAAATTAGGGGGCTGAAAAAAGCAACCCACCTTCTGGGAAACATGTAA
CATTGTGGGTTAGAAAGTTGGTCAGTCCTAGTTTGTCTGAGAAGCGTGCA
AGAACGGGATATGTACGTCGAAAGTATAGTACAGCCGAGAAGGAGGGCTG
CAGCATCGCGAGACACTCTCGCTTACAGCGCACACCGTAGCACGGAATGC
CAAACACACTCTCAGGTGGTTCCACGCACAAAGATAAAAAGTACCGCTAC
TGTACCAGCATCGGTAGGTGTCCATGCCAAAATCGTCGAGAGAATCTAGA
ATCTAATGGTGACCACGTCTATCCGCGGAACGGGTACAGCAGTACCCAAA
CAGGATGATAAATATCAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig148:59625..63692+

>mRNA_P-littoralis_Contig148.20.1 ID=mRNA_P-littoralis_Contig148.20.1|Name=mRNA_P-littoralis_Contig148.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig148:59625..63692+ (Pylaiella littoralis U1_48)
ATGTTCCTCGGCACCGCCGCCACCCTTATCGCCTCGTCATCTGCGTTCGT
CGGGCCGATGGCCGTCCGATCTCTGTCGCCGACTGCATCCTCGTCGAGCC
TCAAGATGAGCGCCGGATCAGACTACGTTGCATCCCTGCCCGGTGCACCA
TTCTCTGACGGAAAGATATTCGACCCTCTCGGCTTGGCGGACGGCGCCAA
CGTGAAGGATGTTAAACTCTGGCGTGAGGCCGAGCTCAAGCACGGACGCG
TGGCCATGCTCGCAGCACTTGGTATCCTCGTGGCAGAGGAGTACCACCCG
TTCTTCATGGGCCCCGACTACATCGGCCCCGCCGTGGACCACTTCCAGGA
GATCTCCGCTCAGTACCCGGAGTTCTGGGCCTTCTCCCTCTTGGGAATGG
CGTTCATCGAGTACAACACCATCACCACGGCGTACGCGTCGCCTAGCGTG
GTTACCGGCGAAGGCGGCCTCAAGGAGGACTACAGCCCGGGAGACCTCGG
CTTCGACCCCCTGAACATCAAGCCCAAGTCCCAGGAGGCCCTCGAAGTGA
TGCAGACCAAGGAGCTCAACAACGGGCGTCTCGCGATGATCGGCGTTGCC
GGCATGTTGGTTCAAGAGTTGGTGAACCCGGCCGACATCCTCGGCTAA
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