prot_P-littoralis_Contig148.16.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.16.2
Unique Nameprot_P-littoralis_Contig148.16.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 3.770e-132
Identity = 190/216 (87.96%), Postives = 205/216 (94.91%), Query Frame = 0
Query:    7 QMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            Q+FL +AA LIASS AF+AP+AVRSA P SSSS+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGADP+DIKKWREAEIKHGRVAMLA+LGVLVAE+YHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTI TAF+TPSAVTGEGGLKEDY PGDLGFDPL +KP+DE AL+VM+TKELNNGRLAMIGIAGMLVQEL+NPA+ILG
Sbjct:    5 QLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 7.330e-124
Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 0
Query:    7 QMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANIL 221
            QMFL TAAALIASS AF+AP+AVRSA P S++S+LKMSAGSDYVATLPGAPFSDGKIFDPL LSDGA P DIKKWREAEIKHGRVAMLA+LG+LVAEEYHPLFMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP  E AL+VM+TKELNNGRLAMIGIAGML QELVN  +IL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 1.890e-123
Identity = 180/221 (81.45%), Postives = 199/221 (90.05%), Query Frame = 0
Query:    2 MSTSAQMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            M  S+ MFL TAA LIASS AF+AP+AVRSA P SS+S+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA+P +IK WREAEIKHGRVAMLA +GV+VAE+YHPLFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIT A+  PS VTGEGGL+++YSPGDLGFDPL +KP+D+  LE MQTKELNNGRLAMIGIAGMLVQELVNPA+ILG
Sbjct:    1 MVASSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 3.510e-109
Identity = 164/221 (74.21%), Postives = 190/221 (85.97%), Query Frame = 0
Query:    2 MSTSAQMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            M+ S+ MFL TAA LIASSAAF+ P+AVRSA P SS+S+LKMSAG+DY+ATLPGA   +GKIFD L L+DGADP +IK WREAEIKHGRVAMLA +GV+VAE+YHP FMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI  A+  PS VTGEGGL+++YSPGDLGFDP  IKP+D+  LE MQ KELNNGRLAMIGI GMLVQELVN  +ILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 1.940e-100
Identity = 161/216 (74.54%), Postives = 170/216 (78.70%), Query Frame = 0
Query:    7 QMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            QMF+ TAA LIASS AF+AP+AVRS T   SS  LKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGA P DIKKWREAEIKHGRVAMLA+LGV+VAE                            FW FSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 9.040e-100
Identity = 141/161 (87.58%), Postives = 151/161 (93.79%), Query Frame = 0
Query:   62 KIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            +IFDPLGLSDGA P DIKKWREAEIKHGRVAMLA+LGV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 2.910e-97
Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0
Query:   62 KIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            +IFDPLGLSDGA P DIKKWREAEIKHGRVAMLA+LGV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI TAFDTPSAVTGEGGLKEDY PGDLGFDPL +KP DE AL+VM+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 4.650e-91
Identity = 131/160 (81.88%), Postives = 143/160 (89.38%), Query Frame = 0
Query:   62 KIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANIL 221
            KIFDPLGL+DGA+  DIK WREAEIKHGRVAMLA+LGVLVAEEYHP FMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTIT A+  PS VTGEGGL+++YSPGDLGFDPL +KP D+ ALE MQTKELNNGRLAMIGIAG LVQELVNP NIL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.750e-88
Identity = 135/206 (65.53%), Postives = 165/206 (80.10%), Query Frame = 0
Query:   18 ASSAAFIAPIAVR-SATPVSSSSSLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANILG 222
            AS  AFI P     SA P S+++  +MSAGSDYV+TLPGAPF+DGK++DP+GLS  ADP DIKKWREAEIKHGRVAMLA++GVLVAE +HPLF+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   F     VTGEGG++ DY PGDLGFDPLG+ P+DE  L VM+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   68 ASCEAFIVPTPTTLSARPTSTAA--RMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 3.660e-81
Identity = 135/220 (61.36%), Postives = 168/220 (76.36%), Query Frame = 0
Query:    7 QMFLATAAALIASSAAFIAPIAV--RSATPVSSSSSLKMSAGSDYVATLPGAPF---SDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVLVAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITTAFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGRLAMIGIAGMLVQELVNPANIL 221
            Q+FL TAA LIASSAAF+APIA    S   V++SS+ KM+AGSDY A+LPGAPF   ++GK FDP GL+   DP  IKKWREAE+KHGRV+MLAA+G+LV+E +HPLFMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPLG+ P+D E   ++Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    5 QLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.16.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI3.770e-13287.96Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI7.330e-12484.65Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI1.890e-12381.45Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S0_ECTSI3.510e-10974.21Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE1.940e-10074.54LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI9.040e-10087.58Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE2.910e-9788.20LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI4.650e-9181.88Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI1.750e-8865.53Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI3.660e-8161.36Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 53..213
e-value: 5.0E-39
score: 134.4
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 39..222
e-value: 4.3E-42
score: 146.2
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 2..220
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 60..221
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 2..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:54618..59161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.16.2mRNA_P-littoralis_Contig148.16.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 53834..59327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.16.2 ID=prot_P-littoralis_Contig148.16.2|Name=mRNA_P-littoralis_Contig148.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MMSTSAQMFLATAAALIASSAAFIAPIAVRSATPVSSSSSLKMSAGSDYV
ATLPGAPFSDGKIFDPLGLSDGADPSDIKKWREAEIKHGRVAMLAALGVL
VAEEYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTITT
AFDTPSAVTGEGGLKEDYSPGDLGFDPLGIKPQDEEALEVMQTKELNNGR
LAMIGIAGMLVQELVNPANILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln