mRNA_P-littoralis_Contig1476.3.9 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 194 bits (493), Expect = 2.810e-54 Identity = 94/135 (69.63%), Postives = 107/135 (79.26%), Query Frame = 1
Query: 1 AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNI 405
AADLKA E +R ++ KY E+C E P +QGDA+H+FLI TR LLD KLP S+ R LLNDLIQGNLAKG+GRGYRFH STL+FCIYYSGVAGT AYNALREVLHLP PSHIR+LR +AVP SG+L DNI
Sbjct: 171 AADLKATQEKQQRLEQKTMKYLEECREFPDDQGDAIHKFLIADSTRTLLDKKLPAESDERTLLNDLIQGNLAKGNGRGYRFHESTLRFCIYYSGVAGTAAYNALREVLHLPFPSHIRHLREKAVPPGSGVLVDNI 305
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.230e-49 Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 1 AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPS 336
A +KAANE ERW VK+YRE+C E P++QGDAVH+FLI +TR+LLD KLPP SE RALLNDLIQGNL+KGDGRGYRFH ST+KFCIYYSGVAGTGAYNALR V+HLPS
Sbjct: 196 ATSMKAANEPAERWHRKVKQYREECIEFPKDQGDAVHKFLIDQETRELLDKKLPPKSEQRALLNDLIQGNLSKGDGRGYRFHLSTMKFCIYYSGVAGTGAYNALRSVVHLPS 307
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.430e-33 Identity = 59/135 (43.70%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1 AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNI 405
AADL A R +E + R++C +P EQG+A+H+FL+ +T++++ S+LP GS+ R D ++ N + G +G+RFHP+T++ IY G+AGT AYN L VLHLPSP I+ LR A P ++G+L +NI
Sbjct: 340 AADLNRERNATARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLTENI 474
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 135 bits (339), Expect = 3.050e-33 Identity = 59/135 (43.70%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1 AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNI 405
AADL R +E + R++C +P EQG+A+H+FL+ +T++++ S+LP GS+ R D ++ N + G +G+RFHP+T++ IY G+AGT AYN LR VLHLPSP I+ LR A P ++G+L +NI
Sbjct: 382 AADLNRERTTTARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENI 516
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 130 bits (328), Expect = 9.030e-32 Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 1 AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNI 405
AA L A R +E + R++C +P EQG+A+H+FL+ +T++++ S+LP GS+ R D ++ N + G +G+RFHP+T++ IY G+AGT AYN LR VLHLPSP I+ LR A P ++ +L +NI
Sbjct: 473 AASLNRERNATVRLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENI 607
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI) HSP 1 Score: 117 bits (293), Expect = 7.150e-29 Identity = 52/135 (38.52%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 7 DLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDSKLPPGSEHRALLNDLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNIKE 411
++K+ E R ++ V R++ + +QG A+HE L+ P++R + + KLP S RA+ D ++ N +G+RFHP+TL+ IY GVAG+ YN LR +HLPSP ++ L+A+A P ++G+L DNI++
Sbjct: 2 EVKSQKEGKIRLQDRVLAARKESERINDQQGAALHELLLDPESRTIFEKKLPEDSAQRAIFEDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLVDNIRK 136
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.830e-18 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 3
Query: 408 GNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLG 566
GNFGRS+YARK GLDK GYI SADDSKLEELMDILRFF++WR +LE + TLG
Sbjct: 24 GNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLG 76
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.620e-18 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3
Query: 387 LALR*HQGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGD 569
+ +R H GNFGRS+YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD
Sbjct: 30 VCVRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD 90
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 1.860e-15 Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 193 DLIQGNLAKGDGRGYRFHPSTLKFCIYYSGVAGTGAYNALREVLHLPSPSHIRNLRARAVPGQSGLLFDNI 405
D ++ N + G +G+RFHP+T++ IY G+AGT AYN L VLHLPSP I+ LR A P ++G+L +NI
Sbjct: 304 DQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENI 374
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.620e-9 Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 3
Query: 459 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGD 569
AGYI SADDSKLEELMDILRF +WR +LE ++TLGD
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGD 38 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1476.3.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1476.3.9 >prot_P-littoralis_Contig1476.3.9 ID=prot_P-littoralis_Contig1476.3.9|Name=mRNA_P-littoralis_Contig1476.3.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp AADLKAANEANERWKETVKKYREKCTELPQEQGDAVHEFLIHPDTRKLLDback to top mRNA from alignment at P-littoralis_Contig1476:7502..11639+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1476.3.9 ID=mRNA_P-littoralis_Contig1476.3.9|Name=mRNA_P-littoralis_Contig1476.3.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=4138bp|location=Sequence derived from alignment at P-littoralis_Contig1476:7502..11639+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1476:7502..11639+ >mRNA_P-littoralis_Contig1476.3.9 ID=mRNA_P-littoralis_Contig1476.3.9|Name=mRNA_P-littoralis_Contig1476.3.9|organism=Pylaiella littoralis U1_48|type=CDS|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig1476:7502..11639+ (Pylaiella littoralis U1_48)back to top |