mRNA_P-littoralis_Contig1470.7.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A2D8LJR9_9FLAO (Uncharacterized protein n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LJR9_9FLAO) HSP 1 Score: 352 bits (903), Expect = 2.480e-118 Identity = 160/171 (93.57%), Postives = 165/171 (96.49%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P PGRPNKGNFDMNIWKTEWNNE WSEPVPLPPHINKVQAEGEEWPLHNLSYFYT+DGFQFYTGSLVK AKGMDIFTTTLTDGEFT LEPL +T+NTE+FWEYAPILSPDGNYLFTQVYKR DGLGGDDIYVSKQDENGNWLPSKNLGPLVNS+QNECPAGFSPDGSYFLF
Sbjct: 115 PIPGRPNKGNFDMNIWKTEWNNENWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTIDGFQFYTGSLVKSAKGMDIFTTTLTDGEFTALEPLPATVNTEEFWEYAPILSPDGNYLFTQVYKRYDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSKQNECPAGFSPDGSYFLF 285
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A1H1RDC7_9FLAO (WD40-like Beta Propeller Repeat n=1 Tax=Formosa sp. Hel1_31_208 TaxID=1798225 RepID=A0A1H1RDC7_9FLAO) HSP 1 Score: 230 bits (587), Expect = 1.560e-70 Identity = 112/218 (51.38%), Postives = 142/218 (65.14%), Query Frame = 3
Query: 201 RWQTENL*NFLSQ*TMDRTENCFVFNRPR*NRTVYTQWQDSLLRKRAPHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
+W T + +F + DR E+ F++ RTVY P P + N G FDMN+WKTEW N W++P+PL INKVQ EGE WP N+S+F T D FYTG+ V+G KG+DI+ TT +F L+ LSS IN E WEYAPI+S DGNYLFTQ+Y R+DG+GGDDI+VSK+D G W+PSKNLG L+N+ NECPA + DG YF F
Sbjct: 83 QWNTPQIVSFSN----DRDESPH-FSKD--GRTVY-------FGSERPIPNQTNLGGFDMNVWKTEWVNGAWTKPIPLSNTINKVQIEGENWPSSNVSHFVTSDDITFYTGTQVRGTKGLDIYQTTYDGADFKALKKLSSAINREDKWEYAPIISADGNYLFTQIYNREDGIGGDDIFVSKKDVEGKWMPSKNLGELINTNMNECPAAMTSDGKYFFF 286
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A6P0UE86_9FLAO (Uncharacterized protein n=1 Tax=Muriicola jejuensis TaxID=504488 RepID=A0A6P0UE86_9FLAO) HSP 1 Score: 219 bits (559), Expect = 2.750e-66 Identity = 104/171 (60.82%), Postives = 124/171 (72.51%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P PGRPN GNFD N+WKT N +W+ PVPL INKVQAEGE WPL N ++F T DG FY ++ +G +G+D++ TTL +G F+ E L +TIN E WEYAP LSP G YLF QVY R+DGLGGDDI+VSK+D GNWLPSKNLGPLVNS NE P G + DG +F F
Sbjct: 119 PIPGRPNLGNFDTNVWKTTLVNGSWTTPVPLDSTINKVQAEGETWPLQNENHFNTADGETFYLCTMRRGEEGLDLYHTTLKNGSFSEPEKLPATINGEDSWEYAPKLSPAGMYLFFQVYGREDGLGGDDIFVSKKDTEGNWLPSKNLGPLVNSAGNETPFGMTSDGKFFFF 289
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A2E0YMV7_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E0YMV7_9FLAO) HSP 1 Score: 203 bits (517), Expect = 5.600e-60 Identity = 95/171 (55.56%), Postives = 118/171 (69.01%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P GRPN GNFD N+W +NE WS P PL P IN VQAEGE+WP+ N ++F+TVDG FY + G G+D++ TT T FT + L +TINTEK+WEYAP LSPDGNYLF Q Y R D GGDDIYVSK+ +G W + LGP++N+ QNECP G + DG++F F
Sbjct: 119 PIEGRPNLGNFDTNVWMNTKSNEGWSTPTPLSPTINYVQAEGEQWPVSNENHFHTVDGETFYLCTQRPGTAGIDLYQTTKTTSGFTEPQKLPATINTEKYWEYAPKLSPDGNYLFFQSYGRPDTQGGDDIYVSKRGVDGQWQQALPLGPMINTGQNECPTGITWDGNFFFF 289
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A1I6HCC8_9FLAO (WD40-like Beta Propeller Repeat n=1 Tax=Robiginitalea myxolifaciens TaxID=400055 RepID=A0A1I6HCC8_9FLAO) HSP 1 Score: 164 bits (416), Expect = 4.070e-45 Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P PG+PN+GNFDMNIW E W P PLP IN+VQ GE+WP N ++F++ D FY ++ +G++ + ++ TTL DG ++ E ++ + EKFW Y+ ++SPDG YL Y G GG+DI+VSK+ E G W +K +GPLVN+ E FS DG YF F
Sbjct: 105 PLPGKPNQGNFDMNIWVMEQTASGWGTPEPLPEPINQVQVSGEQWPSSNNNFFFSNDNETFYFTTMNRGSESIKLYQTTLKDGAYSEPEVITGLFDDEKFWVYSAVISPDGQYLVFNSYGAPGGAGGEDIFVSKRTETG-WSKAKPIGPLVNTTNEESSPRFSRDGKYFFF 274
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: UPI0016558669 (PD40 domain-containing protein n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI0016558669) HSP 1 Score: 164 bits (415), Expect = 8.200e-45 Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 3
Query: 348 PGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P +KGNFDMNIW TE N++WSE P+ INKVQ EGE+WP N S YT DG FY ++++ +KG+ I+TTTL +G+F+ + + + EK+W P LSPDGNYL Y G+GG+D+Y SK+ ENG W + +LG ++N++ E A FS DG F F
Sbjct: 122 PTEESKGNFDMNIWVTEKENDSWSEAKPVDSVINKVQIEGEKWPSSNESSLYTQDGKTFYYSTMMRNSKGIGIYTTTLENGKFSTPKRIEGLLEDEKYWISGPTLSPDGNYLLFNAYGVKGGVGGEDLYASKKTENG-WSKAVSLGNIINTKHEEGAAKFSRDGHCFFF 289
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A411E8Z1_9FLAO (Uncharacterized protein n=1 Tax=Muriicola soli TaxID=2507538 RepID=A0A411E8Z1_9FLAO) HSP 1 Score: 163 bits (412), Expect = 2.110e-44 Identity = 72/171 (42.11%), Postives = 104/171 (60.82%), Query Frame = 3
Query: 348 PGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLFLH 860
PG+PN G FDMN+W+ + WS+P PLP IN+VQ EGE WP N ++F+T DG + Y ++ +G+K +DI+TT + F+ L + W+Y+ +SPDGNYL Y G+GG+D+YVSK+ G W +KN+G L+N+ + FSPDG YF + H
Sbjct: 119 PGKPNLGGFDMNVWQMNKTEDGWSDPEPLPEPINQVQLEGENWPSSNNNFFFTRDGIKHYFTTMERGSKAIDIYTTEKSGSSFSTPGRLEGLFENDSLWKYSASVSPDGNYLVFNSYGAPQGIGGEDLYVSKKTATG-WSSAKNMGDLINTPGEDSSGRFSPDGKYFFYTH 288
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: A0A0S1S7B5_9FLAO (Uncharacterized protein n=2 Tax=Sediminicola sp. YIK13 TaxID=1453352 RepID=A0A0S1S7B5_9FLAO) HSP 1 Score: 162 bits (410), Expect = 3.070e-44 Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P P +PNKGNFDMNIW E ++ WSEP PLP IN VQ E EEWP N ++F T D FY ++++G K + ++ T +F+ + ++ + EKFW Y+ ++SPDG YL Y G GG+DI++SK+ +NG W +K +GP VNS+ E FS DG YF F
Sbjct: 105 PIPNKPNKGNFDMNIWMMEKTDKGWSEPKPLPEPINAVQIENEEWPSSNNNFFXTNDNQTFYFTTMMRGTKSIKLYETKFDGKDFSEPKAINGIFDDEKFWIYSAVISPDGKYLVFNSYGAPGGTGGEDIFISKKTDNG-WGKAKPIGPKVNSKDEESSPRFSRDGKYFFF 274
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: UPI001108768D (PD40 domain-containing protein n=1 Tax=Winogradskyella algicola TaxID=2575815 RepID=UPI001108768D) HSP 1 Score: 156 bits (394), Expect = 1.040e-41 Identity = 76/171 (44.44%), Postives = 101/171 (59.06%), Query Frame = 3
Query: 342 PHPGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P P +PNKGNFDMNIWK E WSEPVPLP IN+VQ EGEEWP N FY ++V+G K + ++ T L G F+ + + + E + Y+ ++SPDGN+L Y G GG+DI+VSK+ +NG W +K +GPL N++ E FS DG YF F
Sbjct: 120 PIPDKPNKGNFDMNIWKMERTETGWSEPVPLPTPINEVQEEGEEWPSSNXXXXXXXXXXTFYYTTMVRGTKSIKLYETKLEGGNFSAPKVIDGLFDDENYVVYSAVISPDGNFLVFNSYGVPSGSGGEDIFVSKKTQNG-WSRAKPIGPLANTKGEESSPRFSRDGKYFFF 289
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Match: UPI001F45E2CC (hypothetical protein n=1 Tax=Portibacter lacus TaxID=1099794 RepID=UPI001F45E2CC) HSP 1 Score: 155 bits (391), Expect = 2.670e-41 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 3
Query: 348 PGRPNKGNFDMNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYTGSLVKGAKGMDIFTTTLTDGEFTPLEPLSSTINTEKFWEYAPILSPDGNYLFTQVYKRDDGLGGDDIYVSKQDENGNWLPSKNLGPLVNSQQNECPAGFSPDGSYFLF 854
P +PNKGNFDMNIW E + WSEP+PLP IN VQ E EEWP N ++ +T + FY S+ +G K + ++ T F+ + + EK+W Y+ ++SPDG YL + +G GG+DI+VSK+ ENG W +K++G LVN++ E FS DG YF F
Sbjct: 121 PNKPNKGNFDMNIWMMEKIDNGWSEPIPLPEPINYVQIENEEWPSSNNNFLFTNNNKDFYFTSMKRGTKSIKLYETKFDGKGFSEPKEIKGIWEDEKYWVYSAVISPDGKYLVFNSFGAPNGTGGEDIFVSKKTENG-WSKAKSIGQLVNTKDEESSPRFSRDGKYFFF 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1470.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1470.7.1 >prot_P-littoralis_Contig1470.7.1 ID=prot_P-littoralis_Contig1470.7.1|Name=mRNA_P-littoralis_Contig1470.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=179bp MNIWKTEWNNETWSEPVPLPPHINKVQAEGEEWPLHNLSYFYTVDGFQFYback to top mRNA from alignment at P-littoralis_Contig1470:12032..12980- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1470.7.1 ID=mRNA_P-littoralis_Contig1470.7.1|Name=mRNA_P-littoralis_Contig1470.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=949bp|location=Sequence derived from alignment at P-littoralis_Contig1470:12032..12980- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1470:12032..12980- >mRNA_P-littoralis_Contig1470.7.1 ID=mRNA_P-littoralis_Contig1470.7.1|Name=mRNA_P-littoralis_Contig1470.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=537bp|location=Sequence derived from alignment at P-littoralis_Contig1470:12032..12980- (Pylaiella littoralis U1_48)back to top |