prot_P-littoralis_Contig1470.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1470.4.1
Unique Nameprot_P-littoralis_Contig1470.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length206
Homology
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A2D8LJR4_9FLAO (DEAD/DEAH box helicase n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LJR4_9FLAO)

HSP 1 Score: 380 bits (975), Expect = 3.750e-129
Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDFLPWRRK 203
            MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRA+QLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF    +K
Sbjct:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAMQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDFFTMAQK 203          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A848ZMV2_9FLAO (DEAD/DEAH box helicase n=1 Tax=Arenibacter sp. TaxID=1872633 RepID=A0A848ZMV2_9FLAO)

HSP 1 Score: 326 bits (835), Expect = 5.340e-108
Identity = 165/197 (83.76%), Postives = 182/197 (92.39%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            MQSFD+FKIS QL+Y I DLG+T PTPIQ++AFPVIASGKDVVGIAQTGTGKTF YMLPILQ LPFSK+K+PRVLILVPTRELV+QVV EI+KFSKYL NRV+GVYGGTNIN QKA L EGQDIVV TPGRLYDLVLSRA++L SIKKLVIDEVDVMLDLGFRFQLTNIFDLLP+ RQNIMFSATMT+DI+A+I+ F
Sbjct:    1 MQSFDEFKISNQLRYAIDDLGYTSPTPIQSKAFPVIASGKDVVGIAQTGTGKTFGYMLPILQMLPFSKEKHPRVLILVPTRELVLQVVEEIKKFSKYLNNRVVGVYGGTNINTQKALLEEGQDIVVGTPGRLYDLVLSRALRLNSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPKSRQNIMFSATMTEDIDAIISQF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: I3CAB4_9FLAO (DNA/RNA helicase, superfamily II n=2 Tax=Joostella TaxID=453850 RepID=I3CAB4_9FLAO)

HSP 1 Score: 318 bits (815), Expect = 8.390e-105
Identity = 160/197 (81.22%), Postives = 176/197 (89.34%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            MQSFD+FKIS QLQY I DLGF  PTPIQ +AFPV+ SGKDV+GIAQTGTGKTFAYMLPILQGL FSKQ NPRVL++VPTRELVVQVV EI KFSKY+  RV GVYGGTNIN QK ALA+G DI+VATPGRLYDLV+SRA+QLK++KKLVIDEVDVMLDLGFRFQL NIF+LLP +RQNIMFSATMTD+IE LI DF
Sbjct:    9 MQSFDEFKISNQLQYAIEDLGFENPTPIQEKAFPVVMSGKDVIGIAQTGTGKTFAYMLPILQGLKFSKQVNPRVLVMVPTRELVVQVVEEIAKFSKYMNIRVEGVYGGTNINRQKEALAQGTDIIVATPGRLYDLVISRAVQLKAVKKLVIDEVDVMLDLGFRFQLNNIFELLPERRQNIMFSATMTDEIETLIQDF 205          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A2N0EVM4_9FLAO (ATP-dependent RNA helicase RhlE n=1 Tax=Ulvibacter sp. MAR_2010_11 TaxID=1250229 RepID=A0A2N0EVM4_9FLAO)

HSP 1 Score: 318 bits (814), Expect = 8.520e-105
Identity = 164/197 (83.25%), Postives = 177/197 (89.85%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            MQSFDDFKIS QLQY ITDLGF +PTPIQ++AF +I SGKDVVGIAQTGTGKTFAYMLPILQ LPF+KQ  PRVL+LVPTRELVVQVV EIEKF KY   +VLGVYGGTNIN QK ALA G DIVVATPGRLYDLVL RA+QLK+IKKLVIDEVDVMLDLGFRFQLTNIF+LLP +RQNIMFSATMT++IE LINDF
Sbjct:    1 MQSFDDFKISKQLQYAITDLGFEKPTPIQSEAFSIIVSGKDVVGIAQTGTGKTFAYMLPILQMLPFAKQIQPRVLVLVPTRELVVQVVEEIEKFGKYSDIKVLGVYGGTNINRQKEALALGADIVVATPGRLYDLVLCRALQLKAIKKLVIDEVDVMLDLGFRFQLTNIFELLPERRQNIMFSATMTEEIETLINDF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A5B7U002_9FLAO (DEAD/DEAH box helicase n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A5B7U002_9FLAO)

HSP 1 Score: 315 bits (808), Expect = 6.880e-104
Identity = 159/197 (80.71%), Postives = 177/197 (89.85%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            M++FDDFKIS QL Y I DLGFT PTPIQ++AFPVIASGK+V+GIAQTGTGKT AYMLPILQ L FS++K+PRVL+LVPTRELVVQVV EI KF KYL NRV+G+YGGTNIN QKA L +G DI+VATPGRLYDLVLSRA+QLKSIKKLVIDEVDVMLDLGFRFQLTN+FDLLP  RQNIMFSATMTDD++ LI DF
Sbjct:    1 METFDDFKISKQLGYAIDDLGFTTPTPIQSEAFPVIASGKNVIGIAQTGTGKTLAYMLPILQQLKFSEEKHPRVLVLVPTRELVVQVVEEINKFGKYLNNRVIGLYGGTNINTQKAMLDQGYDIIVATPGRLYDLVLSRALQLKSIKKLVIDEVDVMLDLGFRFQLTNLFDLLPVNRQNIMFSATMTDDVDQLITDF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: K2NYP9_9FLAO (DNA/RNA helicase n=1 Tax=Galbibacter marinus TaxID=555500 RepID=K2NYP9_9FLAO)

HSP 1 Score: 311 bits (798), Expect = 2.440e-102
Identity = 158/197 (80.20%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            M SFD+F IS QL+Y I DLGF  PTPIQ ++FPV+ SG D++GIAQTGTGKTFAYMLPILQ L FSKQ NPRVL++VPTRELVVQVV EIEKFSKYL  RV GVYGGTNIN QK ALA+G DIVVATPGRLYDLV+SRA+QLK+IKKLVIDEVDVMLDLGFRFQL NIF+LLP +RQNIMFSATMTD+IE LINDF
Sbjct:    1 MASFDEFNISNQLRYAIEDLGFENPTPIQEKSFPVVMSGTDIIGIAQTGTGKTFAYMLPILQQLKFSKQVNPRVLVMVPTRELVVQVVDEIEKFSKYLNIRVAGVYGGTNINRQKEALAQGTDIVVATPGRLYDLVISRALQLKAIKKLVIDEVDVMLDLGFRFQLNNIFELLPERRQNIMFSATMTDEIETLINDF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A846QTX6_9FLAO (ATP-dependent RNA helicase RhlE n=1 Tax=Saonia flava TaxID=523696 RepID=A0A846QTX6_9FLAO)

HSP 1 Score: 310 bits (795), Expect = 6.340e-102
Identity = 159/203 (78.33%), Postives = 179/203 (88.18%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDFLPWRRK 203
            MQSF+DFKI+ QL+  ITDLGF +PTPIQ QAF VI SGKD+VGIAQTGTGKTFAYMLPILQ LPFSK+ +PRVL++VPTRELVVQVV EIEKF KY + RV GVYGGTN+N QK ALA+G DIVVATPGRLYDLVL +A+QLKS+KK+VIDEVDVMLDLGFRFQLTNIFDLLP +RQNIMFSATMTD+IE LI+DF    +K
Sbjct:    1 MQSFEDFKINNQLRNAITDLGFEKPTPIQEQAFSVIMSGKDMVGIAQTGTGKTFAYMLPILQMLPFSKELHPRVLVVVPTRELVVQVVEEIEKFGKYSSVRVTGVYGGTNMNRQKEALAQGADIVVATPGRLYDLVLCKALQLKSVKKMVIDEVDVMLDLGFRFQLTNIFDLLPERRQNIMFSATMTDEIEVLIHDFFRGTQK 203          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: UPI0015BE9D24 (DEAD/DEAH box helicase n=2 Tax=Galbibacter TaxID=379068 RepID=UPI0015BE9D24)

HSP 1 Score: 309 bits (791), Expect = 2.790e-101
Identity = 158/197 (80.20%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            M SF+DFKIS QL Y I DLGF +PTPIQ +AFPV+ SGKDV+GIAQTGTGKTFAYMLPILQ L FSKQ NPRVL++VPTRELVVQVV EI+KFSKYL  RV GV+GGTNIN QK ALA+G DIVVATPGRLYDLV+SRA+ LKS+KKLVIDEVDVMLDLGFRFQL NIF+LLP +RQNIMFSATMT+DIE LI DF
Sbjct:    1 MSSFEDFKISKQLGYAIEDLGFEKPTPIQEKAFPVVMSGKDVIGIAQTGTGKTFAYMLPILQQLKFSKQVNPRVLVMVPTRELVVQVVEEIQKFSKYLNVRVEGVFGGTNINRQKEALAQGTDIVVATPGRLYDLVISRAVSLKSVKKLVIDEVDVMLDLGFRFQLNNIFELLPERRQNIMFSATMTEDIEMLILDF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: F0RBI0_CELLC (DEAD/DEAH box helicase domain protein n=8 Tax=Cellulophaga TaxID=104264 RepID=F0RBI0_CELLC)

HSP 1 Score: 308 bits (790), Expect = 3.610e-101
Identity = 152/197 (77.16%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            M+SF DF +  QL Y I DLGFT PTPIQ +AFPV+ SGKD++GIAQTGTGKTFAYMLPILQ L FSKQKNPRVLILVPTRELV+QVV +I  F+KY+  RV+GVYGGTN+N Q  A+++G DI+VATPGRLYDLVL+RA+QLKSIKKLVIDEVDVMLDLGFRFQ+TNIF+LLP +RQNIMFSATMTDD+E LINDF
Sbjct:    1 MESFSDFNLKKQLHYAIDDLGFTTPTPIQKEAFPVVMSGKDMIGIAQTGTGKTFAYMLPILQDLAFSKQKNPRVLILVPTRELVLQVVEQINSFAKYINVRVMGVYGGTNMNTQAQAVSQGSDIIVATPGRLYDLVLARALQLKSIKKLVIDEVDVMLDLGFRFQITNIFELLPTRRQNIMFSATMTDDVETLINDF 197          
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Match: A0A6L9EZ24_9FLAO (DEAD/DEAH box helicase n=1 Tax=Flavobacteriaceae bacterium R38 TaxID=2697054 RepID=A0A6L9EZ24_9FLAO)

HSP 1 Score: 308 bits (790), Expect = 3.610e-101
Identity = 156/197 (79.19%), Postives = 173/197 (87.82%), Query Frame = 0
Query:    1 MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGTGKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTNRVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLVIDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDF 197
            M SF DF IS QLQY I DLGF +PTPIQ+QAF VI SGKD+VGIAQTGTGKT AYMLPILQ L FSKQ NPRVL++VPTRELV+QVV EIEKFSKY +NR++GVYGG NIN QK AL EG DI+VATPGRLYDLV+SRA+QLKSIKKLVIDEVDVMLDLGFRFQLTNIF+LLP +RQNIMFSATMT+ + A+I DF
Sbjct:    1 MDSFKDFTISKQLQYAIDDLGFEKPTPIQSQAFSVILSGKDMVGIAQTGTGKTLAYMLPILQELKFSKQANPRVLVMVPTRELVLQVVEEIEKFSKYKSNRIIGVYGGVNINTQKQALTEGSDIIVATPGRLYDLVISRALQLKSIKKLVIDEVDVMLDLGFRFQLTNIFELLPERRQNIMFSATMTEHVNAIIQDF 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1470.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LJR4_9FLAO3.750e-12997.04DEAD/DEAH box helicase n=2 Tax=Flavobacteriaceae b... [more]
A0A848ZMV2_9FLAO5.340e-10883.76DEAD/DEAH box helicase n=1 Tax=Arenibacter sp. Tax... [more]
I3CAB4_9FLAO8.390e-10581.22DNA/RNA helicase, superfamily II n=2 Tax=Joostella... [more]
A0A2N0EVM4_9FLAO8.520e-10583.25ATP-dependent RNA helicase RhlE n=1 Tax=Ulvibacter... [more]
A0A5B7U002_9FLAO6.880e-10480.71DEAD/DEAH box helicase n=3 Tax=Flavobacteriaceae T... [more]
K2NYP9_9FLAO2.440e-10280.20DNA/RNA helicase n=1 Tax=Galbibacter marinus TaxID... [more]
A0A846QTX6_9FLAO6.340e-10278.33ATP-dependent RNA helicase RhlE n=1 Tax=Saonia fla... [more]
UPI0015BE9D242.790e-10180.20DEAD/DEAH box helicase n=2 Tax=Galbibacter TaxID=3... [more]
F0RBI0_CELLC3.610e-10177.16DEAD/DEAH box helicase domain protein n=8 Tax=Cell... [more]
A0A6L9EZ24_9FLAO3.610e-10179.19DEAD/DEAH box helicase n=1 Tax=Flavobacteriaceae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 21..204
e-value: 1.3E-48
score: 177.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 33..204
score: 30.345831
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..203
e-value: 1.9E-72
score: 245.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..198
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 26..192
e-value: 1.5E-48
score: 164.9
NoneNo IPR availablePANTHERPTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDcoord: 1..198
NoneNo IPR availablePANTHERPTHR47959:SF1ATP-DEPENDENT RNA HELICASE RHLEcoord: 1..198
NoneNo IPR availableCDDcd00268DEADccoord: 16..198
e-value: 3.65614E-89
score: 258.526
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 2..30
score: 11.072705

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1470contigP-littoralis_Contig1470:6227..6844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1470.4.1mRNA_P-littoralis_Contig1470.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1470 6227..7570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1470.4.1 ID=prot_P-littoralis_Contig1470.4.1|Name=mRNA_P-littoralis_Contig1470.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MQSFDDFKISTQLQYGITDLGFTQPTPIQAQAFPVIASGKDVVGIAQTGT
GKTFAYMLPILQGLPFSKQKNPRVLILVPTRELVVQVVAEIEKFSKYLTN
RVLGVYGGTNINNQKAALAEGQDIVVATPGRLYDLVLSRAIQLKSIKKLV
IDEVDVMLDLGFRFQLTNIFDLLPRQRQNIMFSATMTDDIEALINDFLPW
RRKFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif