mRNA_P-littoralis_Contig1470.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A2D8LJT1_9FLAO (Helicase n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LJT1_9FLAO) HSP 1 Score: 463 bits (1191), Expect = 1.020e-161 Identity = 231/235 (98.30%), Postives = 233/235 (99.15%), Query Frame = 1
Query: 1 QNLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
QNLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLP+HKEEFTHRNGRTARMNAHG AYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELG IELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRI+LL
Sbjct: 198 QNLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPIHKEEFTHRNGRTARMNAHGTAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGLIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRISLL 432
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: UPI00046FFC40 (DEAD/DEAH box helicase n=1 Tax=Aquimarina pacifica TaxID=1296415 RepID=UPI00046FFC40) HSP 1 Score: 372 bits (956), Expect = 5.660e-126 Identity = 181/234 (77.35%), Postives = 207/234 (88.46%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
NL+VKKVL+ +KNKL TL+ LL HIGN+PGIIFCNFKDTIQ+VSD+L EN I+HGCF+GGMEQ+DRERALI+FRNGTHQII++TDLAARGLDIPEL +IIH+QLP+ EEFTHRNGRTARMNA G AYVLQWT+EY+PEFI T EIV L K+ ++ W TLF+SGGRKDKISKGDIAGLFFKQGGL K+ELG IELKQDCAFVAVPK KA +I KTNNTRLKKKKVRIT++
Sbjct: 203 NLEVKKVLSQDKNKLQTLLDLLYHIGNKPGIIFCNFKDTIQFVSDFLKENEIAHGCFHGGMEQRDRERALIKFRNGTHQIIVSTDLAARGLDIPELNYIIHFQLPLKAEEFTHRNGRTARMNAQGTAYVLQWTDEYLPEFIETSEIVTLQSKSTQITPEWATLFISGGRKDKISKGDIAGLFFKQGGLEKHELGIIELKQDCAFVAVPKEKASFLIKKTNNTRLKKKKVRITVI 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A420ZLA9_9FLAO (Superfamily II DNA/RNA helicase n=2 Tax=Lacinutrix venerupis TaxID=1486034 RepID=A0A420ZLA9_9FLAO) HSP 1 Score: 369 bits (946), Expect = 1.860e-124 Identity = 181/234 (77.35%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
NL +KKV++ +KNKL TLV LL HIGN+PGIIFCNFKDTIQYVSD+L +NNI HG FYGG+EQ DRERALI+FRNGTHQIIIATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRTARMN HG AYVLQW EY+PEFITT EI + K ++ +NW TLF+SGGRKDKISKGDIAGLFFKQG L +NELG IELKQDCAFVAV K+K VI KTNNTRLKKKKVR+TL+
Sbjct: 203 NLVIKKVISPDKNKLQTLVNLLHHIGNKPGIIFCNFKDTIQYVSDFLEDNNIPHGTFYGGLEQIDRERALIKFRNGTHQIIIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTARMNTHGTAYVLQWENEYLPEFITTSEIEKIEEKQNKINSNWATLFISGGRKDKISKGDIAGLFFKQGDLQRNELGVIELKQDCAFVAVTKTKVLDVINKTNNTRLKKKKVRVTLI 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A6G6GIR9_9FLAO (DEAD/DEAH box helicase n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GIR9_9FLAO) HSP 1 Score: 367 bits (943), Expect = 5.470e-124 Identity = 181/233 (77.68%), Postives = 202/233 (86.70%), Query Frame = 1
Query: 7 LKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
L +KKV++ EK+KL TLV LL HIGN+PGIIFCNFKDTIQ+VSDYL +NNI HG FYGG+EQ +RERALI+FRNGTHQIIIATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRTARMNA G AYVLQW +EYVPEFITT+EIV L K RL++ W TL+VSGGR+DKISKGD+AGLFFKQG L ++ELG IELKQDCAFVAVP SK VI KTNNTRLKKKKVR+T L
Sbjct: 204 LTIKKVVSEEKDKLKTLVRLLHHIGNQPGIIFCNFKDTIQFVSDYLEDNNIPHGLFYGGLEQIERERALIKFRNGTHQIIIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTARMNAQGTAYVLQWEQEYVPEFITTREIVTLQDKKTRLQSKWATLYVSGGRRDKISKGDLAGLFFKQGNLERDELGVIELKQDCAFVAVPISKVKAVIEKTNNTRLKKKKVRVTQL 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: F6GIB9_LACS5 (DEAD/DEAH box helicase domain protein n=2 Tax=unclassified Lacinutrix TaxID=2647285 RepID=F6GIB9_LACS5) HSP 1 Score: 366 bits (939), Expect = 2.360e-123 Identity = 178/234 (76.07%), Postives = 204/234 (87.18%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
NL++KKV++ +KNKL TLV L+ IGN+PGIIFCNFKDTIQ+VSD+L +NNI HG FYGG+EQ +RERALI+FRNGTHQIIIATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRTARMNA G AYVLQW EY+PEFITT +I L K+ + +NW+TLF+SGGRKDKISKGDIAGLFFKQG L +NELG IELKQDCAFVAVPKSK + +IT TNNTRLKKKKVR+TL+
Sbjct: 206 NLEIKKVISPDKNKLQTLVDLIHQIGNKPGIIFCNFKDTIQFVSDFLEDNNIPHGTFYGGLEQIERERALIKFRNGTHQIIIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTARMNAKGTAYVLQWENEYLPEFITTSQIEKLNGKHSNINSNWSTLFISGGRKDKISKGDIAGLFFKQGNLERNELGVIELKQDCAFVAVPKSKVNSIITSTNNTRLKKKKVRVTLI 439
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A2K8XEN8_9FLAO (Helicase n=4 Tax=Lacinutrix TaxID=291183 RepID=A0A2K8XEN8_9FLAO) HSP 1 Score: 364 bits (935), Expect = 8.640e-123 Identity = 175/234 (74.79%), Postives = 203/234 (86.75%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
NL VKKV++ +KNKL TLV LL HIGN+PGIIFCNFKDTIQYVSD+L NNI+HGCF+GGMEQ DRERALI+FRNG+HQIIIATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRT RMNA G AYVLQW EY+P+FIT+ EI L+ K ++E+ W+TLF+SGGRKDKISKGDIAGLFFKQG L +NELG IELKQDCAFVAVPK+KA ++ K NN R+KK+KVR+T++
Sbjct: 203 NLVVKKVISPDKNKLQTLVDLLHHIGNKPGIIFCNFKDTIQYVSDFLNTNNIAHGCFFGGMEQIDRERALIKFRNGSHQIIIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTGRMNAQGTAYVLQWENEYLPDFITSSEITKLSSKPTKIESEWSTLFISGGRKDKISKGDIAGLFFKQGNLERNELGVIELKQDCAFVAVPKAKALAIVEKVNNMRIKKRKVRVTIV 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A167GXE0_9FLAO (Helicase n=1 Tax=Cochleicola gelatinilyticus TaxID=1763537 RepID=A0A167GXE0_9FLAO) HSP 1 Score: 363 bits (933), Expect = 1.740e-122 Identity = 177/234 (75.64%), Postives = 200/234 (85.47%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
+L +KKV+ASEK+KL TLV LL+HIGNEPGIIFCNFK+TI +VS LTEN I HGCFYGG+EQ DRERALI+FRNGTHQ++IATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRTARMNA G AYVLQW EE P+FITT E++ L K +++ W TLFVSGGRKDKISKGD+AGLFFKQG L +NELG IELKQDCAFVAVPKSK +I TNNTRLKKKKVR++LL
Sbjct: 203 HLAIKKVIASEKDKLKTLVALLKHIGNEPGIIFCNFKNTIDFVSTNLTENEIPHGCFYGGLEQIDRERALIKFRNGTHQVLIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTARMNAKGTAYVLQWEEETTPDFITTSEVITLQDKQTTIQSKWATLFVSGGRKDKISKGDLAGLFFKQGNLERNELGVIELKQDCAFVAVPKSKVESIIKLTNNTRLKKKKVRVSLL 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A1Z7ZPX2_9FLAO (Helicase n=1 Tax=Flavobacteriales bacterium 33_180_T64 TaxID=1856290 RepID=A0A1Z7ZPX2_9FLAO) HSP 1 Score: 363 bits (933), Expect = 1.740e-122 Identity = 178/232 (76.72%), Postives = 201/232 (86.64%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRIT 699
NL++KKV++ +KNKL TLV LLQHIG++PGIIFCNFKDTI YVS +L ENNI+HGCFYGGMEQ DRERALI+FRNGTHQIIIATDLAARGLDIPEL +IIHYQLP+ EEFTHRNGRTARMN G AYVLQW EY+PEFI + +I L ++ L++ WTTLF+SGGRKDKISKGDIAGLFFKQ GL K+ELG IELKQDCAFVAVPK+K +I KTNNTRLKKKKVRIT
Sbjct: 203 NLEIKKVISPDKNKLQTLVDLLQHIGHKPGIIFCNFKDTISYVSAFLDENNIAHGCFYGGMEQIDRERALIKFRNGTHQIIIATDLAARGLDIPELNYIIHYQLPLKAEEFTHRNGRTARMNTQGTAYVLQWKNEYLPEFIVSNQIQKLTATSLGLKSQWTTLFISGGRKDKISKGDIAGLFFKQSGLEKHELGIIELKQDCAFVAVPKAKVMSIIAKTNNTRLKKKKVRIT 434
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A2E2W9R6_9FLAO (Helicase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2W9R6_9FLAO) HSP 1 Score: 362 bits (929), Expect = 7.010e-122 Identity = 181/234 (77.35%), Postives = 199/234 (85.04%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
NL++KKVLA +K+KL TLV LL HIGN+PGIIFCNFKDTIQ+VSDYL ++NI HG FYGG+EQ +RERALI+FRNGTHQIIIATDLAARGLDIPEL FIIHYQLP+ EEFTHRNGRTARMNA G AYVLQW +E PEFITT EIV L K + + W TLFVSGGRKDKISKGD+AGLFFKQG L +ELG IELKQDCAFVAVPK KA VI KTNN RLKKKKVR+TLL
Sbjct: 203 NLQIKKVLAPQKDKLQTLVALLYHIGNQPGIIFCNFKDTIQFVSDYLEDHNIPHGVFYGGLEQLERERALIKFRNGTHQIIIATDLAARGLDIPELNFIIHYQLPLKAEEFTHRNGRTARMNAQGTAYVLQWEQEPTPEFITTTEIVKLEDKQTAIRSQWATLFVSGGRKDKISKGDLAGLFFKQGKLKGDELGVIELKQDCAFVAVPKEKAKAVIEKTNNMRLKKKKVRVTLL 436
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Match: A0A5D0QWJ2_9FLAO (DEAD/DEAH box helicase n=1 Tax=Bizionia algoritergicola TaxID=291187 RepID=A0A5D0QWJ2_9FLAO) HSP 1 Score: 358 bits (919), Expect = 2.300e-120 Identity = 176/234 (75.21%), Postives = 201/234 (85.90%), Query Frame = 1
Query: 4 NLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTENNISHGCFYGGMEQKDRERALIQFRNGTHQIIIATDLAARGLDIPELTFIIHYQLPMHKEEFTHRNGRTARMNAHGMAYVLQWTEEYVPEFITTKEIVALAPKNVRLETNWTTLFVSGGRKDKISKGDIAGLFFKQGGLNKNELGHIELKQDCAFVAVPKSKAHGVITKTNNTRLKKKKVRITLL 705
N+++KKV++ +K+K NTL+ LL IGN+PGIIFCN+KDTIQYVSD+L NI+HGCFYGG+EQ DRERALI+FRNGTHQIIIATDLAARGLDIPEL +IIHYQLP+ EEFTHRNGRTARMNA G AYVLQW +EY+PEFI T IV L +LE+ W TLFVSGGRKDKISKGDIAGL FKQG L K+ELG IELKQDCAFVAVPK KA+ V+ KTNN+RLKKKKVRIT+L
Sbjct: 203 NIQIKKVISPQKDKRNTLLDLLYDIGNKPGIIFCNYKDTIQYVSDFLNSQNIAHGCFYGGLEQIDRERALIKFRNGTHQIIIATDLAARGLDIPELNYIIHYQLPLKAEEFTHRNGRTARMNAEGTAYVLQWEDEYLPEFIDTNHIVKLKGNPKKLESGWVTLFVSGGRKDKISKGDIAGLLFKQGHLEKHELGVIELKQDCAFVAVPKKKANAVVEKTNNSRLKKKKVRITIL 436 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1470.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1470.1.1 >prot_P-littoralis_Contig1470.1.1 ID=prot_P-littoralis_Contig1470.1.1|Name=mRNA_P-littoralis_Contig1470.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=236bp QNLKVKKVLASEKNKLNTLVLLLQHIGNEPGIIFCNFKDTIQYVSDYLTEback to top mRNA from alignment at P-littoralis_Contig1470:3..710+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1470.1.1 ID=mRNA_P-littoralis_Contig1470.1.1|Name=mRNA_P-littoralis_Contig1470.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=708bp|location=Sequence derived from alignment at P-littoralis_Contig1470:3..710+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1470:3..710+ >mRNA_P-littoralis_Contig1470.1.1 ID=mRNA_P-littoralis_Contig1470.1.1|Name=mRNA_P-littoralis_Contig1470.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=708bp|location=Sequence derived from alignment at P-littoralis_Contig1470:3..710+ (Pylaiella littoralis U1_48)back to top |