mRNA_P-littoralis_Contig147.79.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 350 bits (898), Expect = 1.920e-117 Identity = 164/193 (84.97%), Postives = 173/193 (89.64%), Query Frame = 2
Query: 371 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
MSV TAE SFH FCEKFSAALWD WV LPVGDELK+VERVF SGYPGA+ STDCTHFRW GGP SEARMNTGKEGY +VVVE TCDHTGRIIAATKSYPGSENDKT+IQRD+SIWRI+ EEPWS+ KY LYNADGSETE+KGAWLVVDGGYQKIPLLIPPIKHHAT EEH WSRRLESMRKDIECCY +G
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKG 193
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 329 bits (843), Expect = 3.710e-105 Identity = 159/296 (53.72%), Postives = 196/296 (66.22%), Query Frame = 2
Query: 62 RRSYPRPEYMKSVWGQWLTKLKELHASEGGLDEDSREARQFVEAFRIPYEMFRGIVEAMAPAFPTATRDVAGRECIPVELKVCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
R S PRP+Y KS WG L +++ L S L + SREAR F FR+PYE F VE + P FP DV GR C+P+ELKV L+VL GN F DVA FS MS TAE SFH FC F+A LW W+ LP G+ L++VE + GYPGA+GS DCTH W FSE + GKEGY +VV E CDH GRI+A+TK YPG+ENDKTV+QRD S+ R++ EEPW +YKY +Y+ G TEH G WL+ DGGY ++PLLI P K +A E WS+RLES+RKDIEC + +G
Sbjct: 131 RESRPRPDYNKSAWGLRLAQMESLRCSHN-LAQHSREARAFRADFRVPYEFFLEFVEMVRPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKG 425
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 325 bits (833), Expect = 4.120e-105 Identity = 153/296 (51.69%), Postives = 205/296 (69.26%), Query Frame = 2
Query: 62 RRSYPRPEYMKSVWGQWLTKLKELHASEGGLDEDSREARQFVEAFRIPYEMFRGIVEAMAPAFPTATRDVAGRECIPVELKVCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
R + RP+Y S WG L L+ L + G L SREA+ F FR+P+E FR V+ + FPTATRDVAGR+C+P+ELKV L+VL GN F DVA S MS +TAE SFH FC+ FS+ LW +WV LP G+ LKKV +G G PGA+ S DCTH W PFSE + GKEGY ++V E +CDH+GRI+++TK +PG+ENDKTV++RD S+ R++ EEPW++YK+ L++ +G+ TEH G WL+VDGGY ++P LI P K +A+ + WS+R ES+RKDIEC + +G
Sbjct: 33 RETRERPDYSSSAWGVRLANLESLRIA-GRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKG 327
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE) HSP 1 Score: 283 bits (723), Expect = 9.330e-92 Identity = 132/162 (81.48%), Postives = 143/162 (88.27%), Query Frame = 2
Query: 371 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPI 856
MSV TAE SFH FCEKFSAALWD WV LPVGDELK+VERVF SGYPGA+GSTDCTHFRW GGP SEARMNTGKEGY +VVVE TCDHTGRIIAATKSYPGS NDKT+IQRD+SIWRI+ EEPWS+ KY LYNADGSETE+KGAWLVVDGGYQK+ ++ I
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSANDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKVKTVLAVI 162
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 6.430e-91 Identity = 130/155 (83.87%), Postives = 140/155 (90.32%), Query Frame = 2
Query: 371 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKI 835
MSV TAE SFH FCEKFSAALWD WV LPVGDELK+VERVF SGYPGA+GSTDCTHFRW GGP SEARMNTGKEGY +VVVE TCDHTG IIAATKSYPGSENDK++IQRD+SIWRI+ EEPWS+ KY LYNADGSETE+KGAWLVVDGGYQK+
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGHIIAATKSYPGSENDKSIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKM 155
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5JJM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM8_9PHAE) HSP 1 Score: 256 bits (654), Expect = 8.780e-82 Identity = 119/142 (83.80%), Postives = 128/142 (90.14%), Query Frame = 2
Query: 371 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHK 796
MSV TAE SFH FCEKFSAALWD WV LP+GDELK+VERVF SGYPGA+GSTDCTHFRW GGP SEARMNTGKEGY +VVVE TCDHTGRIIAATKSYPGSENDKT+IQRD+SIWRI+ EEPW+T KY LYNADGSETE+K
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPIGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWNTLKYKLYNADGSETEYK 142
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 260 bits (664), Expect = 7.150e-79 Identity = 132/304 (43.42%), Postives = 195/304 (64.14%), Query Frame = 2
Query: 29 EEGEEPKAKQQRRSYPRPEYMKSVWGQWLTKLKELHASEGGLDEDSREARQFVEAFRIPYEMFRGIVEAMAPA--FPTATRDVAGRECIPVELKVCVALKVLAAGNSFQDVATFSGMSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCY 934
E+ E + ++RR Y R +Y KS W Q L +L+E G D +REAR+F FR+PY F +VE + FPT DV GR+ +PVELKV L++L+ GN F D+ S +S +T ++FH FC+ F+A L+D++VYLP G++L+KV + G+PGA+GSTD TH W P+++AR+ TGKEG +V + T DH+GR++A T+ + G+ NDKT+I+ D+++ RI+ + ++ KY LY DG + E KG +L+VD GY K LIPP K + ++S+RLES RKD+EC +
Sbjct: 85 EDDEASREVKRRRVYVRKDYTKSGWWQELMELRET----GETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYF 384
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 255 bits (651), Expect = 2.130e-77 Identity = 120/180 (66.67%), Postives = 135/180 (75.00%), Query Frame = 2
Query: 410 CEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
CEKFS LWD WV LP GDELKKVE ++ GYPGA GSTDCTHFRW G PFSE +TGKEGY S+VVE CDH+GRIIAATK+ PG+ENDKTVI RD+SIWRI+ EEPW +Y + AW++VDGGY KIPLLIPPIK H T EEH WSRRLESMRKDIECC+ +G
Sbjct: 90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKG 256
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE) HSP 1 Score: 246 bits (629), Expect = 5.940e-76 Identity = 120/203 (59.11%), Postives = 141/203 (69.46%), Query Frame = 2
Query: 395 SFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGA--MGSTDCTHFRWSGGPFSEA----------------RMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
SFH FCEKFS LWD WV LP GDE KKVE ++ GYPGA + +T T +TGKEGY S+VVE TCDH+GRIIAATK+YPG+ENDK VI RD+SIWR++ E+PW +YK+ LYNADG+ETE+ GAW++VDGGY KIPLLIPPIK H T EEH WSRRLESMRKDIECC+ +G
Sbjct: 20 SFHHFCEKFSEGLWDTWVKLPGGDEFKKVEEIYRKCGYPGARKVXTTAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKG 222
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 238 bits (608), Expect = 4.260e-73 Identity = 106/193 (54.92%), Postives = 135/193 (69.95%), Query Frame = 2
Query: 371 MSVKTAETSFHLFCEKFSAALWDKWVYLPVGDELKKVERVFGMSGYPGAMGSTDCTHFRWSGGPFSEARMNTGKEGYASVVVETTCDHTGRIIAATKSYPGSENDKTVIQRDRSIWRIQREEPWSTYKYNLYNADGSETEHKGAWLVVDGGYQKIPLLIPPIKHHATNEEHMWSRRLESMRKDIECCYEE*RG 949
MS TAE SFH FC F+A LW W+ LP G++L++VE + GYPGA+GS DCTH W FSE + GKEGY +VV E CDH GRI+A+TK YPG+ENDKTV+QRD S+ R++ EEPW +YKY +Y+ G TEH G WL+ +GGY ++PLLI P K +A E WS+RLES+RKDIEC + +G
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKG 193 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.79.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig147.79.2 >prot_P-littoralis_Contig147.79.2 ID=prot_P-littoralis_Contig147.79.2|Name=mRNA_P-littoralis_Contig147.79.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp MKSVWGQWLTKLKELHASEGGLDEDSREARQFVEAFRIPYEMFRGIVEAMback to top mRNA from alignment at P-littoralis_Contig147:479945..482792- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig147.79.2 ID=mRNA_P-littoralis_Contig147.79.2|Name=mRNA_P-littoralis_Contig147.79.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2848bp|location=Sequence derived from alignment at P-littoralis_Contig147:479945..482792- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig147:479945..482792- >mRNA_P-littoralis_Contig147.79.2 ID=mRNA_P-littoralis_Contig147.79.2|Name=mRNA_P-littoralis_Contig147.79.2|organism=Pylaiella littoralis U1_48|type=CDS|length=855bp|location=Sequence derived from alignment at P-littoralis_Contig147:479945..482792- (Pylaiella littoralis U1_48)back to top |