mRNA_P-littoralis_Contig147.42.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig147.42.1
Unique NamemRNA_P-littoralis_Contig147.42.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: D7G2C3_ECTSI (Putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C3_ECTSI)

HSP 1 Score: 528 bits (1361), Expect = 7.710e-183
Identity = 249/289 (86.16%), Postives = 276/289 (95.50%), Query Frame = 1 
Query:    1 MSDSGS-KTIPMAAGVGLAAAGLLVGLAGPKIVEKIILKMKPGGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHS 864
            MSDSGS KT+ +A G GLA AGL+VGLAGPK+VEKI+LK+KPGGKFSG+NKP+AGARTVKEL+VG HP+QLYSMATPNGQKVTIALEEMG KYDAWYTNIMSGDQFTSGFV+VNPNSKIPALVDN APGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFN+GEAPYFGQFGHFTRYAPVKLDYAV RYSTEVQRALDVLDKQL GKSFLCG+EY+IADMAWLPWVRCLE++YEA++TL+M++Y NV AWR++VE RPATAKGL+INSGA++GA+KEYHS
Sbjct:    1 MSDSGSAKTVSVAVGAGLATAGLVVGLAGPKVVEKILLKLKPGGKFSGMNKPTAGARTVKELEVGTHPLQLYSMATPNGQKVTIALEEMGLKYDAWYTNIMSGDQFTSGFVKVNPNSKIPALVDNDAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNVGEAPYFGQFGHFTRYAPVKLDYAVNRYSTEVQRALDVLDKQLEGKSFLCGEEYSIADMAWLPWVRCLEIFYEAYDTLEMSTYSNVAAWRERVEARPATAKGLIINSGAQNGAFKEYHS 289
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A835ZJ35_9STRA (Putative glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ35_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.860e-116
Identity = 165/266 (62.03%), Postives = 207/266 (77.82%), Query Frame = 1 
Query:   70 VGLAGPKIVEKIILKMKPGGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGA-YKEYHS 864
            +G A P +V      +KPGG F+GLN  +AGART K+L VG H +QLYSMATPNGQKVTIALEEMG +YDAWY  IM  DQFTSGFV VNPNSKIPA+VD   PGGKP++LFE+G+ILLYLAE+SGK LP DPA + ECLNWLFF +G APYFGQ+GHF RYAP+K+ Y + RY+ E +R L VLD++L G++FL G+E TIAD+AW+PWV+CL V+Y+  E L ++ Y+ V+ W++ + +RPA AKG+ INS A +   YKEYHS
Sbjct:   24 LGAATPTLVSAAKQYLKPGGAFAGLNSATAGARTQKDLPVGQHALQLYSMATPNGQKVTIALEEMGLRYDAWYIGIMDQDQFTSGFVAVNPNSKIPAMVDKDGPGGKPVNLFESGSILLYLAEKSGKLLPKDPALRTECLNWLFFQVGAAPYFGQYGHFARYAPIKIKYGIDRYALETKRILSVLDQRLMGRTFLVGEELTIADLAWMPWVQCLSVFYKGDEPLGLSEYQEVMRWKENLLSRPAIAKGMRINSPAEENQQYKEYHS 289
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A7S4JSJ9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JSJ9_9EUKA)

HSP 1 Score: 310 bits (794), Expect = 1.260e-97
Identity = 145/251 (57.77%), Postives = 184/251 (73.31%), Query Frame = 1 
Query:  112 KMKPGGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHS 864
            K K    FS +N+P+AGAR  K+L  G HPIQLYS+ATPNG KVT  L E+G  +DA+  NIM G+QF SGFV++NPNSKIPALVD + P G+ +++FE+GNILLYLAE++G+F+P+DP  + ECLNWLF  +G  PYFGQFGHF +YA  K+ YA+ RY+ E QR L VLD+ L GK +L GDE TIAD AW+PWVRC+E  Y A E + + +YKNV AW  +   RPA A+GL IN+ A D AY  YH+
Sbjct:    5 KKKESSAFSSINRPTAGAREQKDLPAGEHPIQLYSLATPNGIKVTTLLIELGLAFDAYKINIMKGEQFWSGFVDINPNSKIPALVDKNGPNGQSVNVFESGNILLYLAEKTGRFIPSDPVKRVECLNWLFHQMGAGPYFGQFGHFYKYANEKIPYAIDRYTMETQRLLSVLDQALEGKEWLVGDELTIADFAWIPWVRCIETGYNAKEHVGLDNYKNVAAWCDRWLARPAVAEGLKINAWAPD-AYANYHT 254
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: E8Z6K5_PFIPI (Glutathione S-transferase (Fragment) n=1 Tax=Pfiesteria piscicida TaxID=71001 RepID=E8Z6K5_PFIPI)

HSP 1 Score: 304 bits (778), Expect = 1.220e-95
Identity = 147/246 (59.76%), Postives = 181/246 (73.58%), Query Frame = 1 
Query:  142 LNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMG---FKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAER-SGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQL-NGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHS 864
            +NKP+AGAR  +EL VG HPIQLYS+ATPNGQKVTI LEE+G    KYDA+  NIM+GDQFTSGFV VNPNSKIPA++D   PGGK + +FE+GNIL YLAE+   + LP+DPA + E  NWL+F +G  PYFGQFGHF +YA  K+DYA+ RY  E QR LDVLDK+L    ++L G  Y+IAD+AW PWVRC++  Y A+E + +  YKNV AW  K+  RPA  KGL INS + D   +EYHS
Sbjct:    2 INKPTAGAREERELPVGEHPIQLYSLATPNGQKVTILLEEIGEEKVKYDAYLINIMAGDQFTSGFVAVNPNSKIPAMIDRDGPGGKTVRVFESGNILQYLAEKYQSELLPSDPAERLEVFNWLYFQVGAGPYFGQFGHFYKYANEKIDYAINRYKMETQRLLDVLDKRLAETGAYLAGPNYSIADIAWFPWVRCIDTGYSAWEEIGVDEYKNVRAWFDKISARPAVEKGLRINSSS-DNGIREYHS 246
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A2R5GYV1_9STRA (Glutathione S-transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GYV1_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.040e-94
Identity = 143/243 (58.85%), Postives = 177/243 (72.84%), Query Frame = 1 
Query:  136 SGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHS 864
            SG N+ ++G R  + L VG HP+QLYS  TPNGQKVT+ALEEMG  YDA + +I  GDQFTSGFVE+NPNSKIPALVD   P GK + +FET +ILLYLAE+SGK +P DPA K E +NW+ +  G APYFGQFGHFT+YA VKL Y + RYS E QR LDVLDKQL GK ++ G EYT+AD+  +PW+ CL  +Y A ETL++ SYKNV  W  ++++RPA   G+ IN G  D  Y+ Y S
Sbjct:   51 SGSNRATSGVREQRSLPVGKHPLQLYSAGTPNGQKVTVALEEMGLAYDAHFISI-GGDQFTSGFVEINPNSKIPALVDREGPNGKEIRVFETASILLYLAEKSGKLVPKDPAQKVEMMNWIMWLQGSAPYFGQFGHFTKYAKVKLGYPIERYSMEAQRLLDVLDKQLEGKDYILGSEYTLADINTMPWINCLSQFYNADETLELDSYKNVQKWMARIKSRPAVKLGMQIN-GFGDSKYRNYSS 291
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BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A7S3PBB9_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3PBB9_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.430e-90
Identity = 142/259 (54.83%), Postives = 184/259 (71.04%), Query Frame = 1 
Query:   91 IVEKIILKMKPGGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQ-FGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHS 864
            +V K+ ++ K  GK+  +NKP+AGAR   +L  G HP+QL+S+ TPNGQKVTI LEE+G +YDAW  NI  G+QF+SGFVE NPNSKIPAL+D S     P+ +FETG+ILLYLAE+  KF+P D  AKAEC+NWLF+NIG AP+ G  FGHF  YAPV ++YA+ R+S E +R LDVLDK L   +++ G+EYTIADMA  PWV+CL+  Y A E L    Y+NV+ W + +E RPA  +GL +N G  +    E HS
Sbjct:   36 VVPKVWVEPKIEGKWGAINKPTAGARFEAKLPRGDHPLQLHSLGTPNGQKVTIMLEELGVEYDAWKVNIGKGEQFSSGFVEANPNSKIPALLDYSENSAVPVRVFETGSILLYLAEKYDKFVPKDSRAKAECMNWLFWNIGTAPFIGGGFGHFYHYAPVNIEYAINRFSMETKRILDVLDKHLAVNAYMAGEEYTIADMAIFPWVKCLDWGYNAAEFLQFNEYENVIRWIENIEERPAVKRGLKVN-GWGENDLPERHS 293
[Close]
BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A448ZIJ3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIJ3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.010e-86
Identity = 139/255 (54.51%), Postives = 176/255 (69.02%), Query Frame = 1 
Query:  127 GKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAP-------GGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQ-FGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHSP 867
            G   G+N+P+AG R   EL  G H +QLYS+ TPNGQKVTI LEE+G  YDA+  NIM  +QF S FV++NPNSKIPAL+D + P         +PL LFE+G+ILLYLAER  KFLPTDP A+ ECLNWLF+ +G APY G  FGHF +YAP+K++YA+ R++ E +R +DVLDKQL  K ++CG EYTIADMA  PW+RCL   Y+  E L + +Y NV  W   +  RPA  +GL +N    D A +E HSP
Sbjct:   29 GVMGGMNRPTAGKRFDSELPRGEHDLQLYSLGTPNGQKVTILLEELGVDYDAYTINIMQLEQFGSAFVDINPNSKIPALLDYAPPCESSXESEKEPLRLFESGSILLYLAEREKKFLPTDPRARTECLNWLFWQMGTAPYLGGGFGHFYKYAPLKIEYAIDRFAMEAKRIVDVLDKQLEQKDYVCGSEYTIADMAIYPWIRCLHTGYKGTEFLQLETYANVERWMATLAERPAVRRGLRVNGFGED-AVRERHSP 282
[Close]
BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A1Y5E8U5_9PROT (Glutathione-dependent disulfide-bond oxidoreductase n=1 Tax=Alphaproteobacteria bacterium 46_93_T64 TaxID=1856292 RepID=A0A1Y5E8U5_9PROT)

HSP 1 Score: 278 bits (712), Expect = 2.870e-85
Identity = 144/257 (56.03%), Postives = 180/257 (70.04%), Query Frame = 1 
Query:  124 GGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEM------GFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQ-FGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCL--EVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINS--GARDGAYKEYH 861
            GGKF+ +N+P AG+   KEL VG HPIQL+S+ATPNG KVTI LEE+      G +YDA+  NI  GDQF SGFV++NPNSKIPALVD S    KP  +FE+G+ILLYLAE+ G FLPTDPAA+ ECL+WLF+ +G APY G  FGHF  YAPVK++Y + R+S EV+R LDVLD++L    ++CGDEYTIADMA  PW   L     YEA E LD  SYKN+V W +++  R A  +G M+N   G  +   +E H
Sbjct:   20 GGKFANINRPIAGSTHDKELPVGKHPIQLHSLATPNGVKVTIMLEELLAAGHTGAEYDAYLVNIGEGDQFGSGFVDINPNSKIPALVDQSTD--KPTRVFESGSILLYLAEKFGAFLPTDPAARTECLSWLFWQMGSAPYLGGGFGHFYAYAPVKIEYCIDRFSMEVKRQLDVLDQRLATNKYMCGDEYTIADMAIWPWYGALVDNRVYEAGEFLDTQSYKNLVRWTKEIGERKAVQRGRMVNRAFGPEEEQLRERH 274
[Close]
BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: UPI001D15CF05 (glutathione-dependent disulfide-bond oxidoreductase n=1 Tax=Sneathiella sp. HT1-7 TaxID=2887192 RepID=UPI001D15CF05)

HSP 1 Score: 278 bits (712), Expect = 3.170e-85
Identity = 142/261 (54.41%), Postives = 183/261 (70.11%), Query Frame = 1 
Query:  112 KMKPGGKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEM------GFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQ-FGHFTRYAPVKLDYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCL--EVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMINS--GARDGAYKEYH 861
            +M+ GG+F+ +N+P AGA   KE  +G HP+QLYS+ TPNG KVTI LEE+      G +YDAW  NI  GDQF+SGFVEVNPNSKIPAL+D+S  G KP+ +FE+G ILL+LAE+ G+F+PTD A +AECL+WLF+ +G APY G  FGHF  YAP K +Y + R++ EV+R LDV+D+QL    F+CG+EYTIADMA  PW   L     YEA E LD ASYK+V  W ++V  R A  +G M+N   GA +   +E H
Sbjct:   16 EMESGGRFASINRPIAGATHEKERPIGKHPMQLYSLGTPNGVKVTIMLEELLAKGFSGAEYDAWLINIGQGDQFSSGFVEVNPNSKIPALMDHS--GAKPIRIFESGAILLHLAEKFGEFIPTDVAERAECLSWLFWQVGSAPYLGGGFGHFYAYAPEKFEYPINRFAMEVKRQLDVMDRQLADNQFICGNEYTIADMAIWPWYGALVQNRVYEASEFLDTASYKHVNRWTEEVGARDAVRRGRMVNRTYGAPEEQLRERH 274
[Close]
BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Match: A0A0V0QWI4_PSEPJ (Thioredoxin-like fold n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QWI4_PSEPJ)

HSP 1 Score: 277 bits (709), Expect = 1.260e-84
Identity = 132/237 (55.70%), Postives = 165/237 (69.62%), Query Frame = 1 
Query:  127 GKFSGLNKPSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIMSGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGKFLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKL----DYAVTRYSTEVQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMASYKNVVAWRQKVETRPATAKGLMIN 825
            G F  +N   AGART +EL  G HP QLYSM TPNGQKVTI +EE G  YDAW  +IM GDQFTSGFVE+NPNSKIPALVD S      + +FE+G+ILL+LAE++GKF+P DP  K ECLN LFF +G  PY GQ GHF++YAP  +     YA  RY  E QR   VLD+ L  +++L G+EYTIADMAW PW++C++  Y  ++TL+M SYKN+  W + +E R A  +G  IN
Sbjct:   52 GNFGSINSAKAGARTQQELKRGEHPYQLYSMGTPNGQKVTIFMEEAGLPYDAWLISIMKGDQFTSGFVEINPNSKIPALVDYSQDKENGVRVFESGSILLHLAEQTGKFIPQDPKLKTECLNLLFFQMGAGPYIGQLGHFSKYAPKGIWFDHSYAYERYKLETQRICSVLDQLLEKRTYLVGEEYTIADMAWYPWIKCIDYGYNLWQTLEMDSYKNINRWIKLLEQREAVQRGNKIN 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C3_ECTSI7.710e-18386.16Putative Glutathione S-transferase n=1 Tax=Ectocar... [more]
A0A835ZJ35_9STRA1.860e-11662.03Putative glutathione S-transferase n=1 Tax=Tribone... [more]
A0A7S4JSJ9_9EUKA1.260e-9757.77Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
E8Z6K5_PFIPI1.220e-9559.76Glutathione S-transferase (Fragment) n=1 Tax=Pfies... [more]
A0A2R5GYV1_9STRA2.040e-9458.85Glutathione S-transferase n=1 Tax=Hondaea fermenta... [more]
A0A7S3PBB9_9STRA1.430e-9054.83Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A448ZIJ3_9STRA1.010e-8654.51Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Y5E8U5_9PROT2.870e-8556.03Glutathione-dependent disulfide-bond oxidoreductas... [more]
UPI001D15CF053.170e-8554.41glutathione-dependent disulfide-bond oxidoreductas... [more]
A0A0V0QWI4_PSEPJ1.260e-8455.70Thioredoxin-like fold n=1 Tax=Pseudocohnilembus pe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig147contigP-littoralis_Contig147:260932..268128 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1381123.AYOD01000021_gene2019
Preferred nameMA20_16405
PFAMsGST_C,GST_C_2,GST_N
Model size1997
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K11209
Hectar predicted targeting categorysignal peptide
Exons7
Evalue1.08e-88
EggNOG OGsCOG0625@1|root,COG0625@2|Bacteria,1MUN3@1224|Proteobacteria,2TTDF@28211|Alphaproteobacteria,43GUB@69277|Phyllobacteriaceae
Ec32 ortholog descriptionPutative Glutathione S-transferase
Ec32 orthologEc-16_001680.1
DescriptionGlutathione S-transferase
Cds size870
COG categoryO
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig147.42.1prot_P-littoralis_Contig147.42.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig147 260932..267001 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789694.3120155-CDS-P-littoralis_Contig147:260931..2610721680789694.3120155-CDS-P-littoralis_Contig147:260931..261072Pylaiella littoralis U1_48CDSP-littoralis_Contig147 260932..261072 +
1680789694.3253691-CDS-P-littoralis_Contig147:264200..2643621680789694.3253691-CDS-P-littoralis_Contig147:264200..264362Pylaiella littoralis U1_48CDSP-littoralis_Contig147 264201..264362 +
1680789694.3364868-CDS-P-littoralis_Contig147:264841..2649281680789694.3364868-CDS-P-littoralis_Contig147:264841..264928Pylaiella littoralis U1_48CDSP-littoralis_Contig147 264842..264928 +
1680789694.349318-CDS-P-littoralis_Contig147:265328..2654451680789694.349318-CDS-P-littoralis_Contig147:265328..265445Pylaiella littoralis U1_48CDSP-littoralis_Contig147 265329..265445 +
1680789694.3613906-CDS-P-littoralis_Contig147:265959..2660391680789694.3613906-CDS-P-littoralis_Contig147:265959..266039Pylaiella littoralis U1_48CDSP-littoralis_Contig147 265960..266039 +
1680789694.374858-CDS-P-littoralis_Contig147:266299..2664161680789694.374858-CDS-P-littoralis_Contig147:266299..266416Pylaiella littoralis U1_48CDSP-littoralis_Contig147 266300..266416 +
1680789694.3838918-CDS-P-littoralis_Contig147:266835..2670011680789694.3838918-CDS-P-littoralis_Contig147:266835..267001Pylaiella littoralis U1_48CDSP-littoralis_Contig147 266836..267001 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789694.3927042-UTR-P-littoralis_Contig147:267001..2681281680789694.3927042-UTR-P-littoralis_Contig147:267001..268128Pylaiella littoralis U1_48UTRP-littoralis_Contig147 267002..268128 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig147.42.1

>prot_P-littoralis_Contig147.42.1 ID=prot_P-littoralis_Contig147.42.1|Name=mRNA_P-littoralis_Contig147.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MSDSGSKTIPMAAGVGLAAAGLLVGLAGPKIVEKIILKMKPGGKFSGLNK
PSAGARTVKELDVGVHPIQLYSMATPNGQKVTIALEEMGFKYDAWYTNIM
SGDQFTSGFVEVNPNSKIPALVDNSAPGGKPLHLFETGNILLYLAERSGK
FLPTDPAAKAECLNWLFFNIGEAPYFGQFGHFTRYAPVKLDYAVTRYSTE
VQRALDVLDKQLNGKSFLCGDEYTIADMAWLPWVRCLEVYYEAFETLDMA
SYKNVVAWRQKVETRPATAKGLMINSGARDGAYKEYHSP*
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mRNA from alignment at P-littoralis_Contig147:260932..268128+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig147.42.1 ID=mRNA_P-littoralis_Contig147.42.1|Name=mRNA_P-littoralis_Contig147.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7197bp|location=Sequence derived from alignment at P-littoralis_Contig147:260932..268128+ (Pylaiella littoralis U1_48)
ATGTCTGACTCGGGGTCGAAGACTATACCCATGGCTGCGGGAGTGGGCCT
GGCGGCCGCCGGCCTTCTAGTCGGACTAGCGGGCCCTAAGATTGTGGAGA
AAATCATTCTCAAAATGAAACCTGGCGGGAAGTTCAGTGGGGTGAGTGTT
AGTGTTGTGTACCCCGGAGCAGTGCGGTGAGTGCTGTGTACTCCGGAGCA
CCAGGTACCAGGTGCATGTTATGTTTCCGATCTCTCATCCTCGCTCTTTA
CAGTCAATCTCTTCAAATCTGTAACAAAAGTACGCGTAGGAGGCAGCCGG
AGTCACAGGTGAGGCCTGGTTTCTTGCGGGGTCCAGCATCGCACAAGTTC
CCAACCCAGTGGGGGCTTGATAGACAGAGCTCCATCTCGATCTCTGCACT
CGTGGGAGATTCGGAGAATTTCACCCGCCATCGGCCCCGTATAATGGGAT
GTTGACAAAATATGCAGCAGTTTGTAGCTCTTGCCAAGGTCTCCAGGGTT
GACGTGGTTGTAAGCTTTCATGTAAAAGACTGCCAGCAAGAATGAAATCC
CCTCGTGTTTGAGAACCTATAACGGTTGCTGTGCTCAGTGAACACAATGG
TGGTGTGGACATCACTAGTGTTTACTTTGTATCCGCTTGGTGTTATTTTC
ACATGTGGCCACCTACGGCAACCGTGGGTGGTAGCCGTTCCCGGAAACCC
GGGGCTGCTTGATGATATTTTTGGCTCCAGCGGCACCAAATACCATTTTT
TACCAGCGTGTCAAACTTCTACCGCGTACGACACAAGATAACACACCTCG
GTGATAACATTTCGGCGTTTATTAATATTATCACCGGGTGTGTTATTCTA
TTGGGGGGGGGGGGGGGGGTGCTATTTTATTTAACCCGGGTGATAGAGTG
CAGGTCGCCGGAGCCATTTATGGGGTGTGACAACCATGGGGTGTATTATC
ACTGCTGCACTCTCTTAAAAGGGGTTTGGTCATAAATGGGGTGCGATAAT
CATGGTGTGTAATGACACGGCCACACTCCGTAGGGGGCTTGGTCATGAAT
TGGGTGTGACAACCATAGGGATGTGGTAACACTGCCTCACTCTTTGCAAG
GCGTCTGACCACAAATATGGTGTGATAACCATCGTGTGTGATAATACTGC
CGGCCAATAAGTTGCAACCGTACTGTTGCTACACTTGCAAGGGGCGTAGT
ATTGAAGAGGTGTGACAAAAATGTCACAACTTTCTTCCGGCCCCAGTACA
GAGTGGAAACGTTTGGCGGGGGGCTGCTAACAGGAGAGGCGATAGACCTC
TTGAGCCCAAAACCCTTGAGTTGGACCCCAACAGCCCCTCAATCGACAAG
AGCACAATGTTGCGATGTACCGTACTCCGTGCTTCGTAATAAAAAAAGCG
TGTCATCCGTGTACCACCTGAGAAAAGACATCAACATGCCAAGAAGGCAG
GAGAGAAAATCAATTCGTTCGTCAAGAGCGTTATTTGCTGCTGCCCCCTT
CACAGAGGGGAATGCACAGAGGTGGAACCGGCAGCAGGAGGGGCTCCGTG
ACTGCATGCGGCGTGAACCCAGGGGGTGTGTTATCTTATGTGACCGGGTG
ATAAAATGGGCCCCTCTGTGTGTGTGTTGTCATCCCATTTATTCTGAGCA
GCAGTCTACACCTTTCGGTATGAAGTGCGTGCATCAGCCGGGGTCACACA
GAAATAAGGTCACACAGAAATAAGGTCACACACGAGTTTTTTTGTTGTTT
ATTTGGTGAAAATGTACAAAAAATAGCACCGGGGTGTTTTTTGTCGGGGC
GTGTGTTATCTTGTGTCGTATACGGTAGATGAAACATATTTGGCAGTACT
CCCCCCTGACTGCTTTATATCCCGCCCTCTCCTGTTGAAGCCTTACGAGA
CACTCCTGTAGAATCTTTGCAATGTACCGCAATCAAGTCCCTCATGGACC
CCATCTCTGCGATTTCTCAGTAAAGACCTTGAAGCTCGAGATGAAGGTGC
TCACGTTTTGTTTTGGGCACCGTCTTTCCGCACACTGCTGTTAGAATTTG
ACGCAATAGGCCCAGAAAGCTATGCTTCCGTTGCGGACAGTGCAACCTCT
TCACAAACGATCACGCTGCTCGAGATCGCCACAGCCTTCTGATGTGGTGC
GTGAGTGGCGTCCCATGCCTTGACGGCAGCACCAGGCAGCCGAAAAACGT
TTCTAGAAGTACCCCTGTGAAATTGTGAAATCATATCTAGATGCATGCGG
CAGCCCGAAGTTGCACCAAACTAGGATATCAATTGAGTAATTTTGCACGA
TGCCGACACTTCCCGCGTGTTTATCCCCCAATACACACGGAATGGGCGCG
AGTCTAGCTGGTTCACCGAGCGATTTTACTGGCCAGAAATATTGATAACT
TTTCGGCTCCGCACAGAGACAATTTTGATCCTCGGCCTAAAGATTCTTAC
ATAGGAACTCGTGCTTTTGGTTGAGTTTTTGGCCCGCTCGAAATAAAGCT
GCATTTGTGCAAATCCTTGGCTCTATGACCCCTGTTTTTTTTATGAAACG
CTGTTTGTGTACAAGCTCCTTCTTTTTGTACTAAACATAGCGTAGCCTTA
CCGCCAGTCTCCAGGGAATGTTTTCCCTCCGCCAGCCACTCCTTCTAGCC
CAGTTCACCCGAGCACCACCTTCGTCCTGAGGTGCACCCTTTAATTCATA
CTCAGGGGCTCAGCAACCCTTCCGGTATTTCCCTCGTCAGGAATTGAGCC
GAATTCTTGAAGTCGACCAAACACTGCTGAGCACCACAGCAAACTTCGTT
GCTGCCATCCCAAGGGTTTGGGCCAACAAACTGGGCGCCTTATGACAATT
AACACAGTGGCTACTCAGAGAACACAGCACGTCTCCAGCGTCCCCTTTTG
CAAATATGATAATGGGGGTCGAAAACAAATGCCCCCCGACTTCTCAGTTG
TCTGTGTTCTGGCAGGCACATTGAGGTTGTAACGAAACATCAATCTACAT
TATATGCCTTGCTCTCATATCTTCGGGCAAGGATGGAAGCACGGACCGGA
CTTGATCCGCGGCACGCACGCAACACAAGCCCCCCTCCCCGCCTGCTGAA
TTTTCATGAATCTAGTTTTGCCAATGTCGCATGACCAGAGTCGCAGACGT
GACGAAAACACTTTGTGGTGGTGCACCTCCGTATTCCCACGCGCGTTGTG
CATCTATTACCTTCCGAAGGTCGAATATTTATTGACTGTGTTTGCTCCCG
ATGCTGATTTATACAACAGTTGAACAAGCCATCGGCTGGCGCTAGGACAG
TGAAGGAGCTCGACGTCGGCGTGCACCCCATCCAGCTGTACTCGATGGCC
ACGCCGAACGGCCAAAAGGTTACCATCGCGCTGGAAGAAATGGGCTTCAA
GTACGACGCGTGGTACACGAACATCATGTCGGTGCGGCGATGTTTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTCTGTATCTTGTTTTTTATGTCGAA
TGTTGTGTATGGGTTTGAGTCGCGGGATAAGCTACGAGAAAAAGCAGGCA
GGCGAAAAAGAAAGGCCTGCTGCATACGCCAGGTGACCCTTTATTCACGA
CTTTTGTTCTCGTCGCTCCGCCGATATGTATTTACTGAGGGTATGAATCC
CAAACGAGGGTTAGTGCGTGATTCCCATTCCTGCGGCACAGTATTCCAAG
CGCAAGTACGCCCCCCTCCCCGCCGCACCTGCGTATCCCCCTCCCCAACC
CTCCTATTCGAGTAACAATCATATGACATACTTGGATCTACTTGAACCAA
CTGAGGATGACGTTTCTTGTCCCCGTTGACCCTGAGTTTCTTGTCCGGCC
CCTCACGCGCGACGTTCCCGTGAACCCTGGGTTTGTTGGGATCGATCCGT
CGTCCGTCAGGGGGACCAATTCACCTCCGGCTTCGTCGAAGTCAACCCCA
ACTCCAAGATCCCGGCTCTGGTGGACAACTCGGCGCCGGGCGGCAAGGTG
CGCACGTTGCTCGTCGTCGTAGATACGCCGGGCAGCTCCGCCGCCCCCTT
TGTTTCTGTTAGCGGCGAAACGTGTACGCCGTAAGTACAGCATTTGTTGT
GATTTGCTCGCACCGTTTCCGATACGCGCCGTATCATACGTAGATGTTTA
TGATGCGAGACCCGATTCGTTTTCTGCGTAAAGGTACAAGTTAGAGTCGA
GTCCGGATCGATCCCGTAGCTTCCCCATATCTACTTGGGCTTTATCTCTC
GTTGCTCCTGCCTCAGGGTAACTACGCGCCCGAACGTAGGAAGCTCTAGC
CGCTGTGAAAAGGATGCCCTCGTTTCCTGACAGCATAAGTCTGTTGTTGC
TCCGCGCCCTCTCCTGTGAATCCCCGCGCCCCTTTTTACGAGAAAAGCCT
CTTCACCTGTTCGAGACCGGGAACATTCTGCTGTACCTTGCCGAGCGCAG
TGGCAAATTTCTGCCGACAGACCCCGCGGCGAAGGCGGAGTGCCTCAACT
GGCTATTCTTCAACGTCAGTTTCGCGCGTGCAGATTGATAGTTTTCGTCT
GCAGTCAGAGAGCGGCGCTGGGCTTGCTGTTGCGGCTGACGGCGCCTGAC
CTCTTTAGCGAGATTGAAATACGTGAAGTTTTTTGCGTTCTCCTCCGCGC
TCTAGTTCTGTGGCGGTGGTTTTATTTTTGGCTGCTGCGAAGTTGATGGC
TAGTCTGCCCGTGTTGTTGACTACTCGGCGAGCCGCACATTTTGCTATCG
ACACGCGCCCAGCCTACACCCACACCTCCAACTTCGGAATTGTGAAGGGG
AGACGAGAGGGGTGTCTAAACTACCGGTGCGGTGCTATAGCTACGTGGTT
GGCATTTGGCAATTGGTTTCTAACTTGGCGAAAGAAAACTCCAGTTTCCA
AAGGCTGAAACTTCTCCGAAACATCTCCGGTCTGCTCGAAACAATTCATT
TCCCGGTAGATCCTCGGCGGCATGGACAGTTTATGTTTCAGTAGTTCACC
GCACACTCTTTCGGCGTGTTCGTGTCAGATTGGCGAAGCGCCATACTTCG
GACAGTTCGGCCACTTCACGAGATATGCCCCGGTAAAGCTCGACTACGCC
GTCACCAGGTGAGGGGACTATATGCGCTCAGCTGGGCTTTCGGCTTTGCT
GCGTGATTGCGCCTTGTGTTCTTGGGCATCGTGCGCAACCAACCCATCAA
CCTCCTGGTTTAGTGTGGCTTGAAATTGTCAAGAAATATCTGAACGCGCT
GGAGAGTCGACGATTTTCGCTCAGATGTTTTTTCTGCCCCTTTCTCGGAG
CTTGACTGCGGACCTTGTCGGTTTGTTTGTCTGGCTGCTGGTGTGTCGCG
GCGAAACAACACTGAAAGGTATTCTACCGAAGTGCAACGCGCCTTGGACG
TGCTGGACAAGCAGCTGAATGGAAAGAGCTTCCTTTGCGGCGATGAGTAC
ACCATCGCCGACATGGCATGGCTTCCGTGGGTTCGGTAAGCCCCCCCCCC
CCCCCTCGCGGTTTCATTCTCGATGTCGTGTTCTGCATGAGGTGGACGTG
AGCCAAACTCGCGAGATGTGGCTCAATAGGAGCAGGGGAGCAGCAGGGTC
ATTCCCAACAGCTATTGGTGGCGGCTTATGACATGTTCTGTTTGCGATGT
AAGCCCTTTCGTTCTCGTCAACATTCAAGGTCTGACACGTACGTCGTGGC
CACGTTTGGTGTTTGATCTGAACTCTTTGCTCGATTTTTTGCCGGCAGTA
GAAGCAGCCCCATTATCGTTTCGTGGTCCCGATAACTCCTCACACGCGTT
TCTAGTGTAGCGAGTTGCCTGAACTCTAATTGTTTGCCGCGGCTTGACAA
CAGTGCTTACGCCAGTGCACGTATGCCACCAACACCGTCACCACACCGAG
GCAGGTGCTTGGAAGTCTACTACGAGGCCTTCGAAACCCTGGACATGGCA
AGCTACAAGAACGTTGTGGCCTGGCGCCAAAAGGTGGAGACCCGACCGGC
GACAGCGAAGGGATTGATGATCAACTCTGGCGCGCGGGACGGGGCGTACA
AAGAGTACCACTCCCCTTAAACCGCTCATCCTTTGCGACCTTTGTTTATT
CTGTAACCTAATGAACCGGCTCGGAAGGTTTTCTGTCGATCAGTTAATCG
CTTTCAAGAGATGCGAGTGGCGAGTGTTCGATGGAGTATGATACGAGGGC
TCTGGCACACTAGCGGTTTGTGTCATTGGATATTTCTACTCTGTACTCGT
GATCATTTTAATGTTAAGGTTGACTCAACGGGTTGACGTTCGCAGGTTGA
TAGGCTCACGGTGTTCGGTCGTACGGAGCCACCAGAGTTGGCCGAGATTG
CTCGTTGGTGCTGTTACTGCCCTGTGCCAACGGTAGCTTTTCAACGGAAC
CCGATTACGTACCGCCTTTTATCACAGCGTGGCTGTGGGGCAAATATGAC
GGGTGTGTCTCCCGTATGGTCTCTGCGTAGCTTGCGATGGATTTAGTGGA
GTAATTTTTACTAGTGGCTGAAATAATGTCGCAGCGCCGCTAAGCAAACA
CAACGGCGCATCGATGAAACATCGATTGCCATACAGTACTGCGCTCTGCG
TAAGACTGGGGGGGCGGCCAGGCTTCATGTTGCGCGCGTTCCGTTGTGTC
GGTGTTCGTGATGGGTGCTGGGTGCGGTCGTACCTTTTCGCGCTGACGGG
GGAGGGCAAGAGCCGCTGTCCGTGACTTGCATTGCCGACTAAGCGCGGTG
CCTGGTGTTGTTCCAAGCTGGTGTGTTCATCGCACGTCTCTTGTCACCGC
CATCCGCTCCAAGTTTCTCACCCCCCCGCCCCATCACTTCCTTATGGCCC
ACAATGTGCGCAACTCAAATCTTTGAGTTGGCCCCACGCGGGGGTCGCGG
CCAAAGGACCCCCCTCCTCCCATGTACATGAAAAGCTGATGAGGGTGATT
ATTTTCAATTATGAGGACCAACTGCTGTTCAGTGCTGCCGTCAAAGTCTG
TACGTGTGAGGACAAGTACCCAATCCCACGACCTTCGGAAAATGTTTTTC
TTGCGAACTTCATCCGTGTCCCATGTTTGAGAATTGATGGCACATCGTCT
GGTTCAGTCTACGTACTGGTCTCCAAGTCTTTTTGTTTTCGTGTAAGGAG
GTCAAAGGTGAAAATAACGGGAATCTAATCAAATGAAGTCGAACTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig147:260932..268128+

>mRNA_P-littoralis_Contig147.42.1 ID=mRNA_P-littoralis_Contig147.42.1|Name=mRNA_P-littoralis_Contig147.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig147:260932..268128+ (Pylaiella littoralis U1_48)
ATGTCTGACTCGGGGTCGAAGACTATACCCATGGCTGCGGGAGTGGGCCT
GGCGGCCGCCGGCCTTCTAGTCGGACTAGCGGGCCCTAAGATTGTGGAGA
AAATCATTCTCAAAATGAAACCTGGCGGGAAGTTCAGTGGGTTGAACAAG
CCATCGGCTGGCGCTAGGACAGTGAAGGAGCTCGACGTCGGCGTGCACCC
CATCCAGCTGTACTCGATGGCCACGCCGAACGGCCAAAAGGTTACCATCG
CGCTGGAAGAAATGGGCTTCAAGTACGACGCGTGGTACACGAACATCATG
TCGGGGGACCAATTCACCTCCGGCTTCGTCGAAGTCAACCCCAACTCCAA
GATCCCGGCTCTGGTGGACAACTCGGCGCCGGGCGGCAAGCCTCTTCACC
TGTTCGAGACCGGGAACATTCTGCTGTACCTTGCCGAGCGCAGTGGCAAA
TTTCTGCCGACAGACCCCGCGGCGAAGGCGGAGTGCCTCAACTGGCTATT
CTTCAACATTGGCGAAGCGCCATACTTCGGACAGTTCGGCCACTTCACGA
GATATGCCCCGGTAAAGCTCGACTACGCCGTCACCAGGTATTCTACCGAA
GTGCAACGCGCCTTGGACGTGCTGGACAAGCAGCTGAATGGAAAGAGCTT
CCTTTGCGGCGATGAGTACACCATCGCCGACATGGCATGGCTTCCGTGGG
TTCGGTGCTTGGAAGTCTACTACGAGGCCTTCGAAACCCTGGACATGGCA
AGCTACAAGAACGTTGTGGCCTGGCGCCAAAAGGTGGAGACCCGACCGGC
GACAGCGAAGGGATTGATGATCAACTCTGGCGCGCGGGACGGGGCGTACA
AAGAGTACCACTCCCCTTAA
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