prot_P-littoralis_Contig147.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig147.24.1
Unique Nameprot_P-littoralis_Contig147.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length424
Homology
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BLAST of mRNA_P-littoralis_Contig147.24.1 vs. uniprot
Match: A0A6H5K8X9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X9_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.680e-42
Identity = 171/459 (37.25%), Postives = 205/459 (44.66%), Query Frame = 0 
Query:    1 MKRSRTCLNLVELDTTTASPKRTCSLPNLASSGSXXXXXXXXXXXXXLRQNRQDTLPFFHQYTAPSMCQGPPTGYQQPXXXXXXXXVVRAEVAFVVESIVRSQGSLSEITIHEGQQFIGEEVAAGAGGAEAAAAEPQSSRAG-----------HHGGVSVSLFGGAVRGSLFEDEY-SSDYFCGVASSDEAEDDSXXXXXXXXXXXXXXXEAMARDFNVNGSVCCVRQISDADSTTSCXXXXXXASSSSSGGGGGTGVGC---TFEGETDDYV--SGTDFVGCAQGSAASTDVAAAAAAPKSWGECSFGGGDYSAGGGSSGNGPGGVPISSGPHAGGSWRSPTGGGPRVTVRICSPPDDSNSNSRLRRTVPPPWPMSAVPHSSMMNTW--------------------QHHGHLHR----RGRGGSDEED-GSLVFANRFAPSDDAKVLVEMARLRLVD 417
            MKRSRTCLNL ELDT  A+PKRTCSLP+   S S             +RQN Q+ L F  Q+ A ++ QG                   A+ AFVVESIVRSQ SL+EITIHEGQQFIG+E        EAA A PQ                      +SLFGGAV GSLFED   SSDYFCGV SSDEA++DS                  +                        XX    + SS+SG G   G G     FEG+ D  +  +   FV     +AA    +  AA                         P  +  ++GPHAGGSW+    G PRV+VRI        ++     TVPPPWP + +P S++MN W                    Q  G   R     GR GS EED GSLV A     SDDAK+L+ M RLRLVD
Sbjct:    1 MKRSRTCLNLFELDTP-AAPKRTCSLPSNLGSFSSSSISSSSSFSLSVRQN-QERLLFLQQHAASTLAQGTAAA-----------PATIADGAFVVESIVRSQRSLNEITIHEGQQFIGQE------SNEAATAVPQQQSLAAXXXXXXXXXXXXXXXPLSLFGGAVIGSLFEDGGDSSDYFCGVDSSDEADEDSTVIAASAAAECAISTTCDSXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSCSSASGSGAIGGFGAERYAFEGDDDSIIGIAADPFVDLDTAAAAGLSFSLPAAHXXXXXXXXXXXXXXP---------PQPLVAATGPHAGGSWQPAAAGAPRVSVRISGGXXXXGTSRERSMTVPPPWPATMLPTSALMNGWSAGPIAGAGHSGDGGNSWRRQRQGGRRRCRGDSGRDGSGEEDDGSLVSA-AVGLSDDAKMLIGMNRLRLVD 430
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8X9_9PHAE2.680e-4237.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig147contigP-littoralis_Contig147:154808..162823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig147.24.1mRNA_P-littoralis_Contig147.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig147 154696..165980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig147.24.1 ID=prot_P-littoralis_Contig147.24.1|Name=mRNA_P-littoralis_Contig147.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=424bp
MKRSRTCLNLVELDTTTASPKRTCSLPNLASSGSSSSFYINNTTAAALRQ
NRQDTLPFFHQYTAPSMCQGPPTGYQQPTTTTTTTTVVRAEVAFVVESIV
RSQGSLSEITIHEGQQFIGEEVAAGAGGAEAAAAEPQSSRAGHHGGVSVS
LFGGAVRGSLFEDEYSSDYFCGVASSDEAEDDSNSDSVAATATATTTAEA
MARDFNVNGSVCCVRQISDADSTTSCARQVSDASSSSSGGGGGTGVGCTF
EGETDDYVSGTDFVGCAQGSAASTDVAAAAAAPKSWGECSFGGGDYSAGG
GSSGNGPGGVPISSGPHAGGSWRSPTGGGPRVTVRICSPPDDSNSNSRLR
RTVPPPWPMSAVPHSSMMNTWQHHGHLHRRGRGGSDEEDGSLVFANRFAP
SDDAKVLVEMARLRLVDAETASA*
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