mRNA_P-littoralis_Contig147.17.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE) HSP 1 Score: 754 bits (1947), Expect = 1.260e-220 Identity = 935/1597 (58.55%), Postives = 991/1597 (62.05%), Query Frame = 3
Query: 10533 LAESKDSGGYQRQRVRA---RKSDGRFELRKSTERSISMPYLSREGGARGTPALAEAKTPADVATTTATPTVGGGDGGRATATAGSPAVPAAPPVPHMLLSPELMVELMEALIEFFAGVAVPPPAADAVKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAPRPNLVFAALQLLARLVRDYNRASRFIRAGGASSLLSLPGASAFEGGTALVSVVFRHLLEDPATLQSAMETEIRAAFSRLSXXXXXXXXXXXXXXXXXXXXXXXXXX-----------DRPPTVRLLPLMSALRPLLVRDSRAMIRASANVLRSVPVDSGGAGXXXXXXXXXXXXXXXMVALXXXXXXXXXXXXXXXXXXXXXXHAGPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQAAA---NRTTVMSLLLSELILRHEGVVRRSASQAXXXXXXXXXXXXXXXAAEFLDEVKLLELLSDLVLHLPACATAIHRFGQRERSSVFVARLLAPIPGDSVSPRPGSGAGVNRALRVLKVQRHAVVGAMAPSPTVVAFLLHALLPSPRAGDTAAKGIVDAEERRKRKALSARQGRKAQAAARLLLALCARAGEGRRRVLAELYSALSCNADGG--GGGTRAPAGGEGRARRTDREMWALQAWGELALGLAAPRAVHAAGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVAESMRRMKAKDDERGXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPASTXXXXXXXXXXXXXXXXXXXXXAMDVSTPARRTRGRRREVRTPSGGATTATPGSAGAGXXXXXXGSTGARTPGRARTPSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGSPAHNPRASRNARGTPGTASRGXXXXXXXGGT-RRLARGISRDSRQGSHSFADDDVMLDEAFGGQGARRSDNDMLVEVDLSSIIADMEDGER---------VVTAFMDTHEDNPSPLLPGSASVDDGIVVHAEIGGGGRGXXXXXXXXXDSSLVAAMTMHTDSAGEHSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMEEDDDXXXXXXXXXVDGXXXXXXXXXXXXXXXALDGXXXXXXXXXXXXXDFGH-PMEDVYVLGESDDAMPLDVEWPDADEMLVARQELGAFYAQVGWDPRAGXXXXXXXXXXXXXXXXXXXXXR---------------GVPPAYQR-----------VGGGVEVDGGDGWVARGAAAEQLSLWGVQPPPGLARQYATRHGDRAGGANLMAIPDFMESDSDALGQILRSMAPPGAAGGGVAPPLVRVVRGTGAPVEGRWTEMITHDLHAAPTGPSQNTTRLFPNGPSAATQAHVAPVVHPLLMRQPRAPGXXXXXXXXXXXXXXXXXXXXXXXXXXIAPSARQQAALGLLPSERLIWDGHGGGAXXXXXXXXXXILXXXXXXSGAMGMPEQALIDAIEE 15155
LAESK+SGG R+R+R + S+G E +S ERS S E G P LAE+KT + A P H+LLSPELM ELMEA IEFFAGVAVPP DA AAXXXXXXXXXXXXXXX LPAP PNLVFAALQ SAMETEIRA F RLS XXXXXXXXXXXXXXXXXXXXX DRPP V LL LM +LRPLLVRDS M+RA+ANVLRSV S GA A XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX GS AAA NRTT+MSLLLSELILRHEGV XXXXXXXXXXXX EFL LLELLSDLVLHLPACAT+IHRFGQRERSS + ARLLAP+PGD+V+PRPGS AGV RALR+L+ QRHAV GA APSPTVVAFLLH LLPSPRAGDTAAKGIVDAEERRKRKALSA QGRKAQAAARLLLALCARAGEGRRRVLAELYSALSCNAD G GGG R E R +RTDREMWALQAWGELALGLAAPRAVHA GNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVA+SMRRMKAKDD XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX T +TPGSA XXXXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX SR SRGXXXXXXX RR+ RG SRDSR GSHSFADDDVML AFGGQ A R+D DMLVEVDLS+IIADMEDG+ V FMD H+D P XXXXX + L+A +DS GEHSED XXXXXXXXXXXXXXXXXXXXXXXXX XXX X M+E+DDXXXXXXXXX XXXXXXXXXX DG D GH ED+YVLG DD + D W D ++ V QEL A YAQVGWDP A XXXXXXXXXXXXXX GVPP +Q+ +GGG GG+GW+ARGA AEQLS+WGVQPPPGLARQYATRHG+R GG N+M + DFMESDS AL Q+LRS+ P GA G G APPLVRVVRGTG G WTEMI HDLHAA GPS NTTRLFP+GPSAATQAH APVVHPLL+R RAPG XXXXXXXXXXXXXXXXXXXXX RQQ+ LG+LP+ERLIW XXXXXX +GMPEQ L+DAIE+
Sbjct: 982 LAESKESGGGLRRRLRPQADKPSEG--EKEESKERSTSPSRKDEETA--GPPTLAESKTSSADAXXXXXXXXXXXXXX---------------PTLHVLLSPELMAELMEAFIEFFAGVAVPPLPGDATAAAXXXXXXXXXXXXXXXGAA------------------LPAPSPNLVFAALQ-------------------------------------------------------SAMETEIRATFGRLSRASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDRPPAVSLLQLMGSLRPLLVRDSGLMVRAAANVLRSVAPGSDGA------------------AGPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAGTPRQRGXXXXXXXXXXXXXXXXXXAIGERVERDGRTDSGGSNGAGAATGGSGSFAAAPHQNRTTIMSLLLSELILRHEGVXXXXXXXXXXXXXXXXXXXXG--TTEFLGVANLLELLSDLVLHLPACATSIHRFGQRERSSSYAARLLAPVPGDAVAPRPGSAAGVARALRLLQAQRHAVAGAAAPSPTVVAFLLHVLLPSPRAGDTAAKGIVDAEERRKRKALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSALSCNADRGTGGGGGRGSVANERRDQRTDREMWALQAWGELALGLAAPRAVHAVGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLTRASVADSMRRMKAKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------TASTPGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR---------SRGXXXXXXXXXXGRRITRGTSRDSRLGSHSFADDDVMLXMAFGGQPAGRTD-DMLVEVDLSAIIADMEDGDEGGVRHGRGDAVATFMDMHDDEGDPXXXXXXXXXXXXXXXXXX---------XXXXXAGAGLMATHRPQSDSGGEHSEDRSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGHEAEMGGQGVDREED------------VMDEEDDXXXXXXXXXX-------XXXXXXXXXXDFDGGEDGD--------DDGHRDDEDMYVLGGPDDGLSFD--WADVHDITVGPQELDAIYAQVGWDPGAAXXXXXXXXXXXXXXETIPVQSAXXXXXXXXXRAGGRPGVPPVFQQAMDAGAXXXIGLGGG----GGEGWIARGATAEQLSMWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDS-ALNQMLRSLTPQGAGGAG-APPLVRVVRGTGGGDTG-WTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXX-GGRQQSVLGMLPNERLIWG-----------------XXXXXXXXXVVGMPEQTLVDAIED 2381
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: D7G2U2_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U2_ECTSI) HSP 1 Score: 683 bits (1762), Expect = 1.430e-208 Identity = 609/1086 (56.08%), Postives = 676/1086 (62.25%), Query Frame = 1
Query: 4009 MVGVLDCIPREPVYVAWPLLAAPTAAAXXEGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVAVVEELPPLLKAFSSLLRSLAATDWLAGVLTMVTRWAHSRSAQAVAEQQAASRGGLLLVSGIGRKVLERLMKLHRYALMELSRVKVGHHAWIQTLEAT-QTAAAVAVTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCQPQMPWPEPDFYRIHVVAQDGALVGSGLDSDGSVAVHTVEGGTVLVAYERAASSAGVMRYRTRHGWISEHTRGTGRQPIVEVLAVGLSGQGGEPSEEEXXXXXXXXXXXXXXXXXXQQIQHWGRRRPVVGLRATGCNALARFHTVMKQLVASFTRVLSGSLPRPHHREDMLPSMNPVAPAVCEFLSENLRNGFALGLGKTKAAFGGSICSEARCAHLAGALETASSALFDERRQ---VVNTLLLVRMELQETPLRLLLEACSFVFSTALEMVGGP----ESPGSPTLPFKEGI---EGDEDPSVALAILRKGGAVAPGSPGARAGAGAAGSSASQEAGVQQGWEAFNRSMDDHDEEVMKXXXXXXXXXXXXXXXXXXXXXTAGAKERQELSATMVEVLKVALSLMRRLSSRNLTAAGPFASTMRMRPPGHPQRRDWEAALAMAGEPVPMEGLAYRSAAAAGAAVAGSPVPAPPGVRGTAVGANRDPSASSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEAAGTRGIAAFAPAGVXXXXXXXXXADGGMMSPPDPQFSARPTSFWTMTVPMAVAG-----PPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXS------------GRP------MPKDGDSGRKKKPKAPRFSSDLFIRRVHLLVGEVLEPMWRDPRLAALPQEAVSRLLAAVLELMQSLHAESSHGNLVRHRQHALARSKEIASAAAXXXXXXXXXXGRXXXXXXXXXXRAGAGGGPRGQNAPPRWSFLSRGREQAPXXXXXPFVAEERTVTQLVEMGFTRDHVLMALRATESNRVEVAMEFLLTHPAP 7164
M+G+L+CIPREPVYVAWP+L A XX XXXXXXXXXXXXXX A ELPPLLKA S LLR LAAT+WLAG LT++TRWAHSR AQ A QQAASR G +LVSG GR+VLERLM+LHR ME SR K H W++TLEA QTA A +E XXXXXXXXXXXXXXXX C P+MPWPEPDF+RI+VVAQDGALVGSGLDSDGSVAVHTVE GTV+VAYERAA+SAGVMRYRTRHGWISEH RGTGRQPIVE+L+VGL+GQGGEPSEEE XXXXXXXXXXXXXX Q IQ GRRRPV GLRATGCN+LAR HTV KQLV +F RVL+GSLPRPHHRED+ P+MNPVAPAVCEFLSE+LR GFALGL +T+ + R + G + S +E + N LLVRME + PLR LLEACS++FS+ALEM GP +P SPT PFK G+ EG+ V A+ A A +A+ +G QQGWEAFNRSMDD DEEV K XXXXXXXXX KER EL A M+EVLKVALSL+RRLS+RNLTAAGPFASTM+M P GHPQ E DP + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G MSPP PQ PT PMAVA PPS XX XXXXXXXXXXXXXXXX G P P+DG + P PRFSSDLFIRRVHLL GEVLEP+WRDPRLA+LP EA SR+LA VLEL+QSL AESSHG+++RHRQ ALAR++E A+ XXXXXXXXXX XXXXXXX P GQ RW+F RGRE AP PF EERT+TQLVEMGFTR+HVL ALRATE+NRVEVAME+LLTHPAP
Sbjct: 1 MLGLLECIPREPVYVAWPVLPAEEDGTXXXXXXXXXXXXXXXXXXXXGSRS---------------APPNELPPLLKAMSGLLRCLAATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGAILVSGSGRRVLERLMRLHRNVFMEFSRAKAEHQTWLRTLEAANQTAPPSAEGKEQTTDXXXXXXXXXXXXXXXX---------XXCPPEMPWPEPDFFRINVVAQDGALVGSGLDSDGSVAVHTVECGTVVVAYERAANSAGVMRYRTRHGWISEHARGTGRQPIVEILSVGLTGQGGEPSEEETEXXXXXXXXXXXXXXLEQHIQQGGRRRPVHGLRATGCNSLARLHTVTKQLVTAFARVLAGSLPRPHHREDLTPNMNPVAPAVCEFLSESLREGFALGLDRTEGS---------RAVY--GPWQAPPSFTSEEHLEGNACAN--LLVRMERRGPPLRRLLEACSYIFSSALEMAAGPPDGSSAPASPTSPFKGGVVEGEGEGAGGVTAAVHGDNRATA---------------AAAAVSGSQQGWEAFNRSMDDRDEEVRKAVXXXXXXXXXGEK----------VKER-ELPAPMLEVLKVALSLLRRLSNRNLTAAGPFASTMQMWPSGHPQEEKGEI----------------------------------------------DPERNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------------------------------------------------------------SGTMSPPQPQAPGTPT-------PMAVAXXXXVEPPSTPDXXSRAAGARXXXXXXXXXXXXXXXXXXXSQSSKISRAPGGPGGKWLTSPQDGGKAKTNAP-PPRFSSDLFIRRVHLLAGEVLEPLWRDPRLASLPPEAASRVLATVLELLQSLQAESSHGSVMRHRQRALARNQERAAXXXXXXXXXXXXXXXXXXXXXXA---------PPGQLVAQRWNF--RGREPAPAPV--PFAPEERTITQLVEMGFTREHVLTALRATETNRVEVAMEYLLTHPAP 893
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: A0A6H5LD86_9PHAE (DUF913 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD86_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 5.400e-120 Identity = 448/944 (47.46%), Postives = 499/944 (52.86%), Query Frame = 1
Query: 1783 LRWVEAIFSLVWAVVSVQHGAAAMTECGLIPALLNIVQLNMDGQ----------------GFGGMGKPFHRRYVVSQAVQIIETAVVNNAAALSAFRELGAAEVLASAFSTEVGRLRDAGSETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWGEGDTSVV---PLADPSPSQKALLFSLLNALSITFQNQTQNNQQVGSDPLLEAFLTAAVMDVDTSQA*RGN*PKRYRPSLAFHQDQPNVAFVPLCSCLLCLPRYRTT*DATVVRGFFCLIDSTLRH*LCLLRALPSVTTSGHIICMPPPPRTTGIHYRCPRSMRDSVVSTTDKRVT*PSPP*RIIVACGGDAKSTAGCEGERSVEEGAERRVFGQG*YIRTVSFALWSTLLYTRSTQ*CGTHTTCDLCTPSVGLFLDEFGWSIYT*TKL*QSIDTRAILHGGWRGGSHHDVSNCVPPPFPRVP*V*LLLSPXXXXXXXXXXXXVLLFFVGFLPLSAQQMLHERCLMQQYVANSGQLLESALSRPENAKSFADAGGDEVLLSMFSLAVPGPRALLARAACA---------------WGGSSAQQGLANHAASQALSTAMKALGTHDTGRLLERVLAELNKELDRLDAARKAVVDAGGVSAAVASVGGGGGDSGSDAMEVDGQPPAAAKYSGKSETQPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGG---EAATAGQN------------------NSELDMVGVLDCIPREPVYVAWPLLAAPTAAAXXEGEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVAVVEELPPLLKAFSSLLRSLAATDWLAGVLTMVTRWAHSRSAQAVAEQQAASRGGLLLVSGIGRKVLERLMKLHRYALMEL 4449
L WVE +FSLVWAVVSVQHGAAAMTECGLIPALLN+VQLNMDGQ GFGGMGKPF RRYVVSQAVQI+ETAVVNNAAALSAFR+LGAAEVLASAFSTEVGRLRDAG+ A XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX G E D S PLADPSPSQKALLFSLLNALSITFQNQ VGSDPLLEAFLTAAVMDV +R S D V L + L+ +T V + L + L +L A P+ PPP ++D VT P+ + + G ++ E VF Y G T+ VG LDE + H VP P+ + L+S L S+ ++L+ER LMQQY AN GQLLESAL RPENAK FADAGGDEVLLS+FSLAVPGPRALLARA+CA Q LANHAASQAL++AMKALGTHDT RLL+RVL L++ELDRLDAARKAV++AGG+SAAVAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A G+ ELDM+GVL+CIPREPVYVAWP+L A E E XXXXXXXXXX A ELPPLLKA S LLR L AT+WLAG LT++TRWAHSR AQ A QQAASR G +LVSG GR+VLERLM+LHR L+E+
Sbjct: 9 LLWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQVGLRLCSDCVHMVKGTGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAAAAGDNRSGGGCSGMVVDDPKGKAEGXXXXXXXXXXXXXXXXXXXXXXXDGKVKGTTXXXXXXXXXXXXXXATGGDPDGVQ-----GGAEDDASSAAGGPLADPSPSQKALLFSLLNALSITFQNQ------VGSDPLLEAFLTAAVMDV-------------FRNS-----DMFGGVLVALTATLI--SDVANQDPSTTVP--YLLRSGIVDEYLKVLTATPATPA--------PPP-------------------SSDLLVTVPNVLHALCLTHDGASRVQ-------------EANVFPASRYPE-------------------GNMTSV------VGAGLDEL------------------MRH--------------VPALRPQC--IKALVSSLKELVGKGDE----LLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVMEAGGMSAAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAVEGKGPPXXXXXXXXXXXXXXXXXXELDMLGVLECIPREPVYVAWPVLPA------EEDETADSXXXXXXXXXXKGHSSSSSGPRS--------AAPTELPPLLKAMSGLLRCLTATEWLAGALTLLTRWAHSRGAQTAAGQQAASRWGAILVSGSGRRVLERLMRLHRNVLVEI 802
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 6.720e-117 Identity = 491/1021 (48.09%), Postives = 540/1021 (52.89%), Query Frame = 3
Query: 14463 DGWVARGAAAEQLSLWGVQPPPGLARQYATRHGDRAGGANLMAIPDFMESDSDALGQILRSMAPPGAAGGGVAPPLVRVVRGTGAPVEGRWTEMITHDLHAAPTGPSQNTTRLFPNGPSAATQAHVAPVVHPLLMRQPRAPGXXXXXXXXXXXXXXXXXXXXXXXXXXIAPSARQQAALGLLPSERLIWDGHG---GGAXXXXXXXXXXILXXXXXXSGAMGMPEQALIDAIEEGLNLFIRPGQIGGARNPADPAARRLQGXXXXXXXXXXXXXXXXXXXXXGVGMANEGRWTDNGQPLTPAEGRTVLPMLDQVEQAIVARLIPSQAFDATAGGXXXXXXXXXXXXXXXXXXXXXQEENPGVESGQPAALSSETSTDDSGGGVGSLGRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSRGAEASRGLDLGLLPWPVDEGGAAARAGAVRGRAPARRQAGGGELEGDAAAARDNVAAMVERAMESAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSLSPRGPNMEAAPPAAAPALRGEGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTERERGTAADENDDSNDDAMDVDDGGVEESKGHDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGAEGAAEAEGGERG-MVCPPGMDPEVFAQLPAEMQQEVVREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRAREGAXXXXXXXXXXXXXXXXADPSRAAEMDNASIVATLPPEVRREVLLSADDTLLGTLPPNLVAEAMVLRERIIPHQAELQAAQAAQAAIYSGGVRVGGXXXXXXXXXXR----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAEAKNAHEGEWKLEADPKGSSNTRPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSDPRQLRLALQ 17501
+GW+ARGA AEQLSLWGVQPPPGLARQYATRHG+R GG N+M + DFMESD+ AL Q+LRS+ P GA G G APPLVRVVRGTG G WTEMI HDLHAA GPS NTTRLFP+GPSAATQAH APVVHPLL+R RAPG XXXXXXXXXXXXXXXXXXXXX RQQ+ LG+LP+ERLIW+ HG GG XXXXXXXX +GMPEQ L+DAIE GLNL + P G+ A RRL XXXXXXXXXXXXXXXXXXXXX M N GRWTDNGQPL AEGRTV+PML Q +QA A L+PS A GG XXXXXXXXXXXXXXXXXXX +E +A+ S XXXXXXXXXXXXXXX X X XXXXXXXXXX R+R A +R L AV A EG+A AA SSLSLSPR A A PA+ TAA + + A ++ G E G+DG A GA A + ++ ++ G+DPE A LPA+M++EV LEQEARNRR RE DPSRA+EMDNAS VATLPPE+RREVLLSADD LL TLPPNLVAEAMV+RERI PHQAE QAAQAAQAA Y+ GVR G XXXXXXXXXX A XXX R A +N HEGEWKLEAD KGS T PQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHP VRRAVVQALVH+IKSDP +LRLALQ
Sbjct: 123 EGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDA-ALNQMLRSVTPQGAGGAG-APPLVRVVRGTGGADTG-WTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSGXXXXXXXXXXXXXXXXXXXXXXXXGGRQQSVLGMLPNERLIWESHGVPVGGXXXXXXXXX------------VVGMPEQTLVDAIE-GLNLVV-PADAAGS------ATRRLXXXXXXXXXXXXXXXXXXXXXXX-XRMPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALK---GGGXXXXXXXXXXXXXXXXXXXPRE----------SAMESVA----------------XXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEAR---LXXXXXXXXXXXXXXXXMAVEDTASVS--------EGEAVAA--------------------------------------------LASSLSLSPR--REPAGETATTPAV--------------------------------------------------------TAAGSDAGAPPTAGSLETRGAAEEGGNDG----------------------------------------------------------------AAGAGFALLLQQEDQAELLEAAGLDPEALAALPADMRREV---------------------------------------LEQEARNRRMREAPGNAGGP----------VDPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPNLVAEAMVMRERI-PHQAEFQAAQAAQAAGYASGVRAGXXXXXXXXXXXXXXXSAARGSSGAQTGSXXXGATNVASAAQAIGAARQA-LRNTHEGEWKLEADLKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVRRAVVQALVHMIKSDPHRLRLALQ 862
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: D7G2U3_ECTSI (DUF913 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U3_ECTSI) HSP 1 Score: 348 bits (892), Expect = 2.410e-100 Identity = 351/673 (52.15%), Postives = 399/673 (59.29%), Query Frame = 1
Query: 1774 MDQLRWVEAIFSLVWAVVSVQHGAAAMTECGLIPALLNIVQLNMDGQGFGGMGKPFHRRYVVSQAVQIIETAVVNNAAALSAFRELGAAEVLASAFSTEVGRLRDAGSETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWGEGDTSVVPLADPSPSQKALLFSLLNALSITFQNQTQNNQQVGSDPLLEAFLTAAVMDVDTSQA*RGN*PKRYRPSLAFHQDQPNVAFVPLCSCLLC--LPRYRTT*DATVVRGFFCLIDSTLRH*LCLLRALPSVTTSGHIICMPPPPRTTGIHYRCPRSMRDSVVSTTDKRVT*PSPP*RIIVACGGDAKSTAGCEGERSVEEGAERRVFGQG*YIRTVSFALWSTLLYTRSTQ*CGTHTTCDLCTPSVGLFLDEFGWSIYT*TKL*QSIDTRAILHGGWRGGSHHDVSNCVPPPFPRVP*V*LLLSPXXXXXXXXXXXXVLLFFVGFLPLSAQQMLHERCLMQQYVANSGQLLESALSRPENAKSFADAGGDEVLLSMFSLAVPGPRALLARAACA----------------WGGSSAQQGLANHAASQALSTAMKALGTHDTGRLLERVLAELNKELDRLDAARKAVVDAGG 3738
MDQLRWVE +FSLVWAVVSVQHGAAAMTECGLIPALLN+VQLNMDGQGFGGMGKPF RRYVVSQAVQI+ETAVVNNAAALSAFR+LGAAEVLASAFSTEVGRLRDAG+ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX G PLADPSPSQKALLFS+LNALSITFQNQTQ +QQVGSDPLLEAFLTAAVMDV +R S D V L + L+ + +T A ++R ++D L+ +L A P+ PPP ++D VT P+ + + G ++ V+E F + +L+T + + T VG LDE + H VP P+ + L+S L S+ ++L+ER LMQQY AN GQLLESAL RPENAK FADAGGDEVLLS+FSLAVPGPRALLARA+CA Q LANHAASQAL++AMKALGTHDT RLL+RVL L++ELDRLDAARK +GG
Sbjct: 1 MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXVDDPKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXGKARGAPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGG-----PLADPSPSQKALLFSVLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDV-------------FRNS-----DMFGGVLVALTATLISDVANQDPSTTVAYLLRSG--IVDEYLK----VLTATPA-----------PPP-------------------SSDLLVTVPNVLHALCLTHDGASR----------VQEANV--------------FPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDEL------------------MRH--------------VPALRPQC--IKALVSSLKELVGKGDE----LLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKGGRGSGG 552
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE) HSP 1 Score: 267 bits (683), Expect = 9.290e-71 Identity = 197/315 (62.54%), Postives = 207/315 (65.71%), Query Frame = 3
Query: 16545 ATGAEGAAEAEGGERGMVCPPGMDPEVFAQLPAEMQQEVVREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRAREGAXXXXXXXXXXXXXXXXADPSRAAEMDNASIVATLPPEVRREVLLSADDTLLGTLPPNLVAEAMVLRERIIPHQAELQAAQAAQAAIYSGGVRVG-------------------GXXXXXXXXXXRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAEAKNAHEGEWKLEADPKGSSNTRPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVR 17432
A GA G G+VCPPGMDP+VFAQLP +MQQEVVREHRST+GSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRR RE ADPSRA+EMDNAS VATLPPE+RREVLLSADD LL TLPP+LVAEAMV+RERI PHQA AQAA Y+ GVR G G XXXX X R A +N HEGEWKLEADPKGS T PQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHP VR
Sbjct: 494 AAGAXXXXXXXGTGGGLVCPPGMDPDVFAQLPPDMQQEVVREHRSTVGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNAGGP----------ADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERI-PHQA-------AQAAGYASGVRAGAXXXXXXXXXXXXXXSAARGSSGAQTXXXXXXXTNVASAAQAIGGWPCVENCCVCKYIGAARQA-LRNTHEGEWKLEADPKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVR 789
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: D7G2U4_ECTSI (DUF908 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U4_ECTSI) HSP 1 Score: 220 bits (560), Expect = 6.980e-60 Identity = 126/167 (75.45%), Postives = 132/167 (79.04%), Query Frame = 1
Query: 427 CCLKFLAVLMRNCVNKHIFSSSEHLRALLAAGDDEVAETALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKVVSAELMTLSGGWGGRGQGLGLLACVTGEVEGEAKVGRAAGERKLAQTAEPDPSSAATGFSGXXXXXXXXXXXXXENESNRAPSPGGYTGSRTIFV 927
CCL FLAVLMR+CVNKH+FSS+EHLR+LLAAGDD VAE+ALRCLMLLTVPPLLHRHQQPELHSMCSIHKDK VSAELMTLSGGWGGRGQGLGLLACVTG VEGEAK + A XXXXXXXXXX E ESNRAPSPGGYT RTIFV
Sbjct: 128 CCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAK----GTDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXREKEEESNRAPSPGGYTRFRTIFV 290
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: A0A6H5K1Z7_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z7_9PHAE) HSP 1 Score: 223 bits (568), Expect = 2.540e-54 Identity = 171/431 (39.68%), Postives = 182/431 (42.23%), Query Frame = 3
Query: 17790 ESEEVDFPPTRLLGPASDSTAQPTFAGSGSGSGAKRREEGGDGGEEGWREIHPVVARRGLDFLWYLCKTSFRVTYDMLTVGP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HARLRLLCSVLRLEACSDSSFQRVGTVVSNLSKVPENRMTLLKELVSVAKSLGAVSTHDLQSLGQQLDVAKRDAIARHTAAQEKEGEEKDAH-----TTSRAAGKGKXXXXXXXXXARPPGRTGLPPIVVNLNSSSSELKLLRVLQTLVNLSGKDT 18488
ESEEVDFPP RLLGPASDSTAQPTFA A+ EG D ++GW+E+HP+VARRGLDFLWYLCK SFRVTYD+LTVGP H RLRLLCSVLRLEACSD+SFQRVGTVVSNLSKVPENRM LLKELVSVAKSLGAVSTHDLQSL QQLDVAKRDA+AR A T GKGK R GR G+PP+VVNLNSSSSELKLLRVLQTLVNLSG DT
Sbjct: 55 ESEEVDFPPRRLLGPASDSTAQPTFAA------ARTGGEGDD--DDGWQEVHPLVARRGLDFLWYLCKNSFRVTYDVLTVGPAGGGGDAVAKGKGRREGGSTKGKGKLIEAMDVAGGGCCYDSGAGATSGGGAAAIRPDGVLLEQLMDLLDRPLYTMSGPDLDELLQLIEVLVAPLANLKETPRPAVEEAPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAGAGAATATSEKYEWVKVPAPVVQHERLRLLCSVLRLEACSDNSFQRVGTVVSNLSKVPENRMILLKELVSVAKSLGAVSTHDLQSLEQQLDVAKRDAMARAAAQXXXXXXXXXXXXXAPMTLPVVKGKGKAPAHEGSGGGRSGGRAGIPPVVVNLNSSSSELKLLRVLQTLVNLSGNDT 477
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.670e-43 Identity = 175/614 (28.50%), Postives = 268/614 (43.65%), Query Frame = 1
Query: 421 VLCCLKFLAVLMRNCVNKHIFSSSEHLRALLAAGDDEVAETALRCLMLLTVPPLLHRHQQPELHSMCS-IHKDKVVSAELMT-LSGGWGGRGQGLGLLACVTGE--VEGEAKVGRAAGERKLAQTAEPDPSSAATGFSGXXXXXXXXXXXXXENESN----RAPSPGGYTGSRTIFVVTIRGGERCPVDVGDEDE---------------TSAAMFRRLTKENPDV---PKRRLFSLLARVRRALAWRGGLEARRNAVRRRIMALTALVYCHPSQEALMAYIGIQPELVQELVDLVRVRTDQSAQMT--------------------------VPLDISVLAVHCLAALVHTRSGGS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSLFIMPEQDVAAAAVGAVGSGGNRGRTGVDSGVVESKSYEPGDARSSAPPRPDAALSLGMAFVEAAGVQTKGREDTGGXXXXXETAGIDEGRRGGEGADRNPLVRSTELSQMDQLRWVEAIFSLVWAVVSVQHGAAAMTECGLIPALLNIVQLNMDGQGFGGMGKPFHR----------RYVVSQAVQIIETAVVNNAAALSAFRELGAAEVLASAFSTEV 2073
+L LKFL+ L+ N NK +F+S E L LLAA DD +A +L L L +PP LH+ Q PE+ S +H K S + +T L+ GWG RG GLGL AC + V G+ + + AGE + + G + E ES+ P+ S +F T++ + G + + ++A +F + ++ V P RLF LLA +R ++ +R A+ RR+ AL +++ +PSQE + Y QPEL ELVDL+R A VP I LA+ L AL R GG+ SL ARH+++ ELG+ +GQY GLLP L+R+ ++SL + ++S + S E ++A + +G+AF+EA T + R +L + L +++++ +L A+VS G +++TECGL+PALLN V ++ + M R++ +QAVQI+E A+V ++ ALSAF L EVL + S EV
Sbjct: 140 ILVILKFLSGLLTNSSNKSVFNSVEELVDLLAAADDNIASASLETLCALAMPPSLHKQQVPEIQQHSSALHISKTTSHKRLTALARGWGTRGSGLGLYACAVSDDSVFGQGSLPQQAGELNFSFFRDKAYEENRKGEN--------------EEESSLVHVNLPANSFTEDSEMMFEATLKNSDESDDSTGSKQKRRRVALPMKVDRTIRSTADLFFQCLRQAGGVERIPADRLFPLLADIRLTRSFHCQ-ASRVAAIERRLRALITILHANPSQEVMSGYFQAQPELCVELVDLLRPTVSSGAVSASSAAPKSSKIPRQNRDHIVTLSNSPIVPYQIRELALQSLTALAARREGGNGSLTGFARHSNILTELGVGKGQYLGLLPTLIRYSLASLGSLVSTPSCRD---------------IESNETMASSIEKSKVDATA-------MDIGLAFIEATSTPT--------------------------------VPRFEQLEKA--LLFMDSVLTLTSAIVSTPSGTSSLTECGLVPALLNTVSIDAEVASMKIMPDSSSESEIFRIQSLLRFITAQAVQILEGAIVTHSNALSAFHNLKGVEVLTARLSKEV 682
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC) HSP 1 Score: 168 bits (426), Expect = 3.630e-37 Identity = 175/604 (28.97%), Postives = 259/604 (42.88%), Query Frame = 1
Query: 433 LKFLAVLMRNCVNKHIFSSSEHLRALLAAGDDEVAETALRCLMLLTVPPLLHRHQQPELHS-MCSIHKDKVVS-AELMTLSGGWGGRGQGLGLLACVTGE--VEGEAKVGRAAGERKLAQTAEPDPSSAATGFSGXXXXXXXXXXXXXENESNRAPSPGGYTGSRTIFVVTIRGGERCPVDVGDEDETSAAMFRRLTKENPD--------------VPKRRLFSLLARVRRALAWRGGLEARRNAVRRRIMALTALVYCHPSQEALMAYIGIQPELVQELVDLVRVRTDQ-------------------------SAQMTVPLDISVLAVHCLAALVHTRSGGS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVSSLFIMPEQDVAAAAVGAVGSGGNRGRTGVDSGVVESKSYEPGDARSSAPPRPDAALSLGMAFVEAAGVQTKGREDTGGXXXXXETAGIDEGRRGGEGADRNPLVRSTELSQMDQ-LRWVEAIFSLVWAVVSVQHGAAAMTECGLIPALLNIVQLNMDG-------QGFGGMGKPFHR-----RYVVSQAVQIIETAVVNNAAALSAFRELGAAEVLASAFSTEV 2073
L+FL L+RN +K IF+S+E L LLAA DDE ++ AL L+ L++PP LH+ Q PE+ ++H K+ S + L ++ GWG R GLGL + + + V G+ + AG + + + NES+ GS I + + D + + R+ TK + +P RLF LLA +R A ++ AR AV RR+ ALT +++ HPSQE + Y QPEL E+VDL+R S+ VP I +LAV LAALV R G + +L AR + V ELGI +G Y GLLP L+R+ ++SL + + + E + + DA L +GMAFVEA PL + Q+++ L +V+ + +L +VS G AA+T+CGLIPALL V ++D + R R+V++QAVQI+E A+V + AL+AF +L EVL+ S E+
Sbjct: 126 LRFLEGLLRNSTSKSIFNSAEELVDLLAAADDETSDLALTALLALSLPPALHKQQAPEVQQHTTTLHNAKMPSHSRLTAIARGWGTRAMGLGLWSVIKADDSVHGQGSLPGEAGRLSVCYYSRESQNEV---------NEESQMVRIYLNESDIMVG-----GSAEISMDSTSDALTAESDQVSKKRRIGKIPRKETKSTAELYYLVLERAGGMDKIPSDRLFPLLADIRLARSFHSQ-AARIGAVERRLRALTTILHAHPSQEVMNGYFQAQPELCVEIVDLLRPTVSSANIAAASGRATETNSPLQRDAITCLSSCQPVPYTIRMLAVESLAALVARRDGSTGALSGSARLSTVLAELGIGKGYYLGLLPTLLRYSLASLDSPGHESI----------------------LPEIEPEDLDDATM---------LDVGMAFVEAT---------------------------------MEPLP--PRIVQVERTLEFVDNLLTLTSTIVSTPTGTAALTDCGLIPALLATVAHDLDRTIQRLLPDSSNCSTQEILRVYSLLRFVLAQAVQILEGAIVTHGNALTAFHDLRGVEVLSGRLSGEI 648 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.17.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig147.17.2 >prot_P-littoralis_Contig147.17.2 ID=prot_P-littoralis_Contig147.17.2|Name=mRNA_P-littoralis_Contig147.17.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2414bp MLHERCLMQQYVANSGQLLESALSRPENAKSFADAGGDEVLLSMFSLAVPback to top mRNA from alignment at P-littoralis_Contig147:56740..134200+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig147.17.2 ID=mRNA_P-littoralis_Contig147.17.2|Name=mRNA_P-littoralis_Contig147.17.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=77461bp|location=Sequence derived from alignment at P-littoralis_Contig147:56740..134200+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig147:56740..134200+ >mRNA_P-littoralis_Contig147.17.2 ID=mRNA_P-littoralis_Contig147.17.2|Name=mRNA_P-littoralis_Contig147.17.2|organism=Pylaiella littoralis U1_48|type=CDS|length=7242bp|location=Sequence derived from alignment at P-littoralis_Contig147:56740..134200+ (Pylaiella littoralis U1_48)back to top |