mRNA_P-littoralis_Contig1468.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 202 bits (513), Expect = 9.040e-60 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 1
Query: 139 ILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 516
ILEHRF +RAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSG+DF SDYR++IMLAV++AE AENVRARSRNS AVLCPRYI+VEPL+A PVVEAPVPAA G +T+VNPYA SK
Sbjct: 239 ILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVEAPVPAAQGSSTIVNPYASSK 364
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 194 bits (492), Expect = 6.990e-53 Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 157 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPVPAATGPATVVNPYAPSK 516
AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYR +IMLAV++A AENVR+RSRNS AVLCPRYI+VEPL+A PVVE VPAA G +T+VNPYA SK
Sbjct: 917 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVETSVPAAQGSSTIVNPYASSK 1036
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.150e-37 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 34 TPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITV 426
TP + + A ++ H TPS S +++E RGA RQRD +EHRF H R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V
Sbjct: 33 TPGKDSGAPRKQAHPTPSWSHRSFESGRGASRQRDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSV 163
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 121 bits (304), Expect = 9.960e-28 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 136 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVE 456
D++EH F H+R GLG+ RNPTAAQAKER RGD+ RGLHG RAN+NRNAR G DF S YRA++ML V E E + +RAR+++S AVL P YI+V A PV +
Sbjct: 660 DVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVAD 766
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 102 bits (255), Expect = 4.970e-24 Identity = 63/122 (51.64%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 163 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEA-----PVPAATGPATVV-NPYAP 510
+R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G DF S R +I+L V++ E + +RA SRN + AV+ RY++V A P VE PA+ G VV N YAP
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSYAP 122
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.230e-23 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 136 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVV 453
DI EHR+ H+ GLG+ NPT A+AKER+ RGDL R LHG SRA N+NAR G+DF S R +I+L V++AE + +RA S+N + AV+ PRYI+++ A PVV
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVV 635
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 4.480e-22 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 163 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVE 429
+R LG+ NP AAQAKER+ RGDL R LHG SRAN N+NAR G+DF S R +IML V++AE + +RA SRN AV+ PRYI+++
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISID 89
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.850e-19 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 136 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRN--ARSGDDFNVSDYRAK--IMLAVSEAETAENVRARSRNSSVAVLCPRYITV 426
DI EHRF+HIRA LGT RNPTA +AK+RS GDL R +G R N +RN ARSG DF K I+LAV++ ET + VRA RN+ VLCPRY+ +
Sbjct: 180 DICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYMDI 280
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5KZP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP5_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 8.650e-17 Identity = 66/178 (37.08%), Postives = 92/178 (51.69%), Query Frame = 1
Query: 34 TPDRTASAGNQRRHTTPSLSTQAW-------EESRGAPRQRDILEHRFAHIRAGL---GTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVRARSRNSSVAVLCPRYITVEPLSAPPVVEAPV-----PAATGPATVV-NPYAPSKV 519
TP + + A +R H TPS S +++ SRG P +RA + P +++ DLNRGLHGGSRAN NR +R G+DF S R +I+L V++ E + +RA SRN + AV+ PRY++V A P VE PA+ G VV NPYAP ++
Sbjct: 25 TPGKDSGAPRKRAHPTPSWSHRSFASSXSFESRSRGTP------------VRAHAPRPSVAQKPDGYESEGTGSTRDLNRGLHGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKPRADPTVEGSASQESTPASAGQIPVVFNPYAPREI 190
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.720e-11 Identity = 40/52 (76.92%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1 GAGLPMQGSTRTPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRDILEHRF 156
GAGLPMQ ST TPDR AGNQRRHTTPS STQAWEESRGA RQR+ L F
Sbjct: 37 GAGLPMQRSTHTPDRPTIAGNQRRHTTPSPSTQAWEESRGARRQRENLADIF 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1468.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1468.2.1 >prot_P-littoralis_Contig1468.2.1 ID=prot_P-littoralis_Contig1468.2.1|Name=mRNA_P-littoralis_Contig1468.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=191bp MQGSTRTPDRTASAGNQRRHTTPSLSTQAWEESRGAPRQRDILEHRFAHIback to top mRNA from alignment at P-littoralis_Contig1468:3527..4795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1468.2.1 ID=mRNA_P-littoralis_Contig1468.2.1|Name=mRNA_P-littoralis_Contig1468.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1269bp|location=Sequence derived from alignment at P-littoralis_Contig1468:3527..4795+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1468:3527..4795+ >mRNA_P-littoralis_Contig1468.2.1 ID=mRNA_P-littoralis_Contig1468.2.1|Name=mRNA_P-littoralis_Contig1468.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=573bp|location=Sequence derived from alignment at P-littoralis_Contig1468:3527..4795+ (Pylaiella littoralis U1_48)back to top |