prot_P-littoralis_Contig1462.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1462.2.1
Unique Nameprot_P-littoralis_Contig1462.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length109
Homology
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BLAST of mRNA_P-littoralis_Contig1462.2.1 vs. uniprot
Match: A0A6H5KHU9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHU9_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.980e-5
Identity = 36/99 (36.36%), Postives = 46/99 (46.46%), Query Frame = 0 
Query:   10 PEQEPLTRRAIRELAPGRATEGMADPRRMGRTRSSTGHQAPSPLPQLAEAPPESDDDDDLSGQMGLVSMMDKECLLAMLSTHAAVDSRR------GVGE 102
            P   PL+  A+R+L PG+ TEGM  PR  GRTRS T H                          GL+SM+DK  L++ML    AV+  R      G+GE
Sbjct:  524 PALPPLSAHAMRQLRPGKKTEGMKYPRLPGRTRSGTKHST------------------------GLISMLDKNTLVSMLEAQRAVEEERREPGGAGIGE 598
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1462.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHU9_9PHAE3.980e-536.36Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1462contigP-littoralis_Contig1462:781..1107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1462.2.1mRNA_P-littoralis_Contig1462.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1462 781..1107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1462.2.1 ID=prot_P-littoralis_Contig1462.2.1|Name=mRNA_P-littoralis_Contig1462.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp
SAAPAAAANPEQEPLTRRAIRELAPGRATEGMADPRRMGRTRSSTGHQAP
SPLPQLAEAPPESDDDDDLSGQMGLVSMMDKECLLAMLSTHAAVDSRRGV
GEFGGNKES
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