mRNA_P-littoralis_Contig1461.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1461.4.1
Unique NamemRNA_P-littoralis_Contig1461.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A2D8LHF1_9FLAO (ABC transporter ATP-binding protein n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LHF1_9FLAO)

HSP 1 Score: 453 bits (1166), Expect = 2.580e-152
Identity = 273/463 (58.96%), Postives = 304/463 (65.66%), Query Frame = 3
Query:   42 KKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHTR*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*KRSNMKLA*AWFLSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KC-----------IERI----FQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            +KNAVEVIH ISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKK STISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVK +     +K      K    +   + +  +     +   +       +   P     +  +K+     K    +   +       L    +    +    +  +++     +  K P+    K              + L S      RL  L  + S   +  K I  T      +            +E +    F   G   +KRSVRAVDGVSF LFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIA+
Sbjct:   19 RKNAVEVIHSISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKSSTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKRETLQLFEKVKLPRPKDIYNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILELLKALQQETGMSMVFISHDLSLVSEIADRVAVIYQGDIVEVGTSHQIFKMPKATYTK--------------ALLNSRPTLEKRLEQLPTIASLANNTFKPIEVTPQQRALRHKKLYTQPPLLRVENVSKEYFSNVGLFQKKRSVRAVDGVSFALFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A6G6GNA1_9FLAO (ABC transporter ATP-binding protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GNA1_9FLAO)

HSP 1 Score: 351 bits (900), Expect = 2.900e-112
Identity = 223/467 (47.75%), Postives = 286/467 (61.24%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*KRSNMKLA*AW-FLSRTI-LVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGI--------------KIIHTTSVTTC*KCIER-IFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            NKK   EV+H ISL I  NEIVGIVGESGSGKSVTSLA+MGLLPKK S +SG I F+G+ +  + EKEF+ LRGN ISMIFQEPMSALNPSL+CGFQV EILKQHT LS+SEVK++     +K   L R      ++  + +  +     +   +       +   P     +  +K+     K        +  F+S  + LV      +V+    K ++++     +  K P+ +  K  L           +  PS     TRL  L  + S                    K ++T       K + +  +   G   +KR+V+AV+ VSF++F GETLGLVGESGCGKSTLGKTILQLE AT+G+I+YRGKD+T LSK+++R LRKEIQLIFQDPYSSLNPRI IGEAL EPM VH+I SS ++RK+R L LL KVGLD+TY+ RYPHELSGGQRQRVGIA+
Sbjct:   18 NKKKKTEVVHEISLEILSNEIVGIVGESGSGKSVTSLAVMGLLPKKTSNLSGNIIFQGENLLTIKEKEFQKLRGNAISMIFQEPMSALNPSLQCGFQVAEILKQHTTLSTSEVKKETLQLFEKVK-LPRPNEIYNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILELLKELQKDTGMSMIFISHDLSLVSEIADRVVVM--YKGSIVETGSVYQIFKQPKAQYTKALL-----------NSRPSLR---TRLETLPTIASLADKSFVAKEVTPQQRALKHKNLYTKEPLLTVKNVSKEYYSNAGIFQKKRTVKAVNQVSFSVFPGETLGLVGESGCGKSTLGKTILQLERATKGSIYYRGKDLTSLSKKDVRHLRKEIQLIFQDPYSSLNPRILIGEALMEPMEVHNIESSPKKRKQRVLALLTKVGLDETYFSRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A370QJR0_9FLAO (Peptide/nickel transport system ATP-binding protein n=1 Tax=Marinirhabdus gelatinilytica TaxID=1703343 RepID=A0A370QJR0_9FLAO)

HSP 1 Score: 350 bits (899), Expect = 4.090e-112
Identity = 230/472 (48.73%), Postives = 284/472 (60.17%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHTR*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*KRSNMKLA*AW-FLSRT----------ILVWFRK*PIVLR*CTKETLLKW--APRTRFLKCPRL----RIPKLYLILALR*KN-D*NSCLPS-----HHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            NKK  VEVIH IS  IS NEIVGIVGESGSGKSVTSLA+MGLLPKK S I G +TF+ K I  L EKEF+ +RGN+ISMIFQEPMSALNPSL CGFQV EIL+ HT L++SE K++     +K      K    +   + +  +     +   +       +   P     +  +K+     K    +   +  F+S            +LV ++    V+   T   + K   A  TR L   R     R+ +L  I +L       N   PS     H    T+  LLK++  S                    +  + + G  ++K +V AV+ VSF++FEGETLGLVGESGCGKSTLGKTILQLE AT GAI+YRGKD+TKLSK EIR LRKEIQLIFQDPYSSLNPR PIGEAL EPM VHSI +SAR+RK+R   LL +VGLD TY++RYPHELSGGQRQRVGIA+
Sbjct:   18 NKKQKVEVIHDISFKISENEIVGIVGESGSGKSVTSLAIMGLLPKKTSFIEGRLTFQEKNILTLKEKEFQKIRGNEISMIFQEPMSALNPSLSCGFQVAEILRNHTSLAASEAKKETLQLFEKVKLPRPKEIYKSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILQLLKELQQETGMSLIFISHDLSLVSEIVDRVLVMYK--GEVVEEGTVSQIFKHPKADYTRALLASRPTLDERLEQLPTIASLADGTFTKNVVTPSQRAFQHKKIYTQEPLLKVMNVS--------------------KEYYSKGGLFTKKHTVHAVNDVSFSVFEGETLGLVGESGCGKSTLGKTILQLEKATAGAIYYRGKDLTKLSKAEIRRLRKEIQLIFQDPYSSLNPRTPIGEALMEPMEVHSIETSARKRKKRVQELLIRVGLDKTYFNRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A2E2W7K6_9FLAO (ABC transporter ATP-binding protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2W7K6_9FLAO)

HSP 1 Score: 349 bits (895), Expect = 1.670e-111
Identity = 221/466 (47.42%), Postives = 283/466 (60.73%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*----SC*KRSNMKLA*AWFLSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KCIER------------IFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            +KK  V VIH IS  ++ NEIVGIVGESGSGKSVTSLA+MGLLPKK S +SGT+ F+ + I  L EK F+ +RGN+ISMIFQEPMSALNPSL CGFQV EILK HT L SS +K++     +K   L R      ++  + +  +     +   +       +   P     +  +K+         K +NM L    F+S  + +       VL    K  L++    T+  K P+    K   +LA R         P+   ++ +L  +  L  +    + +  +       K   R             + + G  ++KR+++AVD VSF++FEGETLGLVGESGCGKSTLGKTILQLE  T GAI+YRGKD+TKLS  EIR LRKEIQLIFQDPYSSLNPR+PIGEAL EPM VH I  SA +RK+R L LL +VGLD+TY+HRYPHELSGGQRQRVGIA+
Sbjct:   18 SKKKKVAVIHDISFHVAENEIVGIVGESGSGKSVTSLAVMGLLPKKSSFVSGTLAFQQQNILTLKEKAFQKIRGNEISMIFQEPMSALNPSLTCGFQVAEILKTHTSLGSSAIKKETIQLFEKVK-LPRPNEIYNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILMLLKELQKETNMSLI---FISHDLSLVSEIADRVLV-MYKGNLVEEGTVTQIFKFPKAAYTKA--LLASR---------PTLGERLQQLPTIASLADNSFKKVIVTPSQRAQQHKKLYTRDPLLRIVNVSKTYYSKGGLFTKKRTLKAVDDVSFSVFEGETLGLVGESGCGKSTLGKTILQLEKPTMGAIYYRGKDLTKLSNTEIRKLRKEIQLIFQDPYSSLNPRVPIGEALMEPMNVHRIEPSASKRKQRVLALLTRVGLDNTYFHRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: UPI001F40A4AD (ABC transporter ATP-binding protein n=1 Tax=Aequorivita sp. F47161 TaxID=2874475 RepID=UPI001F40A4AD)

HSP 1 Score: 345 bits (884), Expect = 7.220e-110
Identity = 216/455 (47.47%), Postives = 285/455 (62.64%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*K--RSNMKLA*AWFLSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLIL--ALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KCIERI-FQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            NKK   EV+H IS  +  NEIVGIVGESGSGKSVTSLA+MGLLPKK S +SGTI+FE K +   SE++FR +RG++I+MIFQEPMSALNPSL+CG+QV EIL+ H  ++SSE K++  S  KK   L R      ++  + +  +     +   +       +   P     +  +K+  S  K  +   K+A  +      LV      +V+    K  +++ A  T   K P+    K  L    AL  +      + S   +  +   +K +  + R   K I+T         +E+  F   G  + K  V+AVD VSF +FEGETLGLVGESGCGKSTLGKTILQLE AT G I YRGK++TKLS  EIR+LRKEIQ+IFQDPYSSLNPRI IG+AL EPM VH + +S +ERK+R L+LL++VGLD++Y++RYPHELSGGQRQRVGIA+
Sbjct:   18 NKKGFKEVLHRISFEVFKNEIVGIVGESGSGKSVTSLAIMGLLPKKQSVLSGTISFEEKNLLKTSERDFRKIRGSEIAMIFQEPMSALNPSLKCGYQVSEILQLHLNMNSSEAKKETISLFKKVK-LPRPDEIFNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEIISLLKSIQQETKMAMLFISHDLSLVSEIADSVVVM--YKGNIVENATTTEIFKTPKAEYTKALLASRPALNVRLAKLPTIASISDESFKAREVKPVERAKRH--KNIYTQKPILEVDNLEKYYFSNVGLFARKEIVKAVDNVSFAVFEGETLGLVGESGCGKSTLGKTILQLEKATSGNIKYRGKELTKLSTTEIRNLRKEIQIIFQDPYSSLNPRIMIGQALMEPMEVHHLGNSKKERKKRVLSLLDRVGLDESYFYRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A2D4XLA5_9FLAO (ABC transporter ATP-binding protein n=5 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2D4XLA5_9FLAO)

HSP 1 Score: 341 bits (874), Expect = 2.270e-108
Identity = 212/468 (45.30%), Postives = 290/468 (61.97%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*K--RSNMKLA*AWF---------LSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKC-----PRL--RIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            NKK  VEV+H IS  +  NEIVGIVGESGSGKSVTSL++MGLLPKK++ +SG + FE K +  ++E EFR +RG DI+MIFQEPMSALNPSL+CGFQV EIL+ H K++ SE K++  S  +K   L R      ++  + +  +     +   +       +   P     +  +K+  S  K  +   K+A  +          ++  ++V ++    ++   T E + K  P+  + K      P L  R+ KL  I ++  K    S  P     + R    K + +  +  ++I++              F   G  S+   V+AVD +SFT+FEGETLGLVGESGCGKSTLG+TILQLE AT G+I YRGK++T+LSK EIR+LRKEIQ+IFQDPYSSLNPR+ IG+AL EPM VH +  SA+ERK   L+LLE+VGLD++Y++RYPHELSGGQRQRVGIA+
Sbjct:   18 NKKKLVEVLHNISFDVFENEIVGIVGESGSGKSVTSLSIMGLLPKKLANLSGNVIFEEKVLLQITETEFRNIRGKDIAMIFQEPMSALNPSLKCGFQVAEILRLHLKMNVSEAKKETISLFEKVK-LPRPAEIYNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILSLLKSIQQETKMAMLFISHDLSLVSEIADRVVVMYK--GDIIENATTEEIFK-NPKAAYTKALLASRPSLNVRLAKLPTIASIADK----SFKPREVKPVERAKRHKHIYTK-KPILEIVNLEKY---------YFSNVGMFSKAEVVKAVDDISFTVFEGETLGLVGESGCGKSTLGRTILQLEKATSGSIKYRGKELTRLSKGEIRNLRKEIQIIFQDPYSSLNPRLMIGQALMEPMEVHGLGKSAKERKESVLSLLERVGLDESYFYRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A330MF64_9FLAO (Glutathione import ATP-binding protein GsiA n=6 Tax=Aequorivita TaxID=153265 RepID=A0A330MF64_9FLAO)

HSP 1 Score: 340 bits (872), Expect = 4.520e-108
Identity = 212/467 (45.40%), Postives = 290/467 (62.10%), Query Frame = 3
Query:   39 NKKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHTR*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*K--RSNMKLA*AWFLSRTI---------LVWFRK*PIVLR*CTKETLLKWAPRTRFLKC-----PRL--RIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIKIIHTTSVTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            NK++++EV+H IS  +  NEI+GIVGESGSGKSVTSLA+MGL PKK S +SG I FE K +  ++EKEF+ +RG +I+MIFQEPMSALNPSL+CGFQV EI++ H K+++SE K++     +K      K    +   + +  +     +   +       +   P     +  +K+  S  K  +   K++   F+S  +         +V   K  IV +  T E      P+  + K      P L  R+ KL  I ++  K    S +P     + R    K + +  +  ++II+           ++     G  S+K  V+AVD VSF++FEGETLGLVGESGCGKSTLG+TILQLE AT G+I YRGK++T LSK EIR+LRKEIQ+IFQDPYSSLNPR+ IG+AL EPM VHS+  S +ERK R L+LLE+VGLD++Y++RYPHELSGGQRQRVGIA+
Sbjct:   18 NKESSIEVVHSISFEVFRNEILGIVGESGSGKSVTSLAIMGLFPKKQSNLSGNILFEEKNLLKVNEKEFQKIRGKEIAMIFQEPMSALNPSLKCGFQVSEIIRLHLKMNASEAKKETILLFEKVKLPRPKEIFNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEIISLLKSIQEETKMS-MLFISHDLSLVSEIADKVVVMYKGEIVEKATTSEIFK--TPKAEYTKALLESRPSLNVRLAKLPTIASIADK----SFVPREVKPVERAKRHKNIYTQ-KPILEIINLE---------KQYLSNVGIFSKKEIVKAVDDVSFSVFEGETLGLVGESGCGKSTLGRTILQLEKATAGSIKYRGKELTTLSKSEIRNLRKEIQIIFQDPYSSLNPRLMIGQALMEPMEVHSLGKSKKERKERVLSLLERVGLDESYFYRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: A0A1M6DPC2_9FLAO (Peptide/nickel transport system ATP-binding protein n=1 Tax=Aequorivita viscosa TaxID=797419 RepID=A0A1M6DPC2_9FLAO)

HSP 1 Score: 340 bits (871), Expect = 6.380e-108
Identity = 210/452 (46.46%), Postives = 281/452 (62.17%), Query Frame = 3
Query:   42 KKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*KRSNMKLA*AWFLSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLILALR*KND*N-SCLPSHHWQITRLNLLKLLRSSGRSGI-KIIHT-TSVTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            K  A EV+H IS  +  NEI+GIVGESGSGKSVTSL++MGLLPKK +  SG I FE K++    EKEFRA+RG +I+MIFQEPMSALNPSL+CG QV EILK H KL+SSE K++  S  +K   L R      ++  + +  +     +   +       +   P     +  +K+  S  K    +   A       L    +    +    K  +++ A      K P+    K   +L  R   D   + LP+      +  + K ++ + R+   K I+T T +       +  +   G  S+  SV+AVD +SF++FEGETLGLVGESGCGKSTLGKTILQLE AT G+I Y+G+++TKL+K EIR+LRKEIQ+IFQDPYSSLNPR+PIGEAL EPM VH +  S ++RK +AL LL++VGLDD+Y++RYPHELSGGQRQRVGIA+
Sbjct:   19 KGKATEVLHTISFDVHENEILGIVGESGSGKSVTSLSIMGLLPKKTAHTSGRILFENKDLLKTDEKEFRAIRGKEIAMIFQEPMSALNPSLKCGKQVSEILKLHLKLNSSEAKKETISLFEKVK-LPRPNEIYNSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEIMSLLKSIQQETKMAMLFISHDLNLVSEIADRVMVMYKGDVVENATTFEIFKTPKAEYTKA--LLEARPALDVRLATLPTIASIADKSFVAKEIKPTERAKKHKQIYTQTPILEISNLKKYYYSSMGIFSKSESVKAVDDISFSVFEGETLGLVGESGCGKSTLGKTILQLEKATSGSIKYKGRELTKLTKTEIRNLRKEIQIIFQDPYSSLNPRLPIGEALMEPMEVHQLGKSRKDRKEKALLLLKRVGLDDSYFNRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: UPI00041E9B71 (ABC transporter ATP-binding protein n=1 Tax=Aequorivita capsosiphonis TaxID=487317 RepID=UPI00041E9B71)

HSP 1 Score: 334 bits (856), Expect = 1.120e-105
Identity = 207/463 (44.71%), Postives = 289/463 (62.42%), Query Frame = 3
Query:   42 KKNAVEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHT-R*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*K--RSNMKLA*AWFLSRTILVWFRK*PIVLR*CTKETLLKWAPRTRFLKCPRLRIPKLYLILALR*KND*NSCLPSHHWQITRLNLL----------KLLRSSGRSGI-KIIHTTS-VTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            + +++EV+H IS  +  NEIVGIVGESGSGKSVTSL++MGLLPKK + +SG+I FE K++    E++FR +RG +I+MIFQEPMSALNPSL+CGFQV EIL+ H K+SSSE K++  S  +K   L R      T+  + +  +     +   +       +   P     +  +K+  S  K  +   K+A  +      L+      +V+    K  +++ A      K P+    K   +LA R         PS + ++ +L  +          ++++ + R+   K I+T   +       +      G   +K  V+AVD +SF++FEGETLGLVGESGCGKSTLG+TILQLE A  G+I YRGK++TKLSK+EIR LRKEIQ+IFQDPYSSLNPR+ IG AL EPM VH++  S ++RK RALTLL++VGLD++Y++RYPHELSGGQRQRVGIA+
Sbjct:   19 RNSSIEVLHKISFEVFQNEIVGIVGESGSGKSVTSLSIMGLLPKKQAHLSGSILFEEKDLLKTEEEKFRKIRGKEIAMIFQEPMSALNPSLKCGFQVSEILQLHLKMSSSEAKKETISLFEKVK-LPRPNEIYNTYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEIISLLKSIQQETKMAMLFISHDLSLISEIADRVVVM--YKGDIVETATTEEIFKNPKAEYTKA--LLASR---------PSLNVRLAKLPTIASIADDSFKPRIVKPAERAKRHKQIYTRQPILEVENLAKYYLSNVGIFVKKEVVKAVDNISFSVFEGETLGLVGESGCGKSTLGRTILQLEKANSGSIKYRGKELTKLSKQEIRGLRKEIQIIFQDPYSSLNPRLMIGPALMEPMEVHNLGKSKKDRKERALTLLDRVGLDESYFYRYPHELSGGQRQRVGIAR 467          
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Match: UPI00193A8A69 (ABC transporter ATP-binding protein n=1 Tax=Luteirhabdus pelagi TaxID=2792783 RepID=UPI00193A8A69)

HSP 1 Score: 333 bits (854), Expect = 2.230e-105
Identity = 212/467 (45.40%), Postives = 281/467 (60.17%), Query Frame = 3
Query:   42 KKNA-VEVIHGISLTISPNEIVGIVGESGSGKSVTSLALMGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALNPSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*NSLGRKTSTIATHTR*AADRCSGS*LPWQLPVNLNC*LQTNPLLH*MLPFRKKF*SC*KR----SNMKLA*AWFLSRT----------ILVWFRK*PIVLR*CTKETLLKW--APRTRFLKCPRLRIPKLYLILALR*KND*NSCLPSHHWQITRLNLLKLLRSSGRSGIK--IIHTTSVTTC*KCIERIFQQCGCVSEKRSVRAVDGVSFTLFEGETLGLVGESGCGKSTLGKTILQLEHATQGAIWYRGKDITKLSKREIRSLRKEIQLIFQDPYSSLNPRIPIGEALTEPMLVHSIASSARERKRRALTLLEKVGLDDTYYHRYPHELSGGQRQRVGIAK 1385
            KKNA VEVIH +S T++ NEI+GIVGESGSGKSVTSLA+MGLLPKK + I G I F+ K++    EKE+R +RGNDI+MIFQEPMSALNPSL+CG+QV EIL+ H KLS SE K++  S  +K      K    +   + +  +     +   +       +   P     +  +K+     K     +NM +    F+S            ++V +R   +     T + + K   A  T+ L   R  + K    L         + L    +Q + +   +  +       K  ++   +V+      +  +   G  S+K +V+AV+ VSF +FEGETLGLVGESGCGKSTLGKTILQLE AT G I Y+GKD+T L   EIRSLRKEIQLIFQDPYSSLNPRI IGEA+ EPM VH I +S +ERK++ L LLE+VGLD ++++RYPHELSGGQRQRVGIA+
Sbjct:   18 KKNARVEVIHTVSFTVAKNEILGIVGESGSGKSVTSLAVMGLLPKKTAHIEGEIVFDSKDLLQAPEKEYRTIRGNDIAMIFQEPMSALNPSLKCGYQVAEILQWHKKLSKSEAKKETLSLFEKVKLPRPKQLFKSYPHQISGGQMQRVMIAMAIACKPKLLIADEPTTALDVTVQKEILQLLKELQQETNMSML---FISHDLNLVSEIADRVMVMYRGDKVEED--TVQNIFKHPKAEYTKALLASRPTLGKRLKTLPTI------AALSEGSFQASEVTAQQRAKRHRELYTKPPLLEVINVS------KEYYSNAGLFSKKETVKAVNDVSFAVFEGETLGLVGESGCGKSTLGKTILQLETATAGTIRYKGKDLTTLKSSEIRSLRKEIQLIFQDPYSSLNPRIIIGEAIIEPMKVHGIGNSKKERKQKVLELLERVGLDKSFFNRYPHELSGGQRQRVGIAR 467          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1461.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LHF1_9FLAO2.580e-15258.96ABC transporter ATP-binding protein n=3 Tax=Flavob... [more]
A0A6G6GNA1_9FLAO2.900e-11247.75ABC transporter ATP-binding protein n=1 Tax=Flavob... [more]
A0A370QJR0_9FLAO4.090e-11248.73Peptide/nickel transport system ATP-binding protei... [more]
A0A2E2W7K6_9FLAO1.670e-11147.42ABC transporter ATP-binding protein n=1 Tax=Flavob... [more]
UPI001F40A4AD7.220e-11047.47ABC transporter ATP-binding protein n=1 Tax=Aequor... [more]
A0A2D4XLA5_9FLAO2.270e-10845.30ABC transporter ATP-binding protein n=5 Tax=Flavob... [more]
A0A330MF64_9FLAO4.520e-10845.40Glutathione import ATP-binding protein GsiA n=6 Ta... [more]
A0A1M6DPC2_9FLAO6.380e-10846.46Peptide/nickel transport system ATP-binding protei... [more]
UPI00041E9B711.120e-10544.71ABC transporter ATP-binding protein n=1 Tax=Aequor... [more]
UPI00193A8A692.230e-10545.40ABC transporter ATP-binding protein n=1 Tax=Luteir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1461contigP-littoralis_Contig1461:11547..12931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121889.AUDM01000003_gene2267
Preferred namegsiA
PFAMsABC_tran,oligo_HPY
Model size1385
Max annot lvl976|Bacteroidetes
KEGG koko:K02031,ko:K02032
KEGG TC3.A.1.5
KEGG Pathwayko02024,map02024
KEGG ModuleM00239
Hectar predicted targeting categoryother localisation
Exons1
Evalue5e-29
EggNOG OGsCOG1123@1|root,COG4172@2|Bacteria,4NGDP@976|Bacteroidetes,1HYRD@117743|Flavobacteriia,2NURT@237|Flavobacterium
DescriptionBelongs to the ABC transporter superfamily
Cds size255
COG categoryP
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789690.2190068-UTR-P-littoralis_Contig1461:11546..125211680789690.2190068-UTR-P-littoralis_Contig1461:11546..12521Pylaiella littoralis U1_48UTRP-littoralis_Contig1461 11547..12521 -
1680789690.2393105-UTR-P-littoralis_Contig1461:12776..129311680789690.2393105-UTR-P-littoralis_Contig1461:12776..12931Pylaiella littoralis U1_48UTRP-littoralis_Contig1461 12777..12931 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789690.2301157-CDS-P-littoralis_Contig1461:12521..127761680789690.2301157-CDS-P-littoralis_Contig1461:12521..12776Pylaiella littoralis U1_48CDSP-littoralis_Contig1461 12522..12776 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1461.4.1prot_P-littoralis_Contig1461.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1461 12522..12776 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1461.4.1

>prot_P-littoralis_Contig1461.4.1 ID=prot_P-littoralis_Contig1461.4.1|Name=mRNA_P-littoralis_Contig1461.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
MGLLPKKISTISGTITFEGKEITNLSEKEFRALRGNDISMIFQEPMSALN
PSLRCGFQVDEILKQHTKLSSSEVKEKHSSCSKK*
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mRNA from alignment at P-littoralis_Contig1461:11547..12931-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1461.4.1 ID=mRNA_P-littoralis_Contig1461.4.1|Name=mRNA_P-littoralis_Contig1461.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1385bp|location=Sequence derived from alignment at P-littoralis_Contig1461:11547..12931- (Pylaiella littoralis U1_48)
TTTTTATTAGAAATTAAAGATTTGTGTATTTCATTCGGAACAAGAAAAAT GCTGTTGAAGTAATACACGGCATATCCCTTACCATTTCACCCAATGAAAT TGTCGGTATCGTAGGCGAGTCTGGATCTGGAAAATCGGTTACTTCTTTAG CCTTAATGGGCTTGCTTCCCAAAAAAATTAGTACTATCTCAGGTACGATA ACATTTGAAGGAAAAGAAATTACCAACCTTTCTGAAAAAGAATTCCGGGC ATTGCGGGGAAACGACATTTCCATGATCTTCCAAGAACCAATGAGCGCGC TGAACCCATCACTTCGCTGTGGGTTTCAAGTGGATGAAATTTTAAAGCAA CACACAAAATTATCTTCTTCCGAAGTAAAAGAGAAACACTCCAGCTGTTC GAAAAAGTAAAACTCCCTAGGCCGAAAGACATCTACAATAGCTACCCACA CCAGATAAGCGGCGGACAGATGCAGCGGGTCATGATTGCCATGGCAATTG CCTGTAAACCTAAATTGCTGATTGCAGACGAACCCACTACTGCATTAGAT GTTACCGTTCAGAAAGAAATTTTAGAGTTGTTGAAAGCGCTCCAACATGA AACTGGCATGAGCATGGTTTTTATCTCGCACGATCTTAGTTTGGTTTCGG AAATAGCCGATCGTGTTGCGGTGATGTACCAAGGAGACATTGTTGAAGTG GGCACCTCGCACCAGATTTTTAAAATGCCCAAGGCTACGTATACCAAAGC TTTACTTAATTCTCGCCCTACGCTAGAAAAACGATTAGAACAGTTGCCTA CCATCGCATCATTGGCAAATAACACGTTTAAACCTATTGAAGTTACTCCG CAGCAGCGGGCGCTCCGGCATAAAAATTATACACACAACCTCCGTTACTA CGTGTTGAAAATGTATCGAAAGAATATTTCAGCAATGTGGGTGTGTTTCA GAAAAAAGATCAGTACGGGCTGTAGATGGAGTTTCATTCACCTTATTTGA AGGAGAAACACTCGGATTGGTAGGTGAATCTGGCTGCGGAAAATCTACGT TGGGGAAGACCATTCTTCAACTTGAACATGCAACCCAAGGAGCCATTTGG TATCGAGGTAAGGACATCACCAAACTCTCGAAGCGAGAGATCCGATCACT GCGGAAAGAAATTCAGCTTATTTTTCAGGATCCGTACTCGTCTTTAAATC CGCGCATCCCAATCGGCGAAGCACTTACTGAGCCTATGTTGGTGCATTCT ATCGCATCATCGGCTCGTGAAAGAAAGCGAAGAGCATTGACACTTTTGGA AAAAGTAGGCTTAGACGACACTTATTACCATAGATATCCGCATGAACTCT CTGGCGGGCAACGACAACGTGTTGGGATTGCGAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1461:11547..12931-

>mRNA_P-littoralis_Contig1461.4.1 ID=mRNA_P-littoralis_Contig1461.4.1|Name=mRNA_P-littoralis_Contig1461.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=255bp|location=Sequence derived from alignment at P-littoralis_Contig1461:11547..12931- (Pylaiella littoralis U1_48)
ATGGGCTTGCTTCCCAAAAAAATTAGTACTATCTCAGGTACGATAACATT
TGAAGGAAAAGAAATTACCAACCTTTCTGAAAAAGAATTCCGGGCATTGC
GGGGAAACGACATTTCCATGATCTTCCAAGAACCAATGAGCGCGCTGAAC
CCATCACTTCGCTGTGGGTTTCAAGTGGATGAAATTTTAAAGCAACACAC
AAAATTATCTTCTTCCGAAGTAAAAGAGAAACACTCCAGCTGTTCGAAAA
AGTAA
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