mRNA_P-littoralis_Contig146.124.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig146.124.2
Unique NamemRNA_P-littoralis_Contig146.124.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 1.620e-122
Identity = 189/217 (87.10%), Postives = 203/217 (93.55%), Query Frame = 1
Query:   34 TQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            TQ+FLG+AATLIASS+AFVAPMAVRS APA+ SS+LKMSAGSDYVATLPGAPFGDGKIFDPL LSDGA+P DIK WREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISA+YPEFWVFSLLGMAFIEYNTI  A+ETPSAVTGEGGLKEDY PG+LGFDPL +KP+ E  L VM+TKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 TQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 3.300e-119
Identity = 183/215 (85.12%), Postives = 200/215 (93.02%), Query Frame = 1
Query:   40 MFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            MFLGTAATLIASS+AFVAPMAVRS APA+ +S+LKMSAGSDYVATLPGAPFGDGKIFDPL LSDGAEP +IKLWREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEYNTITKAY  PS VTGEGGL+++YSPG+LGFDPL +KPK +  L  MQTKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:    7 MFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 4.290e-111
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 1
Query:   37 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 681
            QMFLGTAA LIASS+AFVAP+AVRS APA+ +S+LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA P DIK WREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISA++PEFW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:    5 QMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 6.330e-105
Identity = 167/221 (75.57%), Postives = 194/221 (87.78%), Query Frame = 1
Query:   22 VATTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            +A ++ MFLGTAATLIASS+AFV PMAVRS APA+ +S+LKMSAG+DY+ATLPGA   +GKIFD L L+DGA+P +IKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI KAY  PS VTGEGGL+++YSPG+LGFDP  IKPK +  L  MQ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 6.940e-90
Identity = 158/216 (73.15%), Postives = 166/216 (76.85%), Query Frame = 1
Query:   37 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            QMF+GTAATLIASS+AFVAPMAVRSV     S  LKMSAGSDYVATLPGAPF DGKIFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 2.390e-88
Identity = 136/161 (84.47%), Postives = 147/161 (91.30%), Query Frame = 1
Query:  202 KIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            +IFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAF+EYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.280e-87
Identity = 185/388 (47.68%), Postives = 197/388 (50.77%), Query Frame = 1
Query:   37 QMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSS-LKMSAGSDYVATLPGAPFGDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            QMF+GTAATLIASS+AFVAP+AVRSVA   PSSS L MSAGSDYVATLPGAPF DGK                                                                                                                                                                           IFDPLGLSDGA P DIK WREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISA++PEFW FSLLGMAFIEYNTI  A++TPSAVTGEGGLKEDY PG+LGFDPL +KP  E  L VM+TKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    5 QMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 3.190e-85
Identity = 133/160 (83.12%), Postives = 143/160 (89.38%), Query Frame = 1
Query:  202 KIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 681
            KIFDPLGL+DGAE  DIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAR+PEFW FSLL +A IEYNTITKAY  PS VTGEGGL+++YSPG+LGFDPL +KP  +  L  MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.760e-80
Identity = 132/222 (59.46%), Postives = 171/222 (77.03%), Query Frame = 1
Query:   19 MVATTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYVATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADILG 684
            ++ T+T   +G A+   AS  AF+ P    +++    S++ +MSAGSDYV+TLPGAPF DGK++DP+GLS  A+PEDIK WREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+AR+P+FW  +LL +A++EY  I   +     VTGEGG++ DY PG+LGFDPLG+ P+ E +L VM+TKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   51 VMVTSTGALVGMASWCFASCEAFIVPTPT-TLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 3.200e-76
Identity = 136/222 (61.26%), Postives = 171/222 (77.03%), Query Frame = 1
Query:   31 TTQMFLGTAATLIASSSAFVAPMAV--RSVAPAAPSSSLKMSAGSDYVATLPGAPFG---DGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITKAYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGRLAMIGIAGMLVQELVNPADIL 681
            T+Q+FLGTAATLIASS+AFVAP+A    S+A  A SS+ KM+AGSDY A+LPGAPFG   +GK FDP GL+   +PE IK WREAE+KHGRV+MLA++G+LV+E +HP FMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+ T S VTG G LK +Y PG+LGFDPLG+ PK  ED  ++Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    3 TSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.124.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI1.620e-12287.10Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI3.300e-11985.12Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI4.290e-11181.86Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI6.330e-10575.57Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE6.940e-9073.15LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI2.390e-8884.47Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE1.280e-8747.68LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI3.190e-8583.13Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G5B4_ECTSI1.760e-8059.46Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI3.200e-7661.26Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:480601..485582 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7Q6
PFAMsChloroa_b-bind
Model size2246
Max annot lvl2759|Eukaryota
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
Exons4
Evalue5.91e-131
EggNOG OGs2BEWM@1|root,2S15M@2759|Eukaryota
DescriptionChlorophyll A-B binding protein
Cds size669
COG categoryU
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.124.2prot_P-littoralis_Contig146.124.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig146 482160..485564 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789690.0328171-UTR-P-littoralis_Contig146:480600..4821591680789690.0328171-UTR-P-littoralis_Contig146:480600..482159Pylaiella littoralis U1_48UTRP-littoralis_Contig146 480601..482159 -
1680789690.0835385-UTR-P-littoralis_Contig146:485564..4855821680789690.0835385-UTR-P-littoralis_Contig146:485564..485582Pylaiella littoralis U1_48UTRP-littoralis_Contig146 485565..485582 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789690.0425255-CDS-P-littoralis_Contig146:482159..4824351680789690.0425255-CDS-P-littoralis_Contig146:482159..482435Pylaiella littoralis U1_48CDSP-littoralis_Contig146 482160..482435 -
1680789690.0517373-CDS-P-littoralis_Contig146:484547..4846311680789690.0517373-CDS-P-littoralis_Contig146:484547..484631Pylaiella littoralis U1_48CDSP-littoralis_Contig146 484548..484631 -
1680789690.0630858-CDS-P-littoralis_Contig146:484839..4849621680789690.0630858-CDS-P-littoralis_Contig146:484839..484962Pylaiella littoralis U1_48CDSP-littoralis_Contig146 484840..484962 -
1680789690.0737896-CDS-P-littoralis_Contig146:485378..4855641680789690.0737896-CDS-P-littoralis_Contig146:485378..485564Pylaiella littoralis U1_48CDSP-littoralis_Contig146 485379..485564 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig146.124.2

>prot_P-littoralis_Contig146.124.2 ID=prot_P-littoralis_Contig146.124.2|Name=mRNA_P-littoralis_Contig146.124.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MVATTTQMFLGTAATLIASSSAFVAPMAVRSVAPAAPSSSLKMSAGSDYV
ATLPGAPFGDGKIFDPLGLSDGAEPEDIKLWREAEIKHGRVAMLASLGVL
VAEEYHPFFMGPDYIGPAVDHFQEISARYPEFWVFSLLGMAFIEYNTITK
AYETPSAVTGEGGLKEDYSPGNLGFDPLGIKPKTEEDLAVMQTKELNNGR
LAMIGIAGMLVQELVNPADILG*
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mRNA from alignment at P-littoralis_Contig146:480601..485582-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig146.124.2 ID=mRNA_P-littoralis_Contig146.124.2|Name=mRNA_P-littoralis_Contig146.124.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4982bp|location=Sequence derived from alignment at P-littoralis_Contig146:480601..485582- (Pylaiella littoralis U1_48)
GCACCACCCTTGAGCAAGATGGTTGCCACCACCACCCAGATGTTCCTCGG CACCGCCGCCACCCTGATCGCCTCGTCCTCGGCGTTCGTCGCACCGATGG CAGTGCGATCCGTTGCGCCTGCCGCACCCTCATCGAGCCTCAAGATGAGC GCCGGATCGGACTACGTCGCAACCCTCCCCGGCGCTCCCTTCGGCGACGG CAAGGTGGGTACTGCTACCCCGGGACGGCGCTGCCCATTTTGGTTTTGCC CTCTCGGGTACGTGCCCACGACGTGCTGTTGCTAGGCTGTTTCGGTGGTG CGTGGTGCGTTTTTCTCCTTGCTGGAAATAGCTATGCGGCCATGGTGTGC TCGAATCCCTTGGTCATCATGCACAGCGTACAACAGGCGTCGACGTGTGA TCATATCATGTGCCCAGCTTCCGTAGCAGGTAGAGGTGTGCAGCTGCACT GCCCACTCCGTGGCGGTAATGCAATGTCTTCCTGCACTCGTTGTCCTTCC GGTACATGTATTGTTTCTAACTCCTAATGCTTCACGCGTGTGCCCGACGC ACTCGTCTTTGTTTCACACAAAACCTCTCCACACTACAACGACATGTACC TCCGAACTTCTTCGCACCAGATCTTCGACCCCCTCGGCCTCTCGGACGGT GCTGAACCCGAAGACATCAAGCTCTGGCGCGAGGCTGAGATCAAGCACGG GCGCGTAGCTATGCTCGCGTCGCTCGGTGTCCTTGTCGCAGAGGTACGAT GCACACCTCCACGGCCGTGGTAATTGAGCTCTTGGCGCTGAAAATGCTGT GGAGAAGAGAACGAAGAGAACGTCATTTGGTTGGTGGTTTAAAATCTTGG GCCTCCGTTTTGTTCTTGCACAACGTTCATTCCTCTCCTCTCATCATGCA AAACGCCAACGCCGTGCCGTCCTGTTTTACTTTTTTTTGCTTTCTATTCA GGAGTACCACCCGTTCTTCATGGGCCCGGACTACATCGGCCCCGCCGTGG ACCACTTCCAGGAGATCTCCGCTCGGTACCCGGAGGTAAGAGGAGAGAGA GCCCCCAACTGAGAGCGCAATTCTGTGTTAGAAACGCAACACAAAATTAT CGACCCCAAAGCGACGGACGAAATCATGCGCACTTATCATGTGTACAGCA GCGGCAGGCGTGGTGGGCCTCAACGATGCACATATTTCTGTACGAATGCA GCCACGCTCCTGATGGCACTTGTATGCTGGTTCCACGAAGGGTCGATCAC CTTGACTATTTGGTCTCGGTTCAGTTGGGTGTCGCCGTTCGCACAAGTAC GTGTACGAGTATCTGAAGCGTGCGCGATTCGGGTGGTGCGCACCTCCACA GCAGACTGCTCTAGTACAACACTCCGCAAAGCAAATACACGCGCTGGACT GGGACGAGTATCGCAATGTAGTGGGGTTAAACTCATGACAGCGTCGACGG GTCGTTTTGATTTTGAATGTCATTGTAAATTCGTGGTTTGCCCTTTTGTG TATATTTTTGTTGTGCGGATTGACACCCCCCGGCACCGCTGTCCACCCGA AGTATCCCCGCATGACACGAATGACGCACCTGAGAGAAATGACGTTTGAC AGTTGTCTCAAAACGGGTCTTGACACGAGAGTACGCATCGAAAATCGAAA ATGATACCGCGTGTCTCCTGAAACAGACAGCAGTAGAAGAGTGATGCTGT CGCAGGGCTGTCTCGACAGAAAATGTTCGCATCGACGATCGGAGTGGGAT TTCAATGTTAGAAACGGGTTTGTGTTCACTGGTGTACCACAGCATGTGCG TTCATCGAAATTGTGACCAGCCGAGGCACACTGAAGGAAGAGGATCACTA GCAAGTCAATAGACAGATGGTTGTAAATAGTATGCTGTGATGATCATAGC ACTAGCGCCGGAGCCACCATGCCTCAAACGCAGCACACCATATGTGCCCT ACGTCGGTCTTACCCAGGGGCGCTGGCAGCACTTGATGGATCCGATTTTA CATTTTGTGCGTGGGGGTCACTCCACCAAGAACTACATTATTTTTTTATT TCGGGCGACTAGGGGACAAGAAACACGAAAACACGAGTTTTGCTCGACGA GACAGAAAAAGCAAAACTGCGAGGAGGCGTTCAGCGCGAAAATATACGAT GCAGAGGTAACAAGGCAAAATGTATCAAGAGGGATCCACTGCACAGCAGT TGCAGCAGGCACAGCAGCAGTATATTGTACACCTCATCTGATATACTGTG ACGAGAGAAGTGAGGAAGCTCGGTCTGTGCTTTTTGTCACGATGGTATCA GTTGCGTATTTGTTGGATTTGATGTCTACGGCAGACGGCCGCAGCCCAGC AGTTAATCTTGACCATCACGGGGGATATCAATCAATCTCCAGCGATTAAT CCTCGCGCATAGAACGAGAAGCTGCTCATTGCTGCTGATTGTGTTGTCGT CGTCGTTGTGTGGTACAGCAGCAGCAGTTTATTCTTGCACACCTAGGCAC TGCTGCTGTTATCGTGCTGGTATGGTTTGGGTCGGGATGGTCTCGGTTTA CACTACACAACTAGATATAGTGGGGTCTGACTGGCTTGCAGCAACCAACT TCAACCCTACCCAAAAAGTTCGTGCCCACTCTATGCTGGTGAGGAAAAGG CACAAAACGCATTAATGGCACCATTTGAGTTACACCATTTTACGCGCACG AGTGCTTCTTGCTCAGTGTCTAGTACCCTACTCAAACCAAGTACTCGAAG TGTTTTTACAGTACCCCAGATTTTGAGTGGAGGTACCTCTAGTGTACGGT AGGCGCTTTACAACTTGTGTCGTGATCACGTTAATAGAAGCATGCCGATG TGCTCCCGGAATGCATAGCAGTACCGTCGCTTCAACTCGTCACTGGCAGT GGCCACCAACTTTATGACTGCTAGCTTCTCTTCGAATTTATCACAAATGG CTCGAACGAAGTGCCCTCTATTTTGCGGACTTGCAGTTTTTACGGAGGTG CCGCACCTACGGCGAGATCCTTCACGTCATCTCGAGTATATTTAATTTAA GTACGGAGTTGTTTGTTTCCGCATTTTTGACGTTTCAGCTCATGTCATCA CTGACATGATACTCCGTTTCAAATGTACCCCCCGCGCTCCGAAACAGTTC TGGGTGTTCTCCCTCTTGGGCATGGCGTTCATCGAGTACAACACCATCAC TAAGGCATACGAGACGCCTAGCGCCGTGACCGGCGAGGGCGGCCTCAAGG AGGACTACAGCCCGGGAAACCTCGGCTTCGACCCCCTCGGCATCAAGCCA AAGACCGAGGAGGACTTGGCAGTGATGCAGACCAAGGAGCTCAACAACGG GCGCCTCGCCATGATCGGCATTGCCGGCATGTTGGTGCAGGAGCTGGTCA ACCCGGCCGACATCCTCGGTTAAAAAAAAATGTTTTGCTATTTCCGGAGT AGATGACCCTAAGAAAATGGAGTGTTTGTCTTTGCACCTAGAAGAGGCTT GCTCGATCCGCGACGGGTTGAAACTCTTGAGCTTTCGAACGGCGTTGGGT GACGTGAACGAGTGAAGGTCATGCACCGCAAAGAAAGGTGGAGAGCCTCA AAGAGAGGAATCCCTCTGTGATTTTTTCCTCCATCTAGTAAAGCGTCGTC GTATGTTATAGGCGAGCTGATGACAAAGAGAGGAAACAAGAAACCGTGGT TTACAGAGTGGATGAAATAACGTGAAGTTGTTTTGAGAAGCTCGGTCGGT GAGGTAATGTTGGGGGCCTCCAACGGCTTCCGCTTCCTTCTTTGTAGAAA ATGGGTACGACGTTGAATACATTTTTTTTATTGAAAGAGGTGAATCACCT GGATTGAAGTAGGCTACAAACGCTAAGAAAAAGATATGAAAGTGTCGGCA GTTTTCCTATTGGTCAACATGAGCGCCACGGATTTTAACCCCCTCGCTCC CCTTTAGACATTACTGCAAACACCGATGATCGCGCCCAGGCTTATCACGT CACTCTAAATGGAATGACACGAGAGTGAAGATTTGTTGTGTACTGCCGTG TACGGGGTCTTCGGCCAGACTTTTGTGTCCCTTGGTGAACCATGTGCGGT ATTCGCGCTCTTGGTGGAATTTCCAGTGCCGTATCACTTGAAACCTCTGA AGAGGCCGGATCTGGGGTCGCAGAAATTCTAGCGTGCCGGCCCCCCTCAT TTAATACAACACATGCCTCAATTTTTGGTTTGCCTAGCATGTGGAGTTGT GTTGTGCAGTTCGGCCCAAACACATGTCGCGGCGGGGGGGGTTTCCCGGT ACCGCCTGTACCATTTGAACTTCAACCTTCTCCTAAAGAACCGTATGCCC TCCAATGACTGCTGTATTCTTCTTATCCCATCTCCGCTGTTGTGTCAGTA GACGAAACGTTCCCCCGATATTTTTGCGGAAGGTGTGGCGCCTTGGCTTC AAATCCTGAGCACATGAACATGAAAAAACTTTAAACTTTGCTCTATTTCA CGATGCCACAGCCCACCGATTAATGACGAGAAGGGTTCTATTTTTATAGG AGCAGGCAGCCACAATGTGTTCAAGATTCTTTCGTTCTTCTGGTCTTTTT GTATGTGATATCTGAGGCAAGCAAGCGACCCACATTTGCGCCGCGCTTGA GAGATGTGTAGAAATCCGATTAAGGGATGCTTGCGACGTGAAAAGTCAGG AACATCCGAAGTCCGAGTGAACTGGGGTTAATTACAGTACCGACCGGCTT TTAAGAAACTGGAAATCAGCCTCAGCCTTGGCTTTTTGTCGTATCATCAG CACTAAGTATGGCTATTTCTTAACCATCGTATAGGATTTAGTGTGGCGCC GGCTGCCGAGCCCATTTTCTTACGCCACATTTCTTAATTTTTGAAAAATT CCCGCCTTGCTTTCTTTTACTGAGTATGGCTATTTCTTATAAGCGGGCCG GTACTGTATCCTACCGCCCGAAATTCTCCAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig146:480601..485582-

>mRNA_P-littoralis_Contig146.124.2 ID=mRNA_P-littoralis_Contig146.124.2|Name=mRNA_P-littoralis_Contig146.124.2|organism=Pylaiella littoralis U1_48|type=CDS|length=669bp|location=Sequence derived from alignment at P-littoralis_Contig146:480601..485582- (Pylaiella littoralis U1_48)
ATGGTTGCCACCACCACCCAGATGTTCCTCGGCACCGCCGCCACCCTGAT
CGCCTCGTCCTCGGCGTTCGTCGCACCGATGGCAGTGCGATCCGTTGCGC
CTGCCGCACCCTCATCGAGCCTCAAGATGAGCGCCGGATCGGACTACGTC
GCAACCCTCCCCGGCGCTCCCTTCGGCGACGGCAAGATCTTCGACCCCCT
CGGCCTCTCGGACGGTGCTGAACCCGAAGACATCAAGCTCTGGCGCGAGG
CTGAGATCAAGCACGGGCGCGTAGCTATGCTCGCGTCGCTCGGTGTCCTT
GTCGCAGAGGAGTACCACCCGTTCTTCATGGGCCCGGACTACATCGGCCC
CGCCGTGGACCACTTCCAGGAGATCTCCGCTCGGTACCCGGAGTTCTGGG
TGTTCTCCCTCTTGGGCATGGCGTTCATCGAGTACAACACCATCACTAAG
GCATACGAGACGCCTAGCGCCGTGACCGGCGAGGGCGGCCTCAAGGAGGA
CTACAGCCCGGGAAACCTCGGCTTCGACCCCCTCGGCATCAAGCCAAAGA
CCGAGGAGGACTTGGCAGTGATGCAGACCAAGGAGCTCAACAACGGGCGC
CTCGCCATGATCGGCATTGCCGGCATGTTGGTGCAGGAGCTGGTCAACCC
GGCCGACATCCTCGGTTAA
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