mRNA_P-littoralis_Contig146.119.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: D7G7Q4_ECTSI (Dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q4_ECTSI) HSP 1 Score: 559 bits (1441), Expect = 5.880e-189 Identity = 289/384 (75.26%), Postives = 323/384 (84.11%), Query Frame = 3
Query: 144 VAVMILSIANGGAFRPHHGIVRSCSARTRLLSPPPALADRVLSPQEYATATVARPAVEAARPENNEAESVSFFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVRE 1295
+A+++ + G AF+ R+ RLLS AL DRV SPQ+ + P E A E++EAE SFFE+IGRP+Y+AAPMVEQSEAAFR LV+RHGC LAYTQMLHA KFAP++A KFR RFD VD + DRPLI QFCGN+PDTVVRAARHVE RCD VDLNLGCPQKIAKKGNYGA+LL +PQLCEDIV+AMSRELSVPVTVKIRAQ+ ESDTL+LARRLEGAGAQLLTVHGRTVSS+KT QGAA+WDIIRKVK+ V IPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFD + PMEELQG+EVAHRILS T EYMELVK++PAPMISIKGHLFKMLYRLLECHHDLR RL H+QCDA+EA+ IV E
Sbjct: 21 MAILLPFMTRGWAFQTSCINARAIGG-ARLLSSRQALTDRVPSPQQESHC----PPEEEAGREHSEAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDRESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAADWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLIPMEELQGLEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHE 399
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A6H5JD10_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD10_9PHAE) HSP 1 Score: 532 bits (1370), Expect = 2.540e-167 Identity = 285/419 (68.02%), Postives = 317/419 (75.66%), Query Frame = 3
Query: 132 RAMTVAVMILSIANGGAFRPHHGIVRSCSARTRLLSPPPALADRVLSPQEYATATVARPAVEAARPENNEAESVSFFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEV---------------------------------AHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIV 1289
R +AV++ + G AF+ R+ R LS AL DRV PQ+ + P E A E +EA+ FFERIGRP+Y+AAPMVEQSEAAFR LV+RHGC LAYTQMLHA KFAP++A KFR RFD VD + DRPLI QFCGN+PDTVVRAARHVE RCD VDLNLGCPQKIAKKGNYGA+LL +PQLCEDIV+AMSRELSVPVTVKIRAQ+ +SDTL+LARRLEGAGAQLLTVHGRTVSS+KT QGAANWDIIRKVK+ IPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDR + P+EELQGVEV AHRILS T EYMELVK +PAPMISIKGHLFKMLYRLLECHHDLR RL H+ CDA+EA+ I+
Sbjct: 17 RLAGMAVLLPFMTRGWAFQTSCINARAMGG-ARFLSSRQALTDRVPIPQQESHC----PPEEEAGRERSEADPRGFFERIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKDSDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVAGIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRDLIPIEELQGVEVRRVSSFSCYSARRTPRMFFTCLTINAGLPGPQVAHRILSFTTEYMELVKLYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYHCDAMEADVIM 430
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A836CKE0_9STRA (tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE0_9STRA) HSP 1 Score: 363 bits (933), Expect = 2.320e-115 Identity = 186/300 (62.00%), Postives = 227/300 (75.67%), Query Frame = 3
Query: 357 FFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMIS---IKGHLFKMLYRLLECHHDLRGRL 1247
F++ IG P YVAAPMVEQSE AFR+L +RHGCDLAYTQMLHA +F+ A KFR D Q DRPLIAQFCGNDP+ +V+AAR+VE + + DLNLGCPQ+IAKKGNYGA+LL LCE ++ AM+ +L+ PVTVKIR +T++LA RLEGAG QL+TVHGRTV S KT G A+W IIR+VK A+ IPVVANGGIET ADAER L TGADA+MSSE LLE+PALFDR++ + E+ G +A R L+L EY++LV+ +P P I ++ HLFKML+RLL CH DLRGRL
Sbjct: 1 FYKAIGSPTYVAAPMVEQSEKAFRLLCRRHGCDLAYTQMLHAQQFSMLKAAKFRCVCCGGEDPQEDRPLIAQFCGNDPELLVKAARYVEHQVEACDLNLGCPQQIAKKGNYGAYLLPQGDLCERLIDAMASQLACPVTVKIRCLSTVEETVKLALRLEGAGVQLITVHGRTVRSAKTDNGPADWSIIREVKAALRIPVVANGGIETFADAERCLALTGADAIMSSEALLEDPALFDRSLPGLHEVSGAALAQRQLALAGEYLQLVQLYP-PAIGAGPVRAHLFKMLHRLLGCHTDLRGRL 299
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A7S2C8F7_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8F7_9STRA) HSP 1 Score: 328 bits (840), Expect = 1.100e-99 Identity = 188/404 (46.53%), Postives = 240/404 (59.41%), Query Frame = 3
Query: 318 AARPENNEAESVSFFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFD-------AVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVE-----------------------VAHRILSLTVEYMELVKQHPAPMI--SIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDGPLD----------TSDLRVSLKPWYRRHR 1403
AAR + + F ER+G P++VAAPMV QS+ AFR+LV+RHG DLA+TQMLHA FA + ++R+ FD + A DRPLIAQFCGNDP TVV AA +++ D +DLNLGCPQKIAKKG YGAFLLS+P L IV M+ L VP+TVKIR + +T++ A L+ AGA ++TVHGRTV K A+W ++R V++A++IPVVANGGIET +DA R L ETGAD VMSSE LLENP LF + ++L G E VA R LS EY+ L PA + + KGH FKMLYRLLE H D+R RL + + + I + RY R+P + D ++ L V+ K WYRRHR
Sbjct: 45 AARADAQPTDGSPFLERLGHPKFVAAPMVGQSDLAFRLLVRRHGADLAFTQMLHAKNFA--TVPRYREDNFDGFLRDDQSTYAMEDRPLIAQFCGNDPGTVVEAASYIQDHVDAIDLNLGCPQKIAKKGRYGAFLLSEPVLVRSIVERMATSLDVPITVKIRMLPTKEETVQFACMLQDAGAAMVTVHGRTVKQNKNLSERADWSVVRAVREALTIPVVANGGIETTSDALRCLVETGADMVMSSEALLENPGLFQQNTDHSQDLVGSEGGALNGGTSRSEMDYSEWCEAQLVAARQLSYMREYIALSTLFPARDVIGTTKGHAFKMLYRLLEVHTDVRERLVRMR-NLADLSDITDTLAARY------RLPVEASPDELRGFRCDDQSTPLHVAAKTWYRRHR 439
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A3R7YT01_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YT01_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.370e-89 Identity = 168/353 (47.59%), Postives = 217/353 (61.47%), Query Frame = 3
Query: 357 FFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF-DRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDGPLDTSDLRVSLKPWYRRHRKDE 1412
F+ IG P+ + APMV+QSE AFR+L + G D YT MLH+ F +V++R+ F+ DRPLI QFCGNDP TV+ AA+ VE CD VDLNLGCPQ IA+KG+YG+FL+ D + IV +SR L++PVTVKIR ++++TLE A LE AG LLTVHGRT KT NWDIIR++K+ +SIPV+ANGG+ET D R LE TG D VMSSEGLLENPALF D KP ++ +++A + L Y PA ++ HLFKML++ L H DLR LA + E IV E+ R D + S+ T + S WYRRHR+ +
Sbjct: 18 FYRAIGSPKRIVAPMVDQSELAFRMLCRTLGADCCYTPMLHSRLFT--ESVEYREKMFEH--HLQDRPLIVQFCGNDPKTVLMAAKMVESHCDAVDLNLGCPQGIARKGHYGSFLMHDKNTVKSIVETLSRGLTIPVTVKIRVFNDDNETLEFAEMLEKAGCDLLTVHGRTKEMNKTAVQEVNWDIIRRIKERLSIPVIANGGLETHEDIARCLEATGCDGVMSSEGLLENPALFADSNNKPGQDTSFLQLARQYLEYATLY------PPANDKIVRAHLFKMLFQDLRVHSDLRDALAAAKSQK-EMVDIVDELAVRLKKAEDDKATSEIKKTTYAMETS---WYRRHRQGQ 356
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A8K1CA77_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA77_PYTOL) HSP 1 Score: 296 bits (757), Expect = 1.930e-88 Identity = 173/355 (48.73%), Postives = 220/355 (61.97%), Query Frame = 3
Query: 357 FFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEA---IVREMCQRYFFDPDTRMPSDGPLDTSDLRVSLKPWYRRHRKDE 1412
FF IG P+ V APMV+QSE AFR+L +RHG +L YT M H+ FA ESA ++R F+ DRPLI QFCGNDP TV+ AARHVEG CD VDLNLGCPQ IA+KG YG+FL+ + DIV+ +S+ LS+PVTVKIR + +TLE A ++ AGA LL VHGRT KT A+WDIIR++K+ +SIPV+ANGGIE D ER L+ T AD VMSSE +LENPALF + VE+A + L T+EY PA I+ HLFK++++ L H DLR LA A +A IV E+ +R P + ++TS WYRRHR+ +
Sbjct: 29 FFRAIGSPQRVVAPMVDQSELAFRMLTRRHGAELCYTPMFHSRLFA-ESA-EYRAKMFEK--HIKDRPLIVQFCGNDPQTVLAAARHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDTVRDIVTTLSQNLSIPVTVKIRIFPDRQETLEFADMIQAAGADLLCVHGRTKEMNKTAVKEADWDIIREIKERLSIPVIANGGIELPEDVERCLQVTKADGVMSSEAILENPALFSTDKEASYSF--VEMAKQYLDATLEY------PPASDKIIRAHLFKIIFQDLCVHTDLRTDLAK----APNRDAMVKIVEELEKRL-----AEKPGEYKVETS--------WYRRHRRSQ 354
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: D0NNQ3_PHYIT (tRNA-dihydrouridine synthase n=25 Tax=Phytophthora TaxID=4783 RepID=D0NNQ3_PHYIT) HSP 1 Score: 293 bits (750), Expect = 1.990e-87 Identity = 166/353 (47.03%), Postives = 217/353 (61.47%), Query Frame = 3
Query: 357 FFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF-DRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDGPLDTSDLRVSLKPWYRRHRKDE 1412
F+ IG P+ + APMV+QSE AFR+L ++ G D YT MLH+ FA ESA ++R+ F+ DRPL+ QFCGNDP TV+ AA+ VEG CD VDLNLGCPQ IA+KG+YG+FL+ D + + V +S L++PVTVKIR ++++TLE A L+ AG LLTVHGRT KT NWDIIR++K+ ++IPV+ANGGIET D R LE TG D VMSSEGLLENPALF D P E+ +E+A + L Y PA ++ HLFK+L++ L H DLR LA + E IV E+ R + + GP + WYRRHR+ +
Sbjct: 17 FYRAIGSPKRIVAPMVDQSELAFRMLCRKLGADCCYTPMLHSRLFA-ESA-EYREKMFEH--HIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKETVKATVKTLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVNWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFADTNNTPGEDTSFLELARQYLECATLY------PPASDKIVRAHLFKILFQDLRVHSDLRDALAAAKSQQEMVE-IVDELAVRL---KEAESENAGPEIKKVAYAAKASWYRRHRQGQ 355
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: W7TKF8_9STRA (Dihydrouridine synthase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF8_9STRA) HSP 1 Score: 296 bits (757), Expect = 1.380e-86 Identity = 170/365 (46.58%), Postives = 223/365 (61.10%), Query Frame = 3
Query: 366 RIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFR--DGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF------------DRTIKPMEELQGVEVAHRILSLTVEYMELVKQH--PAPMISIKGHLFKMLYRLLE--CHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDGPLDTSDLRVSLKPWYRRHRK 1406
R+G PR++AAPMV+QS+ AFR LV+R+G DLAYTQM HA FA + DG +A + DRPLIAQF G+ D +VRAA ++ D VDLNLGCPQ+IAK+G+YGA+LL + L ++S M + L+VPVT KIR NE DTLEL + +E AG LLT+HGRT K + G A+W I K+K A IPVVANGG+ET DA TGADAVMSSEGLLENP+LF R E++ +AHR L+ EY+EL K+ + ++KGHLFKMLY +LE ++DLR +L + E +V+E+ + + D + + T VS WYRRHR+
Sbjct: 125 RLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAI-----VLTKGAIVSPVSWYRRHRE 484
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A5D6XL89_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL89_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.600e-86 Identity = 163/353 (46.18%), Postives = 213/353 (60.34%), Query Frame = 3
Query: 357 FFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISI-KGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDGPLDTSDLRVSLKPWYRRHRKDE 1412
FF IG P+ + APMV+QSE AFR+L +RHG +L YT M H+ FA A +R+ F+ DRPLI QFCGNDP T++ AA+ VEG CD VDLNLGCPQ IA+KG YG+FL+ D IV +S L+VPVTVKIR +E +TLE L+ AG LL VHGRT KT AA+W I++++K ++IPVVANGGIE D +R L+ T AD VMSSE +LENPALF R + +++ ++L EY+ L + P I + HLFK+L++ L H DLR LA + V AIVRE+ R D P P+ + + WYRRHR+ +
Sbjct: 8 FFNAIGAPKRIVAPMVDQSELAFRMLCRRHGAELCYTPMFHSRLFAESPA--YREKMFEQ--HVHDRPLIVQFCGNDPQTMLAAAKLVEGHCDAVDLNLGCPQGIARKGRYGSFLMQDKAAVRAIVETLSAHLAVPVTVKIRVFPDEQETLEFCDMLQAAGCDLLVVHGRTKEMNKTAVRAADWGIVQRIKARLTIPVVANGGIEAPGDVQRCLDATHADGVMSSEAILENPALFSRRDRTTTATATPSLSY--VALATEYLALAEDFPPASDKIVRAHLFKLLFQDLRVHTDLRDALAAAKT-RVHMAAIVREVETRA---ADPSHPQHRPV----VYAAATSWYRRHREGQ 346
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Match: A0A2D4BU30_PYTIN (Dus domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU30_PYTIN) HSP 1 Score: 290 bits (743), Expect = 3.480e-86 Identity = 169/367 (46.05%), Postives = 215/367 (58.58%), Query Frame = 3
Query: 315 EAARPENNEAESVSFFERIGRPRYVAAPMVEQSEAAFRILVKRHGCDLAYTQMLHAAKFAPESAVKFRDGRFDAVDAQADRPLIAQFCGNDPDTVVRAARHVEGRCDGVDLNLGCPQKIAKKGNYGAFLLSDPQLCEDIVSAMSRELSVPVTVKIRAQENESDTLELARRLEGAGAQLLTVHGRTVSSKKTTQGAANWDIIRKVKDAVSIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRTIKPMEELQGVEVAHRILSLTVEYMELVKQHPAPMISIKGHLFKMLYRLLECHHDLRGRLAHWQCDAVEAEAIVREMCQRYFFDPDTRMPSDG-PLDTSDLRVSLKPWYRRHRKDE 1412
E+ R + ++ FF IG P+ V APMV+QSE AFR+L + HG +L YT M H+ F+ ESA ++R F+ DRPL+ QFCGNDP TV+ AARHVE CD VDLNLGCPQ IA+KG YG+FL+ + + IVS +S LS+PVTVKIR + +TLE L+ AG LL VHGRT KT +WDIIR++K ++IPV+ANGGIE D +R LE TG D VMSSE +LENPALF E +E+A + L EY PA IK HLFK+L++ L H DLR LA ++ R+ R + D R+ SD P S WYRRHRK +
Sbjct: 32 ESKRVKMSKLRGFDFFRAIGSPKRVVAPMVDQSELAFRMLTRHHGAELCYTPMFHSRLFS-ESA-EYRAKMFEK--HMNDRPLVVQFCGNDPQTVLAAARHVEAHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVRSIVSTLSENLSIPVTVKIRVFPDRQETLEFCDMLQSAGCDLLVVHGRTKEMNKTAVREVDWDIIREIKQRLTIPVLANGGIEVPEDVDRCLEATGCDGVMSSEAILENPALFGS-----ERPSFMEMAKQYLDFAREY------PPASEKIIKAHLFKILFQDLRVHTDLRTELA---------KSPNRDDMARIVAELDARLSSDAFPPVVYSAETS---WYRRHRKGQ 371 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.119.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig146.119.3 >prot_P-littoralis_Contig146.119.3 ID=prot_P-littoralis_Contig146.119.3|Name=mRNA_P-littoralis_Contig146.119.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp MHRKTQEKEAATAVGRVPRAMTVAVMILSIANGGAFRPHHGIVRSCSARTback to top mRNA from alignment at P-littoralis_Contig146:459368..465530+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig146.119.3 ID=mRNA_P-littoralis_Contig146.119.3|Name=mRNA_P-littoralis_Contig146.119.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6163bp|location=Sequence derived from alignment at P-littoralis_Contig146:459368..465530+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig146:459368..465530+ >mRNA_P-littoralis_Contig146.119.3 ID=mRNA_P-littoralis_Contig146.119.3|Name=mRNA_P-littoralis_Contig146.119.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1344bp|location=Sequence derived from alignment at P-littoralis_Contig146:459368..465530+ (Pylaiella littoralis U1_48)back to top |