prot_P-littoralis_Contig146.114.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig146.114.2
Unique Nameprot_P-littoralis_Contig146.114.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length195
Homology
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A6H5JBE3_9PHAE (PSII_Pbs31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBE3_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.400e-96
Identity = 158/194 (81.44%), Postives = 176/194 (90.72%), Query Frame = 0
Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            MK+ CVALAL GS+SAF+ PMANV+TT  SSSSTSLAMSSEPM+RSQA+S LFG+TAAV AAA+VP  AFADGAKS ATQ+RARGIYGNRIAAL+GAVDKGDTAAIL EQN FRLFNSGVYSTDKAKFAEAE LAK +V +A  GDAK LK+S+AAYMK+TEKKSG++GAGDGQGFGSEFDYKNRTP+GTVYQR
Sbjct:    1 MKTACVALALLGSSSAFVVPMANVRTT--SSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSPATQARARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAEALAKSVVQAAGAGDAKALKDSYAAYMKYTEKKSGYNGAGDGQGFGSEFDYKNRTPLGTVYQR 192          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A835ZH21_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH21_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.980e-26
Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 0
Query:    1 MKSVCVALALAGSASAFI--APMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS-TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            MK+V V L LA SASAF+  AP+A V+      SS+++ MS+ P SR   + T+F  TAA VAA ++P  AFADGA S AT  RA+GIYG+++ +L GAV  G+  A+  E+N   L  SG +  + KA   +A+ L   I  +  T +A  L+ ++   +K  +  +     GD QG+ S++D+K RT  GT+Y R
Sbjct:    1 MKAVGV-LCLAASASAFMPAAPLAGVR------SSSAMTMSAAPESRRAVLQTVF--TAAAVAAVAIPELAFADGAVSEATVQRAKGIYGDKVLSLAGAVKAGNFEAVAAEKNAITLLASGGFGMSSKADKKQAQALKNAIFAAIDTKNAAALQSAYGDLIKLAKIPASTGSGGDTQGYSSDYDWKARTAKGTIYVR 188          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: B8CC14_THAPS (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC14_THAPS)

HSP 1 Score: 107 bits (267), Expect = 5.790e-26
Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 0
Query:   63 ASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            A +PS A ADGAKS ATQSRARGIYG RIAAL+ AV+ GD  A+  E+N F LFNSG  + DK+K +EA +    I  +    DA  LK ++A Y    + K   +    GQG+ +++D+K RT +GT+Y R
Sbjct:   46 AGLPSLALADGAKSAATQSRARGIYGQRIAALESAVNAGDFGAVAAEKNAFILFNSGAIA-DKSKKSEAVKQTNAIFAAIRAKDAGALKSAYATYKGANDIKVIVADKESGQGYSNDYDFKARTTLGTIYVR 176          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: B6ZHE7_9STRA (Extrinsic protein in photosystem II n=1 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHE7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.010e-23
Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   63 ASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAK----FAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTE-KKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            A +PS A ADGA S AT +RARG+YG+RIAAL+ AV  GD  AI  E+N F LFNSG Y T+KAK     A+  E+ K I     +GD   +K ++ AYM   E +      +  GQG+ SEFD+++RT  G +Y R
Sbjct:   47 AGIPSIASADGAVSSATINRARGLYGDRIAALKDAVAAGDFKAIAEEKNAFILFNSGAYPTNKAKKNAAIAQTNEIFKAI----RSGDKAAVKSAYDAYMAANEIRPLPEINSNVGQGYSSEFDFRSRTKAGAIYVR 179          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2KTS3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KTS3_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.460e-23
Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 0
Query:    3 SVCVALALAGSASAFI-APMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            S  +AL  A SASAF  AP+           STSL M        +A +T   + AAV+A   +P  A ADGA+S  T  RARGIYG RIA L+GAV+ GD  A+ +E+N F LFNSG   TDKAK A+A      I  +    DA  LK+++  Y    E         +GQG+ S+ D+K RTP G +Y R
Sbjct:    4 SAAIALTFAASASAFAPAPVERA--------STSLNMDR------RAAATQIATGAAVLAG--LPQLALADGARSAVTVQRARGIYGQRIAGLEGAVNAGDFGAVASEKNAFILFNSGGI-TDKAKKAQAVAGTNAIFAAIRAKDAGALKKAYGDYKSANEISVITVDMTNGQGYSSDADWKTRTPAGAIYVR 179          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A6S8V106_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8V106_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.320e-22
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 0
Query:   57 AAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEEL--AKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFS-----GAGDGQGFGSEFDYKNRTPMGTVYQR 194
            AA  A ASVP+ A ADGA S AT  RARGIYGNR+AAL+GAV  GD  A+  E+N F LFNSG Y   K K A+A  +     I ++  + DA GLK ++ +Y+      +G +      A  GQG+ S++DY+ R+  G +Y R
Sbjct:   43 AAAAALASVPAIANADGAVSSATVGRARGIYGNRVAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKVAKAAAIEGTNAIFSAIRSKDAAGLKSAYGSYIA----ANGINPLPAVDANSGQGYCSDYDYRVRSSAGAIYVR 183          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A836CPF3_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.050e-22
Identity = 74/195 (37.95%), Postives = 108/195 (55.38%), Query Frame = 0
Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS-TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            MK+ C  +AL GSA+AF AP A      SS    ++ MS+ P SR + + T   + +A  AAA  P  AFADGA S +T  RA+GIYG+++  L GAV  G+  A+  E     L  SG ++   KA  A A+     I  +  + DA  L+ ++A  +K  +  +  +G GD QG+ S++D+K RT  GT+Y R
Sbjct:    1 MKAACAVVALVGSAAAF-APAAPAVAVRSS----AMTMSAAPESRREVLRT---AVSAAAAAAVFPQLAFADGAVSESTVQRAKGIYGDKVLNLAGAVKAGNFEAVKAESGAISLLTSGGFARASKADKAAAKAAKDAIFAAVESKDAAKLQSAYADLVKLAKIPASTAGGGDTQGYSSDYDWKARTAKGTIYVR 187          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2S7V4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7V4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.070e-22
Identity = 69/167 (41.32%), Postives = 98/167 (58.68%), Query Frame = 0
Query:   35 SLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS----TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDG--QGFGSEFDYKNRTPM-GTVYQR 194
            S+ MS+E  SR   +    G+   V + AS   AAFADGA SLAT +RARG+YG RIAAL  +V+KGD  A+  E+N F LFNSGVY+     D+     A      +  + S GD  G+K ++A +MK  + + G+SG      QG+ +E+D+K + P  G++Y R
Sbjct:   41 SVVMSAEGESRRDMLVKGAGALGVVFSGAS---AAFADGAVSLATVARARGLYGGRIAALSDSVNKGDLEAVEAEKNAFILFNSGVYARNGPVDRKNKKVAVAATNSLFDAVSKGDKAGVKSAYAEFMKVADIQPGYSGKDKDFTQGYSTEYDWKYKDPKKGSIYIR 204          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2IG61_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG61_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.280e-22
Identity = 64/141 (45.39%), Postives = 84/141 (59.57%), Query Frame = 0
Query:   57 AAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVY--STDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKS-GFSGAGDGQGFGSEFDYKNRTPMGTVYQR 194
            AA  A ASVP+ A ADGA S AT  RARGIYG RIAAL+GAV  GD  A+  E+N F LFNSG Y  + +KA  A A E    I  +  + D+  LK ++ +Y+   +  +     A  GQG+ S++DY+ RT  G +Y R
Sbjct:   43 AAAAAIASVPAVANADGAVSAATVGRARGIYGGRIAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKANKAAAIEGTNSIFAAIRSKDSAALKSAYKSYIAANDISALPAVDANSGQGYCSDYDYRVRTDAGAIYVR 183          
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2C001_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C001_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.180e-21
Identity = 79/201 (39.30%), Postives = 114/201 (56.72%), Query Frame = 0
Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEEL----AKGIVTSASTGDAKGLKESFAAYMKFTEKKS-GFSG--AGDGQGFGSEFDYKNRTPMGTVYQR 194
            M+S  VALAL  SASAF   +   ++T S        MS+E + R   I+   G    V A A    AA ADGA SLAT +R+RGIYG R+A L GAV+KGD  A+L E+N F LFN+   S ++ K  E +++     + ++ +A+ GD   LK ++A Y+K     +  + G  A   QG+ +++D+K RT  GT+Y R
Sbjct:   16 MRSFIVALALLASASAFSPTILRARSTVS--------MSAENVDRRGMITKTAGVLGGVFAGAQ---AANADGAVSLATMARSRGIYGTRVADLAGAVEKGDFEAVLAEKNAFVLFNN---SNNRPKNKEEKKINAVKQEAVLAAAAKGDKAALKAAYADYIKTASLPNPAYKGRDADYSQGYSNDYDWKARTNRGTIYVR 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JBE3_9PHAE2.400e-9681.44PSII_Pbs31 domain-containing protein n=2 Tax=Ectoc... [more]
A0A835ZH21_9STRA3.980e-2640.61Extrinsic protein in photosystem II n=1 Tax=Tribon... [more]
B8CC14_THAPS5.790e-2647.73PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]
B6ZHE7_9STRA6.010e-2346.72Extrinsic protein in photosystem II n=1 Tax=Chaeto... [more]
A0A7S2KTS3_9STRA8.460e-2341.97Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6S8V106_9STRA1.320e-2244.83Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
A0A836CPF3_9STRA4.050e-2237.95Extrinsic protein in photosystem II n=1 Tax=Tribon... [more]
A0A7S2S7V4_9STRA6.070e-2241.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2IG61_9STRA7.280e-2245.39Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2C001_9STRA3.180e-2139.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040933Photosystem II Psb31 proteinPFAMPF18240PSII_Pbs31coord: 74..164
e-value: 5.7E-35
score: 119.5
NoneNo IPR availableGENE3D1.20.120.1740coord: 72..194
e-value: 8.3E-40
score: 138.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:445482..448637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.114.2mRNA_P-littoralis_Contig146.114.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig146 444365..448637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig146.114.2 ID=prot_P-littoralis_Contig146.114.2|Name=mRNA_P-littoralis_Contig146.114.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAIS
TLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDK
GDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGL
KESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040933PSII_Pbs31