mRNA_P-littoralis_Contig146.114.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig146.114.2
Unique Name	mRNA_P-littoralis_Contig146.114.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A6H5JBE3_9PHAE (PSII_Pbs31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBE3_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 3.080e-91
Identity = 158/194 (81.44%), Postives = 176/194 (90.72%), Query Frame = 1

Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            MK+ CVALAL GS+SAF+ PMANV+TT  SSSSTSLAMSSEPM+RSQA+S LFG+TAAV AAA+VP  AFADGAKS ATQ+RARGIYGNRIAAL+GAVDKGDTAAIL EQN FRLFNSGVYSTDKAKFAEAE LAK +V +A  GDAK LK+S+AAYMK+TEKKSG++GAGDGQGFGSEFDYKNRTP+GTVYQR
Sbjct:    1 MKTACVALALLGSSSAFVVPMANVRTT--SSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSPATQARARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAEALAKSVVQAAGAGDAKALKDSYAAYMKYTEKKSGYNGAGDGQGFGSEFDYKNRTPLGTVYQR 192

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A835ZH21_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH21_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.510e-24
Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 1

Query:    1 MKSVCVALALAGSASAFI--APMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS-TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            MK+V V L LA SASAF+  AP+A V+      SS+++ MS+ P SR   + T+F  TAA VAA ++P  AFADGA S AT  RA+GIYG+++ +L GAV  G+  A+  E+N   L  SG +  + KA   +A+ L   I  +  T +A  L+ ++   +K  +  +     GD QG+ S++D+K RT  GT+Y R
Sbjct:    1 MKAVGV-LCLAASASAFMPAAPLAGVR------SSSAMTMSAAPESRRAVLQTVF--TAAAVAAVAIPELAFADGAVSEATVQRAKGIYGDKVLSLAGAVKAGNFEAVAAEKNAITLLASGGFGMSSKADKKQAQALKNAIFAAIDTKNAAALQSAYGDLIKLAKIPASTGSGGDTQGYSSDYDWKARTAKGTIYVR 188

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: B8CC14_THAPS (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC14_THAPS)

HSP 1 Score: 108 bits (269), Expect = 1.160e-23
Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 1

Query:  187 ASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            A +PS A ADGAKS ATQSRARGIYG RIAAL+ AV+ GD  A+  E+N F LFNSG  + DK+K +EA +    I  +    DA  LK ++A Y    + K   +    GQG+ +++D+K RT +GT+Y R
Sbjct:   46 AGLPSLALADGAKSAATQSRARGIYGQRIAALESAVNAGDFGAVAAEKNAFILFNSGAIA-DKSKKSEAVKQTNAIFAAIRAKDAGALKSAYATYKGANDIKVIVADKESGQGYSNDYDFKARTTLGTIYVR 176

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: B6ZHE7_9STRA (Extrinsic protein in photosystem II n=1 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHE7_9STRA)

HSP 1 Score: 100 bits (249), Expect = 6.570e-21
Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 1

Query:  187 ASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAK----FAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTE-KKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            A +PS A ADGA S AT +RARG+YG+RIAAL+ AV  GD  AI  E+N F LFNSG Y T+KAK     A+  E+ K I     +GD   +K ++ AYM   E +      +  GQG+ SEFD+++RT  G +Y R
Sbjct:   47 AGIPSIASADGAVSSATINRARGLYGDRIAALKDAVAAGDFKAIAEEKNAFILFNSGAYPTNKAKKNAAIAQTNEIFKAI----RSGDKAAVKSAYDAYMAANEIRPLPEINSNVGQGYSSEFDFRSRTKAGAIYVR 179

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2KTS3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KTS3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 8.970e-21
Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 1

Query:    7 SVCVALALAGSASAFI-APMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            S  +AL  A SASAF  AP+           STSL M        +A +T   + AAV+A   +P  A ADGA+S  T  RARGIYG RIA L+GAV+ GD  A+ +E+N F LFNSG   TDKAK A+A      I  +    DA  LK+++  Y    E         +GQG+ S+ D+K RTP G +Y R
Sbjct:    4 SAAIALTFAASASAFAPAPVERA--------STSLNMDR------RAAATQIATGAAVLAG--LPQLALADGARSAVTVQRARGIYGQRIAGLEGAVNAGDFGAVASEKNAFILFNSGGI-TDKAKKAQAVAGTNAIFAAIRAKDAGALKKAYGDYKSANEISVITVDMTNGQGYSSDADWKTRTPAGAIYVR 179

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A6S8V106_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8V106_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.360e-20
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 1

Query:  169 AAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEEL--AKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFS-----GAGDGQGFGSEFDYKNRTPMGTVYQR 582
            AA  A ASVP+ A ADGA S AT  RARGIYGNR+AAL+GAV  GD  A+  E+N F LFNSG Y   K K A+A  +     I ++  + DA GLK ++ +Y+      +G +      A  GQG+ S++DY+ R+  G +Y R
Sbjct:   43 AAAAALASVPAIANADGAVSSATVGRARGIYGNRVAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKVAKAAAIEGTNAIFSAIRSKDAAGLKSAYGSYIA----ANGINPLPAVDANSGQGYCSDYDYRVRSSAGAIYVR 183

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A836CPF3_9STRA (Extrinsic protein in photosystem II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.820e-20
Identity = 74/195 (37.95%), Postives = 108/195 (55.38%), Query Frame = 1

Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS-TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            MK+ C  +AL GSA+AF AP A      SS    ++ MS+ P SR + + T   + +A  AAA  P  AFADGA S +T  RA+GIYG+++  L GAV  G+  A+  E     L  SG ++   KA  A A+     I  +  + DA  L+ ++A  +K  +  +  +G GD QG+ S++D+K RT  GT+Y R
Sbjct:    1 MKAACAVVALVGSAAAF-APAAPAVAVRSS----AMTMSAAPESRREVLRT---AVSAAAAAAVFPQLAFADGAVSESTVQRAKGIYGDKVLNLAGAVKAGNFEAVKAESGAISLLTSGGFARASKADKAAAKAAKDAIFAAVESKDAAKLQSAYADLVKLAKIPASTAGGGDTQGYSSDYDWKARTAKGTIYVR 187

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2S7V4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7V4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.800e-20
Identity = 69/167 (41.32%), Postives = 98/167 (58.68%), Query Frame = 1

Query:  103 SLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYS----TDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKSGFSGAGDG--QGFGSEFDYKNRTPM-GTVYQR 582
            S+ MS+E  SR   +    G+   V + AS   AAFADGA SLAT +RARG+YG RIAAL  +V+KGD  A+  E+N F LFNSGVY+     D+     A      +  + S GD  G+K ++A +MK  + + G+SG      QG+ +E+D+K + P  G++Y R
Sbjct:   41 SVVMSAEGESRRDMLVKGAGALGVVFSGAS---AAFADGAVSLATVARARGLYGGRIAALSDSVNKGDLEAVEAEKNAFILFNSGVYARNGPVDRKNKKVAVAATNSLFDAVSKGDKAGVKSAYAEFMKVADIQPGYSGKDKDFTQGYSTEYDWKYKDPKKGSIYIR 204

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2IG61_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG61_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.430e-20
Identity = 64/141 (45.39%), Postives = 84/141 (59.57%), Query Frame = 1

Query:  169 AAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVY--STDKAKFAEAEELAKGIVTSASTGDAKGLKESFAAYMKFTEKKS-GFSGAGDGQGFGSEFDYKNRTPMGTVYQR 582
            AA  A ASVP+ A ADGA S AT  RARGIYG RIAAL+GAV  GD  A+  E+N F LFNSG Y  + +KA  A A E    I  +  + D+  LK ++ +Y+   +  +     A  GQG+ S++DY+ RT  G +Y R
Sbjct:   43 AAAAAIASVPAVANADGAVSAATVGRARGIYGGRIAALEGAVASGDFGAVAAEKNAFILFNSGAYPGAKNKANKAAAIEGTNSIFAAIRSKDSAALKSAYKSYIAANDISALPAVDANSGQGYCSDYDYRVRTDAGAIYVR 183

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BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Match: A0A7S2C001_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C001_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.600e-19
Identity = 79/201 (39.30%), Postives = 114/201 (56.72%), Query Frame = 1

Query:    1 MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAISTLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDKGDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEEL----AKGIVTSASTGDAKGLKESFAAYMKFTEKKS-GFSG--AGDGQGFGSEFDYKNRTPMGTVYQR 582
            M+S  VALAL  SASAF   +   ++T S        MS+E + R   I+   G    V A A    AA ADGA SLAT +R+RGIYG R+A L GAV+KGD  A+L E+N F LFN+   S ++ K  E +++     + ++ +A+ GD   LK ++A Y+K     +  + G  A   QG+ +++D+K RT  GT+Y R
Sbjct:   16 MRSFIVALALLASASAFSPTILRARSTVS--------MSAENVDRRGMITKTAGVLGGVFAGAQ---AANADGAVSLATMARSRGIYGTRVADLAGAVEKGDFEAVLAEKNAFVLFNN---SNNRPKNKEEKKINAVKQEAVLAAAAKGDKAALKAAYADYIKTASLPNPAYKGRDADYSQGYSNDYDWKARTNRGTIYVR 202

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig146.114.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A6H5JBE3_9PHAE	3.080e-91	81.44	PSII_Pbs31 domain-containing protein n=2 Tax=Ectoc...	[more]
A0A835ZH21_9STRA	8.510e-24	40.61	Extrinsic protein in photosystem II n=1 Tax=Tribon...	[more]
B8CC14_THAPS	1.160e-23	47.73	PSII_Pbs31 domain-containing protein n=1 Tax=Thala...	[more]
B6ZHE7_9STRA	6.570e-21	46.72	Extrinsic protein in photosystem II n=1 Tax=Chaeto...	[more]
A0A7S2KTS3_9STRA	8.970e-21	41.97	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A6S8V106_9STRA	1.360e-20	44.83	Hypothetical protein n=6 Tax=Ditylum brightwellii ...	[more]
A0A836CPF3_9STRA	3.820e-20	37.95	Extrinsic protein in photosystem II n=1 Tax=Tribon...	[more]
A0A7S2S7V4_9STRA	5.800e-20	41.32	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2IG61_9STRA	6.430e-20	45.39	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S2C001_9STRA	2.600e-19	39.30	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig146	contig	P-littoralis_Contig146:444365..448637 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7G7Q2
Model size	1702
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	chloroplast
Exons	4
Evalue	3.37e-98
EggNOG OGs	2BYH2@1\|root,2S4K1@2759\|Eukaryota
Ec32 ortholog description	imm downregulated 23
Ec32 ortholog	Ec-06_000790.1
Cds size	585

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789689.2848105-UTR-P-littoralis_Contig146:444364..445481	1680789689.2848105-UTR-P-littoralis_Contig146:444364..445481	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig146 444365..445481 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789689.299911-CDS-P-littoralis_Contig146:445481..445487	1680789689.299911-CDS-P-littoralis_Contig146:445481..445487	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig146 445482..445487 -
1680789689.311179-CDS-P-littoralis_Contig146:446196..446221	1680789689.311179-CDS-P-littoralis_Contig146:446196..446221	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig146 446197..446221 -
1680789689.3239012-CDS-P-littoralis_Contig146:447602..448070	1680789689.3239012-CDS-P-littoralis_Contig146:447602..448070	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig146 447603..448070 -
1680789689.3324468-CDS-P-littoralis_Contig146:448551..448637	1680789689.3324468-CDS-P-littoralis_Contig146:448551..448637	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig146 448552..448637 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig146.114.2	prot_P-littoralis_Contig146.114.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig146 445482..448637 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig146:444365..448637-
coding sequence from alignment at P-littoralis_Contig146:444365..448637-

protein sequence of mRNA_P-littoralis_Contig146.114.2

>prot_P-littoralis_Contig146.114.2 ID=prot_P-littoralis_Contig146.114.2|Name=mRNA_P-littoralis_Contig146.114.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MKSVCVALALAGSASAFIAPMANVQTTCSSSSSTSLAMSSEPMSRSQAIS
TLFGSTAAVVAAASVPSAAFADGAKSLATQSRARGIYGNRIAALQGAVDK
GDTAAILNEQNVFRLFNSGVYSTDKAKFAEAEELAKGIVTSASTGDAKGL
KESFAAYMKFTEKKSGFSGAGDGQGFGSEFDYKNRTPMGTVYQR*

mRNA from alignment at P-littoralis_Contig146:444365..448637-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig146.114.2 ID=mRNA_P-littoralis_Contig146.114.2|Name=mRNA_P-littoralis_Contig146.114.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4273bp|location=Sequence derived from alignment at P-littoralis_Contig146:444365..448637- (Pylaiella littoralis U1_48)
ATGAAGTCTGTCTGCGTTGCTCTGGCTCTTGCGGGAAGCGCCTCGGCGTT
CATCGCCCCCATGGCGAACGTGCAGACGACTTGCAGGTAAATGCGCTGCA
ATTTCTGGCCTCGTAAAACTTCTCTTGCTTCTTCTGGGTTTTGAGTCCCG
TTTACCTGCTGTGTTCATGCGTCACGGCCTCTCGTCCCTAGGCTTTGTGC
GCAACACCGCCAGCTTAGGGAGATGCAAGACATCGTTTGGTCGAGAGAAG
AGAGATTGTTTTGCGTAGACGGGTTGCTCTAAGTGGCTTCTCATGATCCT
CCGGTAGCTCAAAATTCACTCAAATTCAACACGCACTCGGTTTCAACATT
TTTGTCTTGGTTTCAGAGACGCAGCCAACCCTCGTTTCGACGCTCATGCC
TGTTTCATCTGGAAGGATAGTGCACGCATGTCAACCACGAACATCGGCGT
GTTCATGTTAGCCGACATCAACCCACACAACCTCCGGGCACGACCAAGGG
CACCCTCCTTATCAATATTTGCTCCCCTTCCACGCCCCCACTTTTTCTTG
CTTGCTTGCGGTAGCAGCTCCTCCTCCTCCACCTCGTTGGCGATGTCCAG
CGAACCCATGTCTCGATCGCAGGCGATCAGCACCCTCTTCGGCTCCACCG
CCGCCGTCGTGGCGGCAGCATCCGTCCCGAGCGCAGCCTTCGCAGACGGC
GCCAAGTCTCTCGCCACCCAGTCCCGGGCGCGAGGCATCTACGGCAACCG
CATCGCCGCACTGCAGGGAGCGGTGGACAAAGGAGACACGGCCGCCATCT
TGAACGAGCAGAACGTCTTCCGTCTCTTCAACTCAGGGGTGTACTCCACC
GACAAGGCCAAGTTCGCAGAGGCGGAAGAGCTGGCCAAGGGCATCGTAAC
CTCAGCCAGCACCGGAGACGCTAAGGGTCTCAAGGAATCGTTCGCGGCGT
ACATGAAGTTCACGGAGAAGAAGAGCGGCTTCAGCGGCGCCGGCGACGGA
CAGGGCTTCGGATCTGAGTTCGACTACAAGAACAGGTGTGTCCAAGTACA
CGCGTGTGTGACACCGCTGGAAATACCGACATCATACCCACTGCTGTACT
GCTGTACGACAGCTTCCCAAGAACGATGTAACGCTTTCCCCCCCCTTCCC
CTCATGAAAACTTAGCTGGGACTCCTGTCAAAATTAGTTGAGACCCGGAT
CTCGTTTTGCTCTTCAATGTGATGACGAAACTTTGTGAACATGTCGAAAA
TGGATATGGCAGTATTTAATCCCTCTCGTTCTTTTCCAGATCGATTCATT
CTTGTTTTTGCACTCGTGGTAGGTATCAAGGTTCCCCATCAAATGTTAAT
GTTTCCTTTTGAGCGCGAAACAAACAGCGGCAACTGAGAGAACACGGTGA
TTCGAAGCATACATGATACATATGAAACTCGTCAAATGTGTCAATCGATC
ATGTCTGTGCTGTTTTGATACAATATCATACCGAAATACGGCATAGTAAT
CGGTAGAACCGTGACGTTGTACGGTAGGTCATGATACCCGCCACACGCTG
AGAGACAAACGCCCCATTCCCAGTGCCTGGTACAAACTAGGATACCAAAA
TCAAAGGATCCATGCTGTTGAACACCCATGCCACCGGTTGGAGCAGAAGG
CATCCGTTCGGCTTGTATGTACACGTGTAAACCGGTTAATTCCACCACCA
CTGCTTTTGGTATGTACAACACAGCGGTTGCATGTTGCAACTACCGTATC
CACGTACCAGTCCAAGTTGGGCGTTTTGAACCGCAGGGTGTAGGGACGTT
TTGCATGATTTTCGAGCCTGGCATATAAACCGGCACGTTAGGTACGTCAC
TTAGTTTACTCGAGCCCCATGCGTTTAAAGGGCCCGCCCTCCGATAAATC
GCTTTCAGCCGTCTCATTGCATGGTCAGCTTCCACAAAAGCGTATTGGCA
CAATCCAAGTGCAGAGGCGTGGTTTCGTGAAATATCATGGAACGTAGTAA
GCCATAAAGATTTTCTGAACGCCGCTTTCGAGCTTGCCTAGTTGTCCCTT
TGTCTGAACCGCGGAATCGCGCCAACTCTGTCCGAAATCGATATTTCATG
TGTTGATTGTTGAAAGGATTTGCAATGTGCGTACTGCTTGTGAAGTAGTC
CGCGCCTTCACCGCCTGCGCTCCTTGTAGGTGTTGAGCGCAATTGAATTT
TTTAACAGTCTTCTGACGCAAGCCCCACTTCCTCTCCCACACCGCGGCCT
CGCTCTTGATACTCTTGTATCTGCTCTTGTTGACACCAAACGCTCCTGCC
CGTCTCATGGGTCCGACCAATCGTTTGCCATCGATCGGTGTCTTTGACGC
CGCTCCAAACACGACCTCGCTCGGTTTGGATCGATCAACCTTGCTTTCGA
TGTTTCGATGTAACAGGACACCCATGGGAACCGTCTACCAGGTGAGACGC
TTGGGGTATCATGCACCCGCCGACCACCTGTATTTCACCTTGCATTGTCT
ACTTTGGTAGGGCGTCTGTTAAAACTACAGCATGTTATGTTGTCAGGTTT
TGCCTGCGAGTACTGTTTTCACATCTCCATGCAGGACAAAGCTGTTGAAG
GCTTTGAGCATTTGACAAGAGCACACATTGCCGTTTTCAACGAGGAGCAT
CTTGTGCTTTTTTGCGTGTGACGTTTCGAGTATATCGTTTCGTTGGGTGT
CGACGCCAGTCTGATGCATTCTGTGCCAGGGCTTGCTCCTTGTGTGCGTT
TACGTAAAGGCTCGGCGTTTGGCCGCATGCCTGCAATGAAACCTTAGCTG
TTGTTTATATTAATCATGCCGCCATCTGCTAGATGTGCTATAGCTTTAAA
AGCCGGATACAAACACGAGTTTATGTTGAAGTCGTTTGTCCTATTGTGAG
TAAACTCGGCAGGACTGCCGTGCTCGCGAGTGGCATACAAGTAGAAGTTT
GATTTTCCGTCCCAGGCTGCGCGGACCAAGCACAGATGAGCAACGAACGC
CCGACGATTACTCCGAATTTCGCACCTGTCGTTTCAACAGTTCGCTACAC
TCACGTCCATGTTGATCTCGCTGCCGAACTTCTGATGTCCGACTCTTCAT
CCCGCCTTTGCACTCTCTCCCGTACTATCCTCGTTCTACTTGTACAACAG
AGGTAAAAACGCCTTCTCGCTTTTGGAGCATAGAAGGAGCAATACTTGGG
CGGGACTTTTATTTTGGCCATAATTTTTCTGGTCGTTTCAACAATCTGGA
CCCGCGCCCTTGTGATCGGGGGAGAAGCGCAACGTTCACGATGCTTTTAA
AGATGATGCTCCCGAAACCGAGAGTGTCATAACACCGAGGTCGGCAAGGC
CCTACAACGCTGGTAGCTTGTGTTGGCTGTGGCTGCAGCCCACAGCATAA
TGCGAGGTGCTGCGTTACGCTACAGAAAGGACGGCCACGCTGTGTTGAAT
TTCGCCATGTAGAGGTCATGTGATCGACATCTGCCGGCTGCGTCAGGTAG
CCAATGTATGCCGATTTGCGGTTATTTTTGCTCGCCGGCTTTTGCATAGA
TGGGGGGACCGGTGTGAATGTGGAGGATGTAAGCTTGGCTCGGGTTGCGA
GATAGAAACATAGACTAGGCTGCATGGTTACAGCGTGGGCGCTGCGTCTT
GTGCCGTTCCCTCGTCGTCAGTAGTCGCGTCGGTTTGCTGTTCGGTCGAC
GAGGTTCCGTGTATGTGTGGGAAATGTGCGGTGTTTATTGATAGTTCAGT
AATGGAGGAAAATTACGCTTTTTTACCCTCTGTTTTTTACTTCTCAAGTT
GGACTAAAAAACGGAGAAAACCGTACCCTGAATGACAAAAAGAACACCCC
CCACTCTAACTGCGCACTTCCGCAGGCGAAGGCAGCACAATACCTGTACA
TGCATGTGATGTAGACAGTGGACTAGTGTGGCAAGCACAAGTGTCCGGGT
TTTGCACGTACGAATGAAATGTACCATGCGGCTGCTGCTTTGCTACTGCG
GGGCGAAGTGGCTGTTTCACCGATTCATGCATGATGCCTCTGTTGAGTGT
ACAGGGCTTCGTTTCTTCACCACTGTGGTTGATTTTCGCATCCGAGCCGA
AGCTCTCTACGCTACTTGAGAATAAACCTCTTTGGAAGCCTTTTTTAGCA
GTGGTAAGTCACAAGTCATGGCCGGCAACAAGTGTACTGCTTCTGCTCAG
CGTTTGCAATGGGCATCAAAGTGTCAATTGAATGGAAACAAACCCAGGCG
TCCTGTACGTGTCACACGTCCGA

Coding sequence (CDS) from alignment at P-littoralis_Contig146:444365..448637-

>mRNA_P-littoralis_Contig146.114.2 ID=mRNA_P-littoralis_Contig146.114.2|Name=mRNA_P-littoralis_Contig146.114.2|organism=Pylaiella littoralis U1_48|type=CDS|length=585bp|location=Sequence derived from alignment at P-littoralis_Contig146:444365..448637- (Pylaiella littoralis U1_48)
ATGAAGTCTGTCTGCGTTGCTCTGGCTCTTGCGGGAAGCGCCTCGGCGTT
CATCGCCCCCATGGCGAACGTGCAGACGACTTGCAGCTCCTCCTCCTCCA
CCTCGTTGGCGATGTCCAGCGAACCCATGTCTCGATCGCAGGCGATCAGC
ACCCTCTTCGGCTCCACCGCCGCCGTCGTGGCGGCAGCATCCGTCCCGAG
CGCAGCCTTCGCAGACGGCGCCAAGTCTCTCGCCACCCAGTCCCGGGCGC
GAGGCATCTACGGCAACCGCATCGCCGCACTGCAGGGAGCGGTGGACAAA
GGAGACACGGCCGCCATCTTGAACGAGCAGAACGTCTTCCGTCTCTTCAA
CTCAGGGGTGTACTCCACCGACAAGGCCAAGTTCGCAGAGGCGGAAGAGC
TGGCCAAGGGCATCGTAACCTCAGCCAGCACCGGAGACGCTAAGGGTCTC
AAGGAATCGTTCGCGGCGTACATGAAGTTCACGGAGAAGAAGAGCGGCTT
CAGCGGCGCCGGCGACGGACAGGGCTTCGGATCTGAGTTCGACTACAAGA
ACAGGACACCCATGGGAACCGTCTACCAGAGGTAA