mRNA_P-littoralis_Contig146.89.6 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE) HSP 1 Score: 1366 bits (3535), Expect = 0.000e+0 Identity = 935/1316 (71.05%), Postives = 981/1316 (74.54%), Query Frame = 3
Query: 894 GAGKPKGPPMRYVCEIAKTGRAMCRRCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFKVATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEARGGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPC-KSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDIS---GRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXD-----------EKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAPGDVECPSCSEPLTVDLSGGSPGAE-DGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH 4793
GA K KG PMRYVCEIAKT RAMCRRCDEKITKGALK+GVVTEGSWGPSTQWHH+ CTVFKV T E+VEGYGDLDDA Q +LEQ+V+KSQ PDDLVRKEWT+KAKCPD +MATLLPYQAEGLAWMLNQEKL YKGGILADEMGMGKTLQAICTIVANRVNKKDKV QERWAKSEEEMG GGA KE+RGGTLVVCPTIALKQWQSELARFVKPG LKVVIHHG KRA+LAEDLT+ADVVLTTYAIVENEHRKAYAG+K+ CPDCG+TLYPDKMFVHRKYFCG+ AQRT+AQAKTQRK K + RRKD+G +KG G+D E+D A + + V+ + XXXXXXXXXXXXXXG++ D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTTDIS G+GK XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX +KEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDR+TSTAKAVFALTSLY+WCLTGTPLQNRVGELYSLVRFLRLDPHAFY+CRSK CDCKSL+YRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVG+GTILNNYAHIFDILIRLRQAVDHPYLVI+SATKREGMTPAMNS AGQNPT PAP XXXXXXXXXXX XXXXXXXXXXXX G DLCGICREPAER VSS+CGHSF PLTVDLSGG+PGAE D D XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA K R+AG +A LEASV+ K++T K G G+ KRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIE+RMHKG+VGCRKLSGHLS+DKREEVLQAFQ D GVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH
Sbjct: 206 GAHKTKGSPMRYVCEIAKTSRAMCRRCDEKITKGALKIGVVTEGSWGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTDKAKCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGILKVVIHHGAKRASLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASKGVAPWRRKDKGGKKGG-GTDTDNGTTRINVKINGEGGSATKKRGTASGKKAAESSEV--------------------------------------------------------------------------------EEDETATTEINVRVKVSPKAKRAXXXXXXXXXXXXXXGSSRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDW-GGTTDISKAKGKGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGGGAQAKKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRATSTAKAVFALTSLYRWCLTGTPLQNRVGELYSLVRFLRLDPHAFYQCRSKGCDCKSLNYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGAGTILNNYAHIFDILIRLRQAVDHPYLVIFSATKREGMTPAMNSAAGQNPTAVPAPPAETAPRGSQSRTSRSSTAQANGAATPNGGRSSCSSSSRTATAGTQADILGDTSSDSXXXXXXXXXXXAGXXXXXXXXXXXXVQECDSDGXXXXXXX---------DLCGICREPAERLVSSSCGHSFXXXXXXXXXXXXXXXXXXXXXXXPLTVDLSGGNPGAEGDDDXXXXXQRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAKSRVAGVMAALEASVKK-KTKTMKPAASGGDGV-KRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEFRMHKGQVGCRKLSGHLSVDKREEVLQAFQTDPGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH 1428
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA) HSP 1 Score: 736 bits (1899), Expect = 7.990e-237 Identity = 569/1276 (44.59%), Postives = 684/1276 (53.61%), Query Frame = 3
Query: 1041 TQWHHMQCTVFKVATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVMATLLPYQAEGLAWMLNQE-KLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMG---QGGA-LKEARGGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPCKSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKR---------DSAEPG----------VLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAPGDV--ECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
T WHH+ C V TA D+EGY DL + Q +L+++V +S+ PDDL+RK W +KA P ++++ LLPYQ EGL W+L+QE + ++GGILADEMG KT+QAI ++ANR + KDK W +E M G A RGGTLV+CP IAL QW++E+ RFV+ G L VV +HG RA L ADVVLTTYA+V+ ++R+ A K+ CPDCG+ LYPDK+F+HRKYFCGEGA+RT AQAKTQRK KG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX E D P +++K GK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T D++ XXXXXXXXXXXXX +K A D+ + G L +SW RI+LDEAH IKDRST TAKAVFAL SL K CLTGTPLQNRV ELYS +RFLR+DP A+Y C++K C CKSL YRFGPE R CEECGH P+ H FNR +LNPI R GY+GEG++AF+ LK EVLD ILLRRTK+ RS+DI LPPR+VRVR++RL E+EEDFYQALYTQSQAQFD YV +G +LNNYAHIFDILIRLRQA+DHPYL E GE CG+CRE E+PV++ CGH FCR+CV +L+ TA V ECP+CS+PLTVDL+ A++G G K + G + + R+V K S+IN+IDL KFQ+STK+EALM+E+H M + DP+AKAIVFSQFVNMLDL+E+R+ +G V C KLSGH+++ R+ VL+AF+ D VKVLLISLKAGGVALNLTVA++ FLMDPWWNPAAEMQAIDRTHR+GQFKPI+A RFIIEDT+EERI+KLQ+KK+LVFDSTVGGDA S +LTVDDLRFLF+
Sbjct: 2 TAWHHLACVVPHCNTAADIEGYDDLPEEQQQVLQERVDESRGQVDELYQPINPDDLIRKAWDKKAPQPPELLSPLLPYQLEGLGWLLHQELEEEHRGGILADEMG--KTIQAISLMLANRPHAKDKQQCSAWTAAEAGMEFPTLGNADTAPRRGGTLVICPLIALTQWRAEIERFVEDGGLSVVTYHGADRAKGTRGLADADVVLTTYAVVQADYRRMVAKRKVKCPDCGKALYPDKLFLHRKYFCGEGAERTAAQAKTQRK--------------------KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSLTTVLPPKKGAKAAEEAGGGAANPKGRAGKKGKAKANAESDEEAVATDMSDGSVESGD--------------------------ESDAPQQRQKKPR-------------------------------GKPNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAITEDVTDSDDAPVASKAAXXXXXXXXXXXXXXXXADEVTVLDVESSDDSAFEAPVQKKQKTAXXXXXXXXXXXXXXXXXXXXVSDAGKGGGVTRAVGPLSALHCVSWFRIILDEAHVIKDRSTGTAKAVFALCSLNKLCLTGTPLQNRVSELYSPIRFLRMDPFAYYVCKAKGCACKSLHYRFGPEGRKCEECGHNPMTHSCTFNRLVLNPIMRAGYIGEGRRAFITLKSEVLDKILLRRTKATRSDDIALPPRVVRVRRYRLSEKEEDFYQALYTQSQAQFDDYVNTGVVLNNYAHIFDILIRLRQALDHPYLAA-------------------------------------------------------------------------------------------------------------------------------ETGE----CGVCREQPEQPVTAECGHPFCRSCVVDLMTTAMEGVAMECPTCSKPLTVDLN-----ADEG---------------------------------------GRSKGKAVGTLRM-------------------------RNVQKKSIINKIDLAKFQTSTKLEALMQELHEMQQHDPSAKAIVFSQFVNMLDLLEFRIKRGGVQCVKLSGHMNVGARDVVLEAFKEDPDVKVLLISLKAGGVALNLTVASYCFLMDPWWNPAAEMQAIDRTHRMGQFKPIHAVRFIIEDTIEERILKLQDKKRLVFDSTVGGDAGSLARLTVDDLRFLFS 998
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: W7TXY3_9STRA (Snf2 super family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXY3_9STRA) HSP 1 Score: 740 bits (1910), Expect = 5.720e-236 Identity = 529/1292 (40.94%), Postives = 658/1292 (50.93%), Query Frame = 3
Query: 900 GKPKG---PPMRYVCEIAKT-GRAMCRRCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVFK--VATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEARGGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPC--------KSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDL----CGICREPAERPVSSACGHSFCRTCVQELIDTA-PGDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLV 4715
G PKG P R ++ ++ G+A C++C+ K+ K +++G+ + G +G T+W H+ CT+F + + E +EGY L + Q +++++V +S+ +LVRKEWT + + P+ ++ +LPYQ EGL WM QE++ + GGILADEMGMGKT+QAI ++ANR ++ + E W + E G+ R GTLVVCP IAL QWQ+E+ARF + G+L V+++HG R L ADVVLTTY+IVE E+RK + K+ C DCG+ YPDK+ +H++YFCGEGA T AQA+TQRK KS+ R +D + + G NKK GGK I GK S G+ XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX + + R A V+ E+SW RI+LDEAHFIK RSTSTAKAVFALTSL KWCLTGTPLQNRVGELYSLVRFLR+DPHAFY CR K C+CKSL+YRFGP W CE CGHTP+ H+A+FNRHILNPI R GY+GEG+KAFL LK E+LD ILLRRTK RS DI LPPR++++R +DEREEDFYQALYTQSQAQF+TY+ +GT+LNNYAHIFDILIRLRQAVDHPYLVI+S + T A AG PT S+DEE E D C +C EP E V + CG FCR CV E ++ + G CP CS PLTVDLS +G QE AG V V GK +G+ ++S+ ++RI L FQ+STK+EAL+EE++LM RDP+AKAIVFSQFVNMLDLI +R+ C KLSGH+S+ R++VLQAF+ D VKVLLISLKAGGVALNLT ANHI+LMDPWWNPAAEMQAIDRTHR+GQ+KPI+ATRFI+E+T+EERI+KLQEKKQLV
Sbjct: 98 GTPKGLPPPGQRIAYKVEESNGKATCKKCNAKVPKEEIRIGLEMNAGRFGIVTRWQHLPCTIFAEYLESEESIEGYEYLTEGQQALVKKRVAESREEEDEDSKPIDASELVRKEWTTQREPPETLVLPILPYQKEGLGWMYRQEQVEHHGGILADEMGMGKTIQAIAVMLANRPSE---LHSEAWTRQEASHGRAPDPC-MRAGTLVVCPLIALLQWQTEIARFTREGSLTVLVYHGSSREDAKALLQQADVVLTTYSIVEAEYRKMMSPEKVKCEDCGKRFYPDKLRLHKRYFCGEGAVLTAAQARTQRKGRSVKVGRLSKKSLRARHAQDDDETESDGGDSTVDDVKLGAVARTSKDGRLSKRVKSTKSKAQEGLTGRDTRSGAASSSGKDIKEDKYALIKAK-------------------------------------------------------------NKKLMAEAMGGKH----------------------SIGGKKVPQESSKASHSRRKVTGQTVGENDKKAFEAP--------------------SEDGENESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEDVKPRGKATRSVIHELSWFRIILDEAHFIKTRSTSTAKAVFALTSLNKWCLTGTPLQNRVGELYSLVRFLRMDPHAFYFCRMKGCECKSLNYRFGPNWDCCECCGHTPMWHFAHFNRHILNPIQRAGYIGEGRKAFLTLKNEILDPILLRRTKETRSEDIMLPPRLIKLRHDPMDEREEDFYQALYTQSQAQFNTYLQTGTVLNNYAHIFDILIRLRQAVDHPYLVIHSHARTN--TGAEGGTAG--PT------------------------------------------------------------------------------------------------------STDEEKELDDXXEEECALCHEPVENLVRAECGCGFCRLCVTEYLEASLGGTTSCPECSRPLTVDLS-----KREGQQEEEDASKGRAQSRTRRQNG------------------NGKHSNAAGTVCVA--------------GKLKLQGLDRKSI-----LHRIQLENFQTSTKLEALLEELYLMRTRDPSAKAIVFSQFVNMLDLIMWRLTVEGTKCHKLSGHMSVGARDKVLQAFKEDPEVKVLLISLKAGGVALNLTHANHIYLMDPWWNPAAEMQAIDRTHRIGQYKPIFATRFILENTIEERILKLQEKKQLV 1134
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: D7G7X0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X0_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 2.690e-207 Identity = 441/567 (77.78%), Postives = 454/567 (80.07%), Query Frame = 3
Query: 3096 RTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAPGDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKE-RMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH 4793
RTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNS AGQNPT PAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G + +Y SDEE E+SDLCGICREPAER VSS+CGHSF PLTVDLSGGSPGAE D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R+AGA+A LEAS++ +T K G G+ KRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIE+RMHKG+VGCRKLSGHLS+DKREEVLQAFQ D GVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH
Sbjct: 20 RTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSAAGQNPTPAPAPPAETTPRGSQSRTSRSSTAQANGAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEGGGKAAGAQNGAGAG-----------GRAGAQEYDSDEE-EESDLCGICREPAERLVSSSCGHSFXXXXXXXXXXXXXXXXXXXXXXXPLTVDLSGGSPGAEGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVAGAMAALEASMKXXXXQTMKPAASGGGGV-KRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEFRMHKGQVGCRKLSGHLSVDKREEVLQAFQTDPGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFAH 573
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A7S3MHT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHT9_9STRA) HSP 1 Score: 664 bits (1713), Expect = 5.070e-204 Identity = 529/1587 (33.33%), Postives = 683/1587 (43.04%), Query Frame = 3
Query: 927 YVCEIAKTGRAMCRRCDEKITKGALKVGVVTEGSWGPSTQWHHMQCTVFK--VATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEA---------------RGGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APCKSIFYRRRKDQGKQK-----------GKKG----------SDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKR--------------------------------------------------------KMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTT------DISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSS-ACGHSFCRTCVQELIDTAPGD--------------VECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLF 4787
Y+ E+AK+GRA C++CD KI +++GV+ +G WG T+W H+ CTVF + + E+++G+ DL+ + +++++ S PD+LVRK W + + ++ LLPYQ EGL WM+NQE+ GGILADEMGMGKT+QAI ++ NR + D WA S+ + R GTL+V PT+A++QWQ+E+ARF K G+L V ++HG R T A DLT D+VLT+Y I+E E+RKA AG K+ C C + YPDK+ VHRKYFCGE AQRT AQA TQ+K P + +++ +QK GK+G S XXXXXXXXXXX ++D ANKK+ + V+G +G A + +GKG XXXXXXXXXXXXX G D++ XXXXXXXXXX XXXXXX D ++A K+ +A VL +SW RI+LDEAH IKDRSTSTAKAVF LTSL KWCLTGTPLQNRVGELYSL+RFLR+DPHAFY CR+K C CKSL YRF + C++C H+ I HY +FN+HILNPI R+GYV +G++A L+LK++VLD ILLRRTK+ R+ DI LPPR+V VR +LD +EEDFY ALYTQSQAQF+TY+ SGT+LNNYAHIFDILIRLRQAVDHPYLVIYS + + N N A ++ G C +C EP+E PVSS +C H+FCR C+ + I + + CP C +PLT+ L SP G + + AV V A +E ++ + A + +++ S+++++DLN FQSSTK+EALMEE+H M D AKAIVFSQFVNMLDLI YR+ +G + C KLSG +S+++R++ + AF+ D VKV+LISLKAGGVALNLTVA+ IFLMDPWWNPAAEMQAIDRTHR+GQ KPI+ATRFIIE+T+EERI++LQEKK+LVFD TVGGD+ S KLTVDD+RFLF
Sbjct: 35 YIVEVAKSGRAECKKCDCKIENKCIRIGVIVDGEWGLFTRWQHLDCTVFHKGINSVEELDGFSDLNTQQKDLVKERFALSANEIDEDMEPIDPDELVRKAWEKPVEPSPNLLMPLLPYQKEGLGWMVNQEQNDVHGGILADEMGMGKTIQAIALMLQNRPDMSDFAQLREWAASDARHAAPAIADSSTSSTSSSSECPEPMVRCGTLIVLPTVAIRQWQTEIARFTKEGSLTVKVYHGSDRNTSALDLTKTDIVLTSYKILEIEYRKATAGTKVTCRVCQKKFYPDKLRVHRKYFCGESAQRTAAQALTQKKKARTGAKTSTTTPTRPDPSATKITKNNRKRPRNAFGVTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEIKSEPVETTKRVAALVKIKTEPGMEAMETSTVPISAAKTKKQTTSKQQKASATATMAPTKGKRGGPAQKSTAARSAYWPDIDEPDSPTSSDADDQHQGDHVVSSGSDLDAPTTSRPTQRGQKSPALAPTPARGRKTPPTSXXXXXXXXXXXAEPGTTSVTVTPLRAPTRRAAAQGQKKYTDDTRDSDFDVASSDEDVVANKKKGNNKQVKLMLAAEEAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVVKGRARGGAGNSRGKVTPAKKVVAPARSPANGKGRASPASSAKTTSXXXXXXXXXXXXXIKKATAGAKGKAAVGKKRPAAGNAQSDDDDDVAWESGSDNTAESSDDSXXXXXXXXXXXXXXXXXXXXGKNSNKAGSDDSEVERDIQQALLEAAAAQRRSKQGAA-VSVLHLVSWFRIILDEAHLIKDRSTSTAKAVFNLTSLNKWCLTGTPLQNRVGELYSLIRFLRVDPHAFYYCRTKGCCCKSLHYRFTKSY--CDDCHHSVIQHYCHFNKHILNPIKRSGYVADGRRAMLKLKQQVLDEILLRRTKTTRAEDIQLPPRVVTVRSEKLDVKEEDFYSALYTQSQAQFNTYLQSGTVLNNYAHIFDILIRLRQAVDHPYLVIYSEAQVAKQDDSENYLNLSNNNTNGNDAVKI---------------------------------------------------------------------------------------------KTESNGVSGGNCDLCHEPSEDPVSSTSCDHTFCRLCITDYIGSVSTSXXXXXXXXXXXXXGLRCPDCDQPLTIQLLPSSPSTTTGVASRGANRRSSSNG----------------------------RNGSSVAVDVSSGDGADAVTEDQQQQDSVSVWNATKGLSRKSILDKVDLNLFQSSTKIEALMEELHKMQSEDLGAKAIVFSQFVNMLDLISYRLQRGGLQCVKLSGSMSLEQRDKCISAFKADPDVKVMLISLKAGGVALNLTVASRIFLMDPWWNPAAEMQAIDRTHRIGQHKPIFATRFIIENTIEERILRLQEKKKLVFDGTVGGDSGSMSKLTVDDMRFLF 1497
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A1Y1IBP8_KLENI (Putative SNF2 family N-terminal domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBP8_KLENI) HSP 1 Score: 625 bits (1611), Expect = 5.110e-195 Identity = 448/1229 (36.45%), Postives = 567/1229 (46.14%), Query Frame = 3
Query: 1197 PDDLVRKEWTE-KAKCPDQVMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEARGG------------------------TLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPCKSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAPGDVE------CPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
PD + R+ + K + P +++ LLP+Q E LAW ++QE+ KGGILADEMGMGKT+QAI +V R KD A + + GQ A K+A TLVVCP +A+ QW+SE+ARF PG+LKV+++HGPKR E L+ D+VLTTY+IVE+EHRK +K C CGR YPD++ VH ++FCG A+++D A Q+K P +K KGK + FEDDP A K K A + XXXXXXXXXXXX +T SGKG GRG EAA V + + + L + W RI+LDEAH IKDR STAKAVFA+ S +KW L+GTPLQNRVGELYSLVRFLR+DP+A+Y C K CDCKSL YRFG +WR C++CGH+P+ H+ +N+++ NPI + GYVGEG+KA LRLK +VLD LLRRTK R+ D+ LPPR +R+ D RE DFY+ALYTQSQ+QF TYV SGT+LNNYAHIFD+LIRLRQAVDHPYLV++SAT A + AGQ E+ E +D+CGIC +PAE V +AC HSFCR C+ E + A GD E CP+C PLTVDL+G + A AVA +A S +KK + S++NRI+L FQ+STK+EAL EE+ LM E DP+AK +VFSQF +MLDL +R+ K + C KL G +S++ R+ ++Q F ND VKV L+SLKAGGVALNLTVA+ +FLMDPWWNPA E QA DR HRLGQ+KPI TRF+IE+T+EERI+KLQEKKQLVFD TVGG A + G+LT +DL FLF+
Sbjct: 180 PDQMTRRSGPQPKLEPPSEMLMPLLPFQKEWLAWAIDQERGSVKGGILADEMGMGKTIQAISLVVTARHLHKDSQPPPLSAAAVSKAGQ--ATKQACSAAAHQHASTSAGPSTSAPPLPKVKATLVVCPLVAVIQWRSEIARFTAPGSLKVLVYHGPKRNIDFEVLSQYDIVLTTYSIVESEHRKNVMPDKEECKWCGRKFYPDRLKVHLRFFCGPTARKSDKLALQQKKLP-----RNYKKSAAATKGKSPLE----------------------------------------------------------------------------------------------------------------EPFEFEDDPKAKLKGKAAASKPSKXXXXXXXXXXXXXPEDEELST---SGKGMPF-------------------------------------------------GRGGRRGVRFGRVTSTNLATAV--------------------------------EAAIDAVDEGPAASTEKSGFSALHSVQWARIVLDEAHSIKDRRCSTAKAVFAIQSEFKWALSGTPLQNRVGELYSLVRFLRMDPYAYYFC--KKCDCKSLDYRFGKDWRKCDDCGHSPLHHFCWWNKYVANPIKKFGYVGEGRKAMLRLKAKVLDSALLRRTKVERAADLALPPRCTLLRKDAFDPREADFYEALYTQSQSQFATYVDSGTVLNNYAHIFDLLIRLRQAVDHPYLVVHSAT-------APPASAGQ------------------------------------------------------------------------------------------------------------EKEEPNDVCGICHDPAEDAVVTACKHSFCRACLSEFVAGAGGDAETARGAGCPTCQRPLTVDLTGSA---------------------------------------------------QAAAVA-------TAASMSKK---------------RTSILNRINLGGFQTSTKIEALREEIALMTEDDPSAKGLVFSQFTSMLDLCHFRLEKAGIKCVKLDGSMSMEHRDRMIQDFTNDPDVKVFLMSLKAGGVALNLTVASRVFLMDPWWNPAVEQQAQDRIHRLGQYKPIQVTRFVIENTIEERILKLQEKKQLVFDGTVGGSAEALGRLTAEDLAFLFS 1015
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A6A4FBC3_9STRA (ATP-dependent helicase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FBC3_9STRA) HSP 1 Score: 624 bits (1608), Expect = 1.220e-192 Identity = 446/1324 (33.69%), Postives = 591/1324 (44.64%), Query Frame = 3
Query: 924 RYVCEIAKTGRAMCRRCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVFKVATAEDV----EGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVR-KEWTE---------------------KAKCPDQ-----VMATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEARGGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPCKSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAP--GDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRI-DLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
RY E A GRA C+ C++K+ L+VG+ + +G +T + H++CT + + E D ++ + ++Q K + P D R +E+ E K + P++ + ATLLPYQ E LAWM+ QE+ YKGGILADEMGMGKT+QAI ++ N + ++ T + AK G RGGTLV+CP +A+ QW+SE+ RFV+PG L V IHHG KR E + + D+VLTTY+I+E+E RK +K+ C CG+ PDK+ H KYFCG A++T Q K KK P K R A K+ D+ DEK K + K P L +I W RI+LDEAH+IKDR+ +TA++VF L S YKWCL+GTPLQNR+GEL+SLVRF+++ +A+Y C CDC+ L Y F P+ + C +C H+ I HY+ FN+ ++ PI GYV EGK A RL+ +VL ILLRRTK R++DI LPP++VR+R+ RLDERE DFY+A+YTQSQAQF+TYV SGT+LNNYAHIFD+LIRLRQAVDHPYLVIYS + PA+ P+ P + P +D ++ ED LC IC E E V++ C H FCR CV+E I++ P G+ CP+CS+PLTVDLS P AE G + A A +S RS K+ ++ S ++S+++RI D+N FQSSTK+EALM+E+ LM RDP+ KAI+FSQFVNMLD+I++R+ G V C KLSG++S+ R+ ++AF++D V LISLKAGGVALNLTVA+HIFLMDPWWNPAAE QAIDRTHRLGQFKPI ATRFII TVEERI+KLQEKKQL+F+ TVG + ++ +LT +DLRFLFA
Sbjct: 282 RYFIEYAANGRAKCKSCEQKLLASQLRVGISIRHSIFGDTTYYKHLECTAIGLKAGLEANKPKEEDPDTEEVGEKPTKKQKKKKKDGPIEGLSKLKPVDQTRAREYMERNDLEGVIDERLELSDDHFVKKGRMPEKDPSKFLTATLLPYQREALAWMVGQEESSYKGGILADEMGMGKTIQAISLMLEN-IREEGPSTSGKTAK-------GRKSSTVRGGTLVICPLVAVMQWKSEIERFVEPGHLSVYIHHGNKRLDSIEKIASYDIVLTTYSIIESEIRKTLGWSKVACKYCGKKYLPDKLITHNKYFCGPDAKKTALQDKQXXXXXXXXXXXXXXXXXXXXXLKK----------------------------------------------------------------------------------------------------------------------------PVQKPRGRATPRSKK----------------------------------------------------------------------------KDV----------------------------------------------------DEK--------KPTLQKAKGKSP--LHQIHWTRIVLDEAHYIKDRNCNTARSVFELKSTYKWCLSGTPLQNRIGELFSLVRFIQVKKYAYYHCN--VCDCQMLDYNF-PD-KKCAQCTHSAIQHYSYFNKKVVIPIQAYGYVAEGKLAIQRLQNDVLQHILLRRTKEGRADDISLPPKLVRIRKDRLDERENDFYEAIYTQSQAQFNTYVSSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSKSN-----PALQLPSSAAPLVEEQP----------------------------------------------------------------------------------------------FDTNAGSSPEDERLCTICHEYLEDGVTAKCEHEFCRECVKEFIESLPAGGEATCPTCSKPLTVDLS---PPAE--------------------------------------TNMGNIGNEAANA-----SSCRSPKA------------VSLSSFHRNSILHRISDINAFQSSTKIEALMQELELMRVRDPSGKAIIFSQFVNMLDIIQHRLQLGGVKCVKLSGNMSMAVRDRTIKAFRDDPTVTAFLISLKAGGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPIQATRFIIAGTVEERILKLQEKKQLIFEGTVGANVSAICRLTEEDLRFLFA 1174
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A484DZW1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZW1_BRELC) HSP 1 Score: 618 bits (1594), Expect = 6.080e-191 Identity = 443/1320 (33.56%), Postives = 586/1320 (44.39%), Query Frame = 3
Query: 924 RYVCEIAKTGRAMCRRCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVF---------------------KVATA---EDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQ-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--LQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAP--GDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRI-DLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
RY E A RA C+ C+ K L+VGV + +G +T + H++CT K TA E + G+ +L A Q + + + + DD K+ K P + + A LLPYQ E LAWM+ QE YKGGILADEMGMGKT+QAI ++ N+ +K K+ + A S++ + GGTLVVCP +A+ QW+SE+ RFV+PG L + IHHG KR L + + + DVVLTTY+I+E+E RK +K+ C CG+ PDK+ H KYFCG A++T Q K Q K P R++ G+ EDD ++ GR K + AK+ D+ + G L +I W RI+LDEAH+IKDR+ +TA+ VF L S YKWCL+GTPLQNR+GEL+SL+RFLR++ A+Y C CDC+ L Y F P+ R C +C H+ I HY+ FN+ ++ PI GYVGEGK A RL +VL ILLRRTK R++DI LPP++VR+R+ RLDERE DFY+A+YTQSQAQF+TYV SGT+LNNYAHIFD+LIRLRQAVDHPYLVIYS + PA+ P P + P + + ED +C IC E E + CGH FCR CV+E I++ P + CP CS+PLTVDLS +V+E V ++ A + T ++ K L S ++S+++RI D++ FQSSTK+EALM+E+ LM DP+ KAI+FSQFVNMLD+I++R+ G V C KLSG++S+ R+ ++ F++D+ V LISLKAGGVALNLTVA+HIFLMDPWWNPAAE QAIDRTHRLGQFKPI ATRFII TVEERI+KLQEKK+L+F+ TVGG A++ +LT +DLRFLFA
Sbjct: 267 RYYIEYAPNARAKCKSCEHKFGIQELRVGVNIRHSIFGDTTYYKHLECTAIGLKAGLAAVQVEEPSEVVNIDKKRTASENEPIMGFLNLRAADQERVCEYMARVDVEEIIDERLPLADDHFNKKCHMPEKQPSKRLTAILLPYQREALAWMVKQEASDYKGGILADEMGMGKTVQAISLLLENK--QKSKLIGNKSATSQK--------MQTVGGTLVVCPLVAVMQWKSEIERFVEPGHLSIYIHHGVKRFDLIKKIASHDVVLTTYSIIESEFRKTLGWSKVACKFCGKKYLPDKLVSHNKYFCGPNAKKTALQGKQQSKKP-------RKRAAGESS---------------------------------------------------------------------------------------------------------------------------EDDVENVLSEPSRIQ-----------------------------------------------------------------------------------KGRAK----------------------------------------------------SLAKMKDDLKEPTSQKTKGKSPLHQIQWTRIVLDEAHYIKDRNCNTARGVFELKSTYKWCLSGTPLQNRIGELFSLIRFLRVNKFAYYHCNK--CDCQMLDYNF-PD-RKCVQCTHSAIQHYSYFNKKVVIPIQAYGYVGEGKLAMQRLHNDVLQHILLRRTKEGRADDISLPPKLVRIRKDRLDERENDFYEAIYTQSQAQFNTYVSSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSKSN-----PALQIPNSAAPLVEEQP----------------------------------------------------------------------------------------------FRSNKTVSAEDERMCEICHEYVEDKALANCGHEFCRECVKEYIESLPIGAEATCPKCSKPLTVDLS------------------------------------------------SSVEE-------VRKSIKDEASALTSRSPKTLNLA----SFHRNSILHRISDVHAFQSSTKVEALMQELELMRAHDPSGKAIIFSQFVNMLDIIQHRLQLGGVKCVKLSGNMSMSVRDRTIKEFRDDSNVTAFLISLKAGGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPIQATRFIIAGTVEERILKLQEKKRLIFEGTVGGSASAICRLTEEDLRFLFA 1149
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A329RLI4_9STRA (ATP-dependent helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLI4_9STRA) HSP 1 Score: 616 bits (1589), Expect = 5.390e-190 Identity = 447/1325 (33.74%), Postives = 578/1325 (43.62%), Query Frame = 3
Query: 927 YVCEIAKTGRAMCRRCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVF-----------------------------KVATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVM-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---EDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAP--GDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRI-DLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
Y E A GRA C+ C++K L+VGV + +G +T + H++CT K A+ + G L A Q + + + K+ DD +K+ K P + + ATLLPYQ E LAWM+ QE+ YKGGILADEMGMGKT+QAI ++ N K T + AKS GGTLVVCP +A+ QW+SE+ RFV+PG L V IHHGPKR E + + D+VLTTY+I+E+E RK K+ C CG+ PDK+ H KYFCG A++T Q K QR KK PA K + A + D K+A M K S L +I W RI+LDEAH+IKDR+ +TA+ VF L S YKWCL+GTPLQNR+GEL+SLVRFL++ +A+Y C + CDC+ L Y F P+ + C +C H+ I HY+ FN+ ++ PI GYVGEGK A RL+ +VL ILLRRTK R++DI LPP++VR+R+ RLDERE DFY+A+YTQSQAQF+TYV SGT+LNNYAHIFD+LIRLRQAVDHPYLVIYS T PA+ P+ P + P + + EG ED C IC E E V + CGH FCR CV+E I++ P G+ C +CS+PLTVDLS P E+ + E S S++S N S ++S+++RI D++ FQSSTK+EALM+E+ LM RDP+ KAI+FSQFVNMLD+I++R+ G V C KLSG++S+ R+ ++AF++D V LISLKAGGVALNLTVA+HIFLMDPWWNPAAE QAIDRTHRLGQFKPI ATRFII TVEERI+KLQEKK+L+F+ TVG + ++ +LT +DLRFLFA
Sbjct: 287 YFVEYAANGRAKCKSCEQKFLAKQLRVGVDIRHSIFGDTTYYKHLECTAIGLKAGTAANQATDETGDEDVDNKPLKNKNKKKNADPIHGLSRLQAADQKRVREYMKKNDLNGVIDERLPLTDDHFKKKGRMPEKEPSKYLTATLLPYQREALAWMVGQEESSYKGGILADEMGMGKTIQAISLMLENVREK----TSGKAAKSRNS-------PTVHGGTLVVCPLVAVMQWKSEIERFVEPGLLSVYIHHGPKRLDSVEKIASYDIVLTTYSIIESEIRKTLGWAKVACKYCGKKYLPDKLVSHYKYFCGPDARKTALQNKQQRXXXXXXXXXXXXXXXXXXXLKK----------------------------------------------------------------------------------------------------------------------------PARKPKGRAKKN-------------------------------------------------------------------------------------------------------------------------------------DDGKKATL------QMAKGKSP----LHQIQWTRIVLDEAHYIKDRNCNTARGVFELKSTYKWCLSGTPLQNRIGELFSLVRFLQVKKYAYYHCNT--CDCQMLDYNF-PD-KKCAQCTHSAIQHYSYFNKKVVIPIQAYGYVGEGKLAMQRLQNDVLQHILLRRTKEGRADDISLPPKLVRIRKDRLDERENDFYEAIYTQSQAQFNTYVSSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSKTN-----PALQLPSSAAPLVEEQP------------------------------------------------------------------------------------------------FGTTTEGASFEDERACTICHEYMEDGVVAKCGHDFCRECVKEYIESLPAGGEATCSTCSKPLTVDLS---PRVEEVNPPSNE-----------------------------------------------ETSASSSRSPKAVNLS---------SFHRNSILHRISDVHAFQSSTKIEALMQELELMRARDPSGKAIIFSQFVNMLDIIQHRLQLGGVKCVKLSGNMSMSVRDRTIKAFRDDPTVTAFLISLKAGGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPIQATRFIIAGTVEERILKLQEKKRLIFEGTVGANVSAICRLTEEDLRFLFA 1169
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Match: A0A0P1AXV8_PLAHL (Nucleotide excision repair protein RAD16 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXV8_PLAHL) HSP 1 Score: 608 bits (1568), Expect = 2.390e-187 Identity = 437/1317 (33.18%), Postives = 561/1317 (42.60%), Query Frame = 3
Query: 927 YVCEIAKTGRAMCRRCDEKITKGALKVGV-VTEGSWGPSTQWHHMQCTVF------------------------KVATAEDVEGYGDLDDAVQPILEQQVIKSQXXXXXXXXXXXPDDLVRKEWTEKAKCPDQVM-ATLLPYQAEGLAWMLNQEKLPYKGGILADEMGMGKTLQAICTIVANRVNKKDKVTQERWAKSEEEMGQGGALKEAR-GGTLVVCPTIALKQWQSELARFVKPGTLKVVIHHGPKRATLAEDLTTADVVLTTYAIVENEHRKAYAGNKIPCPDCGRTLYPDKMFVHRKYFCGEGAQRTDAQAKTQRKAPCKSIFYRRRKDQGKQKGKKGSDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEDDPPANKKRKMAVRGGKQGXXXXXXXXXXXXXXXXXGATTDISGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGTTDISGRGKXXXXXXXXXXXXXXXXXXXXXAAGEXXXXXXXXXXXXXXXXXXXXXXDEKEAAFAKVLKDMMDKRDSAEPGVLQEISWQRIMLDEAHFIKDRSTSTAKAVFALTSLYKWCLTGTPLQNRVGELYSLVRFLRLDPHAFYECRSKACDCKSLSYRFGPEWRACEECGHTPIMHYANFNRHILNPISRTGYVGEGKKAFLRLKREVLDMILLRRTKSNRSNDICLPPRIVRVRQHRLDEREEDFYQALYTQSQAQFDTYVGSGTILNNYAHIFDILIRLRQAVDHPYLVIYSATKREGMTPAMNSPAGQNPTLTPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISRGYDYSSDEEGEDSDLCGICREPAERPVSSACGHSFCRTCVQELIDTAP--GDVECPSCSEPLTVDLSGGSPGAEDGDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVKERMAGAVAVLEASVRSAKSETKKNGKPLGRGMAKRSVTKHSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEYRMHKGKVGCRKLSGHLSIDKREEVLQAFQNDAGVKVLLISLKAGGVALNLTVANHIFLMDPWWNPAAEMQAIDRTHRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAASTGKLTVDDLRFLFA 4790
Y E A RA C+ C+ ++ G L+VGV + +G +T + H++CT K T + ++ L+ A Q + + + K+ DD K+ K P + + ATLLPYQ E LAWM+ QE YKGGILADEMGMGKTLQ I ++ N E+G G + GGTLVVCP +A+ QW+SE+ RFV PG L V IHHG KR + + + D+VLTTY+I+E+E RK +K+ C CG+ PDK+ H KYFCG A++T Q K Q K R+K G+ EDD K + G+ + + D+S +DK P L +I W RI+LDEAH+IKDR+ +TA+ VF L S YKWCL+GTPLQNR+GEL+SLVRFL++ +A+Y C + CDC+ L Y F P R C +C H I HY+ FN+ I+ PI GYVGEGK A RL EVL ILLRRTK R++DI LPP++VR+R+ RLDERE DFY+A+YTQSQAQF+TYV SGT+LNNYAHIFD+LIRLRQAVDHPYLVIYS + PA+ P P + P D +D+ LC IC E E V + CGH CR CV+E I++ P G+ CP+CS+PLTVDLS E++ A LE ++ + K SSTK+EALM+E+ LM RDP+ KAI+FSQFVNMLDLI++R+ G V C KLSG++S+ R+ ++ AF++D V LISLKAGGVALNLTVA+HIFLMDPWWNPAAE QAIDRTHRLGQFKP+ ATRFII TVEERI+KLQEKKQL+FD TVGG+ ++ +LT +DLRFLFA
Sbjct: 283 YFIEYAPNARAKCKSCERRLLAGQLRVGVNIRHSIFGDTTYYKHLECTAIGLKVGLAAKQAQLDAEVKDESRPLKTKTHDPIDRLSRLETADQEFVCEYMAKNDVDGVMDERLPLTDDHFIKKGRMPEKQPSKYLTATLLPYQREALAWMVEQEASDYKGGILADEMGMGKTLQTISLLLENV----------------REVGSGSKKSSSMVGGTLVVCPLVAVMQWKSEIERFVAPGHLSVYIHHGGKRIDSVKSIASYDIVLTTYSIIESEIRKTLGWSKVACKYCGKKYLPDKLESHNKYFCGPNAKKTALQGKQQNKKT-------RKKAAGE---------------------------------------------------------------------------------------------------------------------------TSEDDDQDFLKNSLRKNKGR------------------------------------------------------------------VYSRTKKTDDSKDVS-----------------------------------------------------------------IDKTKGKSP--LHQIKWTRIVLDEAHYIKDRNCNTARGVFELKSTYKWCLSGTPLQNRIGELFSLVRFLQVKKYAYYHCNT--CDCQMLDYNF-PN-RKCAQCTHPAIQHYSFFNKKIVIPIQAYGYVGEGKLAMQRLYNEVLQHILLRRTKEGRADDISLPPKLVRIRKDRLDERENDFYEAIYTQSQAQFNTYVSSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSKSN-----PALQLPIQAAPLVEELPI----------------------------------------------------------------------------------------------DLIECASSDDNRLCMICHESVEDGVVAKCGHESCRECVREFIESLPTGGEATCPTCSKPLTVDLS-------------------------------------------------FPVEKVTRAEKSLENEFSTSSNRLPKT----------------------------SSTKVEALMQELELMRLRDPSGKAIIFSQFVNMLDLIQHRLQLGGVKCVKLSGNMSMSVRDRMITAFRDDPSVTAFLISLKAGGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPVQATRFIIAGTVEERILKLQEKKQLIFDGTVGGNVSAICRLTEEDLRFLFA 1140 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.89.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig146.89.6 >prot_P-littoralis_Contig146.89.6 ID=prot_P-littoralis_Contig146.89.6|Name=mRNA_P-littoralis_Contig146.89.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1507bp MARATRAQGKITSSGTAKPAGTASAQGKASVGKKKKTIAKEEEAENCEEDback to top mRNA from alignment at P-littoralis_Contig146:326923..349663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig146.89.6 ID=mRNA_P-littoralis_Contig146.89.6|Name=mRNA_P-littoralis_Contig146.89.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=22741bp|location=Sequence derived from alignment at P-littoralis_Contig146:326923..349663+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig146:326923..349663+ >mRNA_P-littoralis_Contig146.89.6 ID=mRNA_P-littoralis_Contig146.89.6|Name=mRNA_P-littoralis_Contig146.89.6|organism=Pylaiella littoralis U1_48|type=CDS|length=4521bp|location=Sequence derived from alignment at P-littoralis_Contig146:326923..349663+ (Pylaiella littoralis U1_48)back to top |