mRNA_P-littoralis_Contig146.80.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig146.80.1
Unique NamemRNA_P-littoralis_Contig146.80.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: D7FUT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUT2_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 4.670e-110
Identity = 190/210 (90.48%), Postives = 193/210 (91.90%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALRK 1010
            MGNKVSLENELINLRLTSKQQQRGA+KCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSME            MDVERISKTMDSFEQQFEDMDVRAGYMENAM  STAMSTPQEQVDGLIQMVADEAGLELG++LDDAGPVSNKVPAKPAAA AA  AAGEEDELANRLAALRK
Sbjct:    1 MGNKVSLENELINLRLTSKQQQRGAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAA--AAGEEDELANRLAALRK 208
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A836C887_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C887_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.330e-76
Identity = 147/211 (69.67%), Postives = 169/211 (80.09%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVP-AKPAAATAAPVAAGEEDELANRLAALRK 1010
            MGNKVSLE ELINL+LT+KQ QR + KC K E AAKAK++ AI+ GN+EGA+I  QNAIREKNQSLN LRL+SRIDAVA+RLETA+RMKQV+KSM+GVV GM  ALK MDVERISKTMD FE+QFEDMDV AGYMEN+M ++TAMSTP +QVD LIQMVADE GLE+  +LDDAG V   VP A PAAA          D+L+ RLA LRK
Sbjct:    1 MGNKVSLETELINLKLTAKQMQRSSTKCNKAEAAAKAKVKVAIQKGNMEGAKIAAQNAIREKNQSLNYLRLASRIDAVAARLETAVRMKQVDKSMQGVVKGMRKALKTMDVERISKTMDQFEKQFEDMDVVAGYMENSMGATTAMSTPADQVDQLIQMVADEHGLEVASQLDDAGKVGAAVPQAGPAAA----------DDLSQRLADLRK 201
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A836CEV0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV0_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.910e-76
Identity = 146/210 (69.52%), Postives = 167/210 (79.52%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALRK 1010
            MGNKVSLE ELIN+RLTSKQ QR + KC KNE +AK +++ +I+ GN+EGA+I  QNAIREKNQ+LN LRLSSRIDAV+SRLETAIR KQ+NKSMEGVV GM SAL +MDVERIS TMD FE+QFEDMDV AGYMEN+M ++TAMSTP +QVD LIQMVADE GLE+G +LDDAG V   VPA      A    A E D LA RLA LRK
Sbjct:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPA------AQQQPAQEVDALAQRLADLRK 204
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BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S1Z7S6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7S6_TRICV)

HSP 1 Score: 232 bits (592), Expect = 5.070e-69
Identity = 129/209 (61.72%), Postives = 157/209 (75.12%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALR 1007
            MGNK+SLE+ELINLR+TSKQ QR A KC KNE AA  KL++AIK GN EGARIYGQ+AIREKNQ+LNC+R++SRIDAV+SR+ETA+RM QV  SM+GVV GM   L++M++E++S TMD FE QFED+DV+  YME AM+++TA STP EQVD LI MVADE  LELG    +AGPV  K P         P     +D+L  RLA LR
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKCEKNEKAALEKLKKAIKQGNAEGARIYGQDAIREKNQALNCIRMASRIDAVSSRIETAVRMNQVTSSMKGVVKGMEKGLQSMNIEQLSATMDKFESQFEDLDVKTQYMEGAMNATTATSTPAEQVDELITMVADENNLELGDAFAEAGPVGKKAPE-----VKQPEKESVQDDLEARLANLR 204
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BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S2L033_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L033_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.990e-67
Identity = 126/209 (60.29%), Postives = 161/209 (77.03%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALR 1007
            MGNK+SLE+ELINLR+TSK   R ++KC K+E AA  +L++AIK GN EGARIY Q+AIREKNQ++N LR++SRIDAVA+RLETAIRM  VNKSM+GVV GM   + +M++E +SKTMD FEQQFED+DV++GYME AM+++TA  TP +QVD LI+ VADE  LELG    +AGPV   VP++P    A      ++D+LA RLA LR
Sbjct:    1 MGNKISLEDELINLRITSKSMNRSSVKCKKSEKAALDRLKKAIKQGNTEGARIYAQDAIREKNQAVNHLRMASRIDAVAARLETAIRMDTVNKSMQGVVKGMSKGMASMNIEEMSKTMDKFEQQFEDLDVKSGYMEEAMNTTTATQTPADQVDHLIKYVADENQLELGDAFLEAGPVGTTVPSQPEKVAA------DKDDLAARLANLR 203
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S4MGQ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGQ3_9STRA)

HSP 1 Score: 227 bits (578), Expect = 5.600e-67
Identity = 130/209 (62.20%), Postives = 158/209 (75.60%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALR 1007
            MGN VSLE+ELINLR+TSKQ QR A KC KNE AA  KL++AIK+GN EGARIYGQ+AIREKNQ+LNC+R++SRIDAVASR+ETA+RM  V KSM+GVV GM   L +M+VE+++ TMD FE QFED+DV+  YME AM+S+TA +TP EQVD LI +VADE  L+LG+E  +AG V      K AA   A      ED+L  RLA LR
Sbjct:    1 MGNSVSLEDELINLRITSKQMQRSAKKCEKNEKAAIEKLKKAIKSGNPEGARIYGQDAIREKNQALNCMRMASRIDAVASRIETAVRMNTVTKSMKGVVKGMDKGLASMNVEQMASTMDKFEAQFEDLDVKTQYMEGAMNSTTATTTPAEQVDELINLVADENNLDLGEEFAEAGTVGKIKQPKEAAPAKA------EDDLEARLANLR 203
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S3JWC9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWC9_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.590e-67
Identity = 130/210 (61.90%), Postives = 164/210 (78.10%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALRK 1010
            MGNKVSL++ELINL++TS+Q    + KC K    AK ++++AI+ GN+EGARIY QNAIREKNQ+LN LR++SRIDAVA RLETAIR   ++K+M  VV GM SALK+MDVE+ISKTMD+FE+QFEDMDVRAGYMEN+M++STA +TP++QVD LI  VADE  L+L   LDDAG VS KVP +   +       G+ED LA+RL ALR+
Sbjct:    1 MGNKVSLQDELINLKITSRQMTSASKKCEKGARTAKNQVKKAIEKGNMEGARIYAQNAIREKNQALNYLRMASRIDAVAQRLETAIRTNDMSKAMGNVVKGMSSALKSMDVEKISKTMDAFEKQFEDMDVRAGYMENSMNASTASATPEDQVDSLISEVADEHQLDLSFALDDAGAVSTKVPQEQKQSE------GKED-LASRLDALRR 203
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: W7U1R3_9STRA (Snf7 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1R3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.100e-64
Identity = 127/210 (60.48%), Postives = 156/210 (74.29%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALRK 1010
            MGNK SLE+ L+NLRLTSKQ  RG+ KC  +E  A+ KL++AI++ N+EGARIY QNAIREK Q+LN LRLSSRIDAVA+RLE+AIRMKQV  +M G+V GM +ALK MDVE+++K MD FE+QFED DVR GY+E A++S+TA +TPQE VD LIQ  AD   LELG  LD+AG VS+ +PA  A AT         + L  R  ALRK
Sbjct:    1 MGNKPSLEDHLVNLRLTSKQMVRGSKKCESSEKDARNKLKKAIQSRNLEGARIYAQNAIREKTQALNYLRLSSRIDAVAARLESAIRMKQVTGAMAGIVAGMDTALKDMDVEKLAKVMDQFEKQFEDTDVRTGYLEGAIASTTASATPQEMVDSLIQETADAHNLELGTMLDNAGMVSDNLPAVEAQAT---------NNLEQRFEALRK 201
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S2WTG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTG4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 6.700e-64
Identity = 131/209 (62.68%), Postives = 159/209 (76.08%), Query Frame = 3 
Query:  381 MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDELANRLAALR 1007
            MG +VSLE+ELINL++TSKQ    + K  K      AK+++AI+ GN EGA+IY QNAIREK Q+LN LRLSSR+DAVA+RLETAIR +Q+NK+M GVV GMGSALK+MDVE+IS TM +FEQQFEDMDVRAGYME AM+SST+ +TPQE VD LI++VADE  LELG   +DA  V    PA+     AAP     +D+LA RLAALR
Sbjct:    1 MGARVSLEDELINLKMTSKQMISASKKSEKKHKENLAKVKKAIQQGNKEGAQIYAQNAIREKTQALNYLRLSSRLDAVAARLETAIRTQQINKAMVGVVQGMGSALKSMDVEKISATMTNFEQQFEDMDVRAGYMEGAMNSSTSSATPQEDVDSLIKIVADENQLELGAAFEDAA-VPTAKPAEAEQTEAAP-----QDDLAARLAALR 203
[Close]
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Match: A0A7S2GWE3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWE3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 4.110e-63
Identity = 123/211 (58.29%), Postives = 159/211 (75.36%), Query Frame = 3 
Query:  384 GNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVTGMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQEQVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEE---DELANRLAALR 1007
            G K +LE+ELINL++TSKQ QR A KC +NE AA  K+++AIK GN EGA+I+ Q+AIREKNQ+LNCLR++SRIDAVASRLETA+RM  +++SM GVV GM + L++MDVE++++TMD FE QFED+DVR  YM++AM+S+TA +TP +QVD LI MVADE  LELG+  ++AGPV  K P         P  A E    D+L  RLA LR
Sbjct:    5 GKKPTLEDELINLKITSKQMQRQAKKCERNEKAAIEKVKKAIKQGNKEGAQIHAQDAIREKNQALNCLRMASRIDAVASRLETAVRMNSLSQSMTGVVRGMSTGLQSMDVEKMAQTMDKFESQFEDLDVRTQYMDDAMNSTTASTTPADQVDSLIHMVADENELELGEAFNEAGPVGKKTPQ--------PTVAEETKATDDLEARLANLR 207
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUT2_ECTSI4.670e-11090.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C887_9STRA1.330e-7669.67Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CEV0_9STRA2.910e-7669.52Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1Z7S6_TRICV5.070e-6961.72Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2L033_9STRA3.990e-6760.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4MGQ3_9STRA5.600e-6762.20Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3JWC9_9STRA7.590e-6761.90Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7U1R3_9STRA3.100e-6460.48Snf7 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2WTG4_9STRA6.700e-6462.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GWE3_9STRA4.110e-6358.29Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:284586..289325 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FUT2
Preferred nameCHMP1A
PFAMsSnf7
Model size1923
Max annot lvl2759|Eukaryota
KEGG koko:K12197,ko:K16230
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000793,GO:0000794,GO:0000815,GO:0000819,GO:0000920,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005815,GO:0005856,GO:0006323,GO:0006355,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007049,GO:0007059,GO:0007076,GO:0007080,GO:0007088,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010256,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010824,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016363,GO:0016458,GO:0016787,GO:0019058,GO:0019068,GO:0019219,GO:0019222,GO:0019538,GO:0019904,GO:0019941,GO:0021549,GO:0022037,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023057,GO:0030117,GO:0030163,GO:0030261,GO:0030496,GO:0030902,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032509,GO:0032511,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034399,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0042058,GO:0042059,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045177,GO:0045184,GO:0045324,GO:0045786,GO:0045892,GO:0045934,GO:0046605,GO:0046755,GO:0046872,GO:0046907,GO:0046914,GO:0046983,GO:0048285,GO:0048475,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050000,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060255,GO:0060322,GO:0065007,GO:0070011,GO:0070013,GO:0070507,GO:0070727,GO:0070925,GO:0071103,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090169,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:0140096,GO:1901184,GO:1901185,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1902115,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1904896,GO:1904903,GO:2000112,GO:2000113,GO:2001141
Exons2
Evalue8.7e-118
EggNOG OGsCOG5491@1|root,KOG3232@2759|Eukaryota
Ec32 ortholog descriptionSnf7 vacuolar protein sorting protein
Ec32 orthologEc-06_000990.1
Descriptionvacuolar transport
Cds size633
COG categoryN
BRITEko00000,ko00001,ko00002,ko03000,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789687.8868523-UTR-P-littoralis_Contig146:284585..2854951680789687.8868523-UTR-P-littoralis_Contig146:284585..285495Pylaiella littoralis U1_48UTRP-littoralis_Contig146 284586..285495 -
1680789687.927095-UTR-P-littoralis_Contig146:288945..2893251680789687.927095-UTR-P-littoralis_Contig146:288945..289325Pylaiella littoralis U1_48UTRP-littoralis_Contig146 288946..289325 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789687.9007297-CDS-P-littoralis_Contig146:285495..2858581680789687.9007297-CDS-P-littoralis_Contig146:285495..285858Pylaiella littoralis U1_48CDSP-littoralis_Contig146 285496..285858 -
1680789687.9143138-CDS-P-littoralis_Contig146:288675..2889451680789687.9143138-CDS-P-littoralis_Contig146:288675..288945Pylaiella littoralis U1_48CDSP-littoralis_Contig146 288676..288945 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.80.1prot_P-littoralis_Contig146.80.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig146 285496..288945 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig146.80.1

>prot_P-littoralis_Contig146.80.1 ID=prot_P-littoralis_Contig146.80.1|Name=mRNA_P-littoralis_Contig146.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MGNKVSLENELINLRLTSKQQQRGALKCTKNENAAKAKLREAIKAGNIEG
ARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVT
GMGSALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMSSSTAMSTPQE
QVDGLIQMVADEAGLELGQELDDAGPVSNKVPAKPAAATAAPVAAGEEDE
LANRLAALRK*
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mRNA from alignment at P-littoralis_Contig146:284586..289325-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig146.80.1 ID=mRNA_P-littoralis_Contig146.80.1|Name=mRNA_P-littoralis_Contig146.80.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4740bp|location=Sequence derived from alignment at P-littoralis_Contig146:284586..289325- (Pylaiella littoralis U1_48)
GAGGACAGGACAGCCAGCACCCAAACACAAAACAAACTCGGCGTACACCC
GTGATCCTCGTGCTTCGTGCTCCGCATCCCACTCATCGAAGCACGCCCTT
ACTCTTGGCAGTACGACCTTATCCATAGCTGAGAGGAACGCGAAGGAGCC
CTGCTGGATTCGGTGTGCAAGCGACTAAATCAAAGCTCTCCCCCGAGGAC
GGAACAAAACTGCAACTCCCCGAGTTTACATTTTAGACTCAGGCGAACGC
CGTTGTCAACGAAAGAGAGCAAGAGCACATCCACTGCAGATACAGCAGAA
GCTTTGTCGTGTTCTGGTACGTGCGGGAAGAGAAAAATAACCGTTAGTCA
GCAGCCCCGCGCGAAGCAGCAGAAGCAGAGATGGGAAACAAAGTGTCGCT
GGAGAACGAGCTCATCAACTTGAGGCTGACCTCGAAACAACAGCAAAGGG
GTGCCCTCAAGTGCACGAAAAATGAGAATGCGGCGAAAGCCAAGCTCCGA
GAGGCGATCAAGGCCGGCAACATCGAGGGAGCCCGCATCTACGGCCAGAA
CGCGATTCGAGAAAAAAATCAATCTCTAAATTGTCTACGACTCAGTAGTC
GAATAGATGCCGTGGCATCCCGGCTGGAGACGGCGATTCGGATGAAGCAG
GTACGATGATGAGACGAGAGTGTGATTTTTTCATTGCACACACACAACAC
ACACAACCGCTGCATTATAAAAACGAATCAGATATCATACGCAGAGTACT
TCGTACAAGTATGATTTTGGAATGCTGACGAAAGCGGCCGGACTGCTGCA
GACTGGTGCATGATAGATCTGGCTTCGTACAACGTACGTAGTGAGGTCCG
GTCAACTGTTTGAACTTTGGACAACCTATGTACATGTATACCGTGGGTTT
GATGTTGCACGCCTGAAATCGTCGTGAAATTGTTCCAAAACGTTCACATT
GTCCTTTCATGATCTGATATTATACAAGCATGTACAGCAGAACTTCACAC
AACAGTATAACGAAGTGTATAACATGACAATCAAATTTGTTTCCTCTTAT
CATATCATCGCAGATTTTTTTTTTTTCGCTCAGTTCTCCACTTTCCTCCG
CGCTCCGTTCTCACACGGCGGCATGATACTGTAGCAGATATTGGTGTTTT
CCGTGCTCCGAGTACGTGTATATTGTGGGCCTTTTCGGGCAGACTACTTC
ACTGTTGTAGTTCCGTGTAGGACATGAGCTTGGCAGCTGGAACTAAAGAG
TGACAGAGTCATTGGTACTACAACACATTCAAGCAACAGGGAAGAGGGCG
AGGGACAGTTGAACCCTTCTCGCGATAAAAAGCTGACAAGCAACAGACGA
GCCTCCCTGAAAATGGTTGAAGGAAAAAATAGCAACTCCATTTTGACCTT
CCTCCTGTGTGAACCCGGCTGGTGCACCCACTTCATCTGAAAGGTGTAGA
CTGATGCCCATAGTCAATTGGATATGAACACTCACATAGCAGCAGTAGGC
TGTTTCGTAGCTCTCTTTTCACGCCACATGTACTGCACCTGTATCCTGGG
ATAAAAGAAACGCAAAATATGGGCAGTTCCTCGGCTTCTGTGTGTGAAGT
AAGAAAGTAGAGCTTGGATACCGGTACAAGCAGGTCACTTGTACTGGACC
GCGACTAGTATACCTTCCCCACGTAGGGAGGAGCTACGATGGAAAACCGT
TCGACGCCGTGCACATAAGTTTACTGATCCAGCTGACACTATTCTGATCC
TGTTGGGAAAGTCTGGGTTGACGTGTGCACTGGAGAGGAAGCACGTACAT
GGAAGCACGTTCGCCGTTCTCCACAACAAATCTAGCACACGTCTCAACGT
TATCTAACTTGGGACCCGATTCTGATCAGCACCACGGCGCCGTATGTGAG
GATCAGGGTTTGGCCTTCATGGCTTTTCCTCACGAGGACGTGTACAGCCG
ACTGCAGAGCTCTATCATTCGCACAGACCGTCCCGTGAGCATCGCGCTTG
CCTTATGGGGGGTCCAGTGTCTGGTGGCGGTGGTATTACCCTCTGAACTT
ATTTCTAGGGGAGGTTCAGGGGGAATGGGGTCTCAGAGAGATTTTCGCAA
AAATTGACACGAAGCTTACCGTTTTTTGTTTTATGAATCACTTCGGATAT
CGGAATCCTATATACTTCGTATAAAACAGGCACTAGTATCTGGCAACGAA
ATCAAATTCGAAACAGCATCGTGCATAGTGTTCGGTGTATTATTTTTCAA
GTTCATCACGAACACATCAATGACGTGTTCGCCTCTCCCCGGACGAGGAT
CTGGAGTAGATTAGCAACGAACACAACGAAAAAGTAACATCTCATCAGAT
AATGTTCGGTTGCAGCTCCCCTTGAGGTTGTCAGGCTCAATAGTATTCAA
GGAAAACCCAGCCGCTACTGCCTAAGAAAGTGAAGATTGCTGAGTTTCTA
GACAACACCCACATGTGCTGCTTTGGGTGTTTGTTTTTTTTTATACCGAC
AAAAGCTTTGGGCGGGTACCACGTGACGAAACTCTGAGCCACTCTCAGAT
TTGTGAATTTGTGCTGCGAACACCATTCGGGGTCATGACCTTTGTCGCCG
GTAGTGCTCCTCACACAGACCCCGACTCGCTACGATATCGGCGGGAGGTC
TCAAGAGGACCGTGTTCTACCTTTTCCAGTAGTCGATATGCTCTGGTTTT
TCTGTGCGTCCGGAGCTTCTTTGTAGCTCTTAGGAGACAAACTTCGTGCC
AAGGTCGTGCACTCGTTGTTGAACTAAACAGGCTGAAACTCGCAGGGTGT
GTACCTTGGTGGATGTACCACCCAATAAAAGTTGGTAAAATTTGGGATCA
GCACTACAGCGCTGACGATGGGCTTGCAAAAGTTGCCTTAAATCGACCCA
AACCACTCTGAACTCCAGTAGTTTACAATAAAGATTTTATGCTCGTTCAA
CAAATTGTCTACCTTTAAAAATGTAGCCAGCATTTCACCGTTTCGTGCTT
CAAATAAACTCTAGATCAAAAGTTGTGCACTCGTAGATTCACCAAATCGA
CTGAAACTCGGAGGGTGTATAGCTTGGTCGATGCACTCCCCAAAAAACGT
TGGTATAATTTTGGATCAGCACTGCAGCTCGCGAACCAGCAGACTGACGT
GCATGTGTCATAGAAAAATCGACGCTGGGGGCTCCGTGCAATAACAATTT
TTTGTCGCTGTAAAAACAAAAAAATGGCGATTTTTCTACAGGCAGCAGCA
CATGTGCACCGCGCCAACCATTTTGTGGGAAAAAAGAAAACCAAGCCGCG
GCACCGACAGAGGGCAAGGCACGTTATTTTGCGCGCGAAGTCCGCCGCCT
CTCCTCGAGCGCCTCTCGCGTCGAAAAAAACTTGAAACTCGTTGGTCCCG
TGCTGAACAAATATCTCCGCAACATCCCTTGCGCCCGCACTCAACACCAC
CCTCTCTGGTGCTGTAGGTGAATAAGTCGATGGAAGGAGTGGTTACGGGC
ATGGGGTCGGCGCTCAAGGCGATGGACGTTGAGCGCATCTCAAAAACCAT
GGACAGCTTTGAGCAGCAGTTCGAAGATATGGACGTGCGCGCGGGGTACA
TGGAGAATGCCATGAGCTCCAGCACGGCCATGTCCACGCCTCAGGAGCAA
GTTGACGGCCTCATCCAGATGGTAGCCGACGAGGCTGGCTTGGAGCTGGG
CCAAGAGCTGGATGACGCTGGACCTGTGTCCAACAAGGTGCCGGCCAAAC
CCGCGGCTGCCACGGCTGCGCCGGTCGCCGCTGGCGAGGAAGATGAGCTA
GCGAATAGGTTGGCCGCCCTGCGTAAGTAAGGAAGCAGCGTGCGTTCGCG
CTGATTGAGAGGGGCTGGAGCTGTTGTGAGCAGTGCTGCCTGTCGCCGAA
TACTTTGGTTTTGTGGCAGGGGTGTGCGACTACTGCTCGCTTATGTGCTT
GTAGAAATAGCAGTACCTATTACGAGACATACGGACGGCTTGAGGGCGAA
TGGGCTCTCAGCAGAAACAATCGGATGCCTGCCGAGGCACGAGTGTTCCT
GTGCTGCAAAAGGTTAAAGAGTATAATAAGTAAGGCGTGTGCATAGAGCT
AGCTCCTCAGTTGTTTCATGCTGTCGCGATTTCAATTTTTCGTTTCTTGA
TTTATATTGCGATGTTAGATCTAAGCAGCAGCAGGTACCATGCGTTTCGC
AAATTGTGTGAAGCTGAGGTCCCTGCACTAAGGCTGTCAGCAGCGCTATT
TCCTGCGTACTCACGGGTTGCTGGATTGCAGCAGTACTTTGGTTCGAAGC
GGACCATTGAGAAGGTTGGTCAGAGAATACGGTGAAATGAGACGTCTGCT
GCTTCCAAATATACGTGGTTCGGGCCCCGTGTGTAAATGATAATGATTCC
ATGTGCCAATAGGAAGGTTTGTTTGCCTGCGTGCGTTTCGGATTTTCTAA
TCCTTTGGAAGCTGACGTAGCAATCCTTCTGTGCCGTCCTTATATATTGT
TGCCCGTGCGCAACGCCATTTCCATGACGATCGTCGTATCGTCGTGCTCA
AGCGGGTGCGGTTGTTTTGGTCCGACGGGCTCGAACAACATATAGATGTC
ATTCGTGTGTCATGATGGTCGTAGTGTTGAGACCAATAAGACATTTACCC
AGCGTTTGCCTGGGCTATCGGATAACCTCTGTTGTTATTTCGCCGCAAGG
CGTTTTGACCAATCAAAAAAGTGCGTGCCACCTCTTCCGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig146:284586..289325-

>mRNA_P-littoralis_Contig146.80.1 ID=mRNA_P-littoralis_Contig146.80.1|Name=mRNA_P-littoralis_Contig146.80.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig146:284586..289325- (Pylaiella littoralis U1_48)
ATGGGAAACAAAGTGTCGCTGGAGAACGAGCTCATCAACTTGAGGCTGAC
CTCGAAACAACAGCAAAGGGGTGCCCTCAAGTGCACGAAAAATGAGAATG
CGGCGAAAGCCAAGCTCCGAGAGGCGATCAAGGCCGGCAACATCGAGGGA
GCCCGCATCTACGGCCAGAACGCGATTCGAGAAAAAAATCAATCTCTAAA
TTGTCTACGACTCAGTAGTCGAATAGATGCCGTGGCATCCCGGCTGGAGA
CGGCGATTCGGATGAAGCAGGTGAATAAGTCGATGGAAGGAGTGGTTACG
GGCATGGGGTCGGCGCTCAAGGCGATGGACGTTGAGCGCATCTCAAAAAC
CATGGACAGCTTTGAGCAGCAGTTCGAAGATATGGACGTGCGCGCGGGGT
ACATGGAGAATGCCATGAGCTCCAGCACGGCCATGTCCACGCCTCAGGAG
CAAGTTGACGGCCTCATCCAGATGGTAGCCGACGAGGCTGGCTTGGAGCT
GGGCCAAGAGCTGGATGACGCTGGACCTGTGTCCAACAAGGTGCCGGCCA
AACCCGCGGCTGCCACGGCTGCGCCGGTCGCCGCTGGCGAGGAAGATGAG
CTAGCGAATAGGTTGGCCGCCCTGCGTAAGTAA
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