mRNA_P-littoralis_Contig146.58.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5J5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V5_9PHAE) HSP 1 Score: 223 bits (568), Expect = 5.910e-71 Identity = 108/150 (72.00%), Postives = 125/150 (83.33%), Query Frame = 1
Query: 133 MQPREFRKLYKMLRGRLQ*----GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQ 570
M P+EF+ LY+MLRGRL+ G+GHNGT+AGEWALA TL+WLAGHGVSAAADGP+MA STA+AKIK G+DAI+ GRLRIKWPR + EL+ + F AR SQLDPVLK CVGAL+G+L+RR KPSI EHP P RFFSGHKMTVGMNYQ
Sbjct: 1 MSPKEFKGLYEMLRGRLECHGPEGRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDYGRLRIKWPRKERELQAKAQRFAARRSQLDPVLKRCVGALNGLLVRRKKPSITEHPYPHRFFSGHKMTVGMNYQ 150
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 186 bits (472), Expect = 3.880e-53 Identity = 101/240 (42.08%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 43 RGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQ*----GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
R V R R+ W +P+V+DG+F+ RFRM EF L MLR +L+ G NG + E+ LA L++LAG V DG +A STAYA + IDAI+ L WP ++ L + +R RS+ + V++ CVGA+DG+ +R T+PS++ H P F+SGHK GMN+Q +C+ARY +IA N PGS NDR A++ + F T++++LP Y++GDAAY A+++++VPY
Sbjct: 42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDAL-DQCGMYRRRST--NGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPY 278
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 182 bits (463), Expect = 9.840e-52 Identity = 100/243 (41.15%), Postives = 144/243 (59.26%), Query Frame = 1
Query: 31 ASPRRGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQ*----GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVP 747
A RG V R R+ + +RP+VED +F+ RFRM +F L +LR +LQ G NG + E+ LA TL++LAG V D +A STAYA + IDAI+ +L KWP D+ + +R RS+ + V++ CVGA+DG+ +R P +K H P F+SGHK GMN+Q IC+A Y +I N PGS NDR A++ + FD L+ +P +++GDAAY A+N+++VP
Sbjct: 42 APAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDD-AEAQAELYRRRST--NGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVP 281
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.220e-41 Identity = 83/198 (41.92%), Postives = 120/198 (60.61%), Query Frame = 1
Query: 157 LYKMLRGRLQ*GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
L L+ Q G NG + E +A TL+WLAG + DG +A STAY I+A+++C L KWP ++ R + FR RSS V++ CVGA DG+ +R KPS KE P+ +++GHK GMN+Q +CDA+Y ++A N PGS NDR A+ + FD L+ LP ++V+GDAAYGA+ +++VP+
Sbjct: 77 LRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARA-AELFRNRSSM--DVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPF 271
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 153 bits (387), Expect = 8.520e-41 Identity = 92/240 (38.33%), Postives = 138/240 (57.50%), Query Frame = 1
Query: 43 RGACVERSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYKMLRGRLQ*----GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
R V R R+ ++ I+P+++D +F RFRM+ +FR L LR LQ G NG + E+ +A TL+WLAG + DG +A STAY I+A+++C L KWP E+L E S F A ++ +D V++ CVGA+DG+ +R KPS KE P+ +++GHK GMN+QV S NDR A+ + FD L+ LP ++V+G+AAYGA+ +++VP+
Sbjct: 46 RSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPS-FSATAALMD-VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQVC----------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPF 266
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5KV00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV00_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.610e-40 Identity = 68/98 (69.39%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 133 MQPREFRKLYKMLRGRLQ*----GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGF 414
M P+EF+ LY+MLRGRL+ G+GHNGT+AGEWALA TL+WLAGHGVSAAADGP+MA STA+AKIK G+DAI+ CGRLRIKWPRT+ EL+ + G
Sbjct: 1 MSPKEFKGLYEMLRGRLECHGPEGRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDCGRLRIKWPRTERELQAKAQGL 98
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 114 bits (285), Expect = 4.970e-27 Identity = 52/113 (46.02%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 412 FRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPCPDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
F A ++ +D V++ CVGA+DG+ +R KPS KE P+ +++GHK GMN+Q +CDA+Y ++A + PGS NDR A+ A FD L+ LP ++V+GDAAYGA+ +++VP+
Sbjct: 8 FSATAALVD-VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPF 119
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5J641_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J641_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 6.420e-22 Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 568 QVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
QVICDA Y V AACCNTPGSTN R AY+EA FD LVE LPG Y V+GD AYGAT+KM+VPY
Sbjct: 3 QVICDADYIVTAACCNTPGSTNVRQAYKEAEFDQLVEGLPGNYDVVGDTAYGATDKMLVPY 63
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6A3JEK8_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JEK8_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-19 Identity = 72/236 (30.51%), Postives = 116/236 (49.15%), Query Frame = 1
Query: 61 RSRQEWKDVIRPLVEDGSFKTRFRMQPREFRKLYK----MLRGRLQ*GKGHNGTVAGEWALAGTLQWLAGHGVSAAADGPNMANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVGALDGVLIRRTKPSIKEHPC--PDRFFSGHKMTVGMNYQVICDARYTVIAACCNTPGSTNDRLAYREANFDTLVESLPGKYYVLGDAAYGATNKMIVPY 750
R R +W V+ L+ +G F+ RM P F +L + +LR RL+ + ++ + + +++LAG + ++S AY+ ++AI +L I +P + + ++ F+ARS + V V ALDG L PS + P +FSGH M G+N Q CDA + PG TND AY E++ ++E L YV+ DAAY ATN+++ P+
Sbjct: 33 RPRLDWDRVVERLLLEGEFERVNRMSPSSFNRLCRAVVPVLR-RLEHSWLESQGISMKNKIHLAVRYLAGGAIDDIRRVIGSSHSYAYSITVSVMEAIADAPKLGITFPLSSTQCSLAAAAFQARSEE--GVFNGYVAALDGWLCHIKAPSELDAGSVGPRLYFSGHYMHYGINVQACCDAFSRFVFIEATHPGGTNDARAYGESDLAAVIERLGRGLYVVADAAYTATNRLLTPF 265
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Match: A0A6H5KXS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS3_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 3.790e-19 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 292 MANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPVLKHCVG 462
MA STA+AKIK+G+DAI+ CGRLRIKWPRT+ EL+ + GF ARSSQLDPVLK G
Sbjct: 1 MATSTAFAKIKEGLDAINDCGRLRIKWPRTERELQAKAQGFAARSSQLDPVLKRYKG 57 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig146.58.1 >prot_P-littoralis_Contig146.58.1 ID=prot_P-littoralis_Contig146.58.1|Name=mRNA_P-littoralis_Contig146.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp MANSTAYAKIKDGIDAIDSCGRLRIKWPRTDEELRENSSGFRARSSQLDPback to top mRNA from alignment at P-littoralis_Contig146:189737..191342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig146.58.1 ID=mRNA_P-littoralis_Contig146.58.1|Name=mRNA_P-littoralis_Contig146.58.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1606bp|location=Sequence derived from alignment at P-littoralis_Contig146:189737..191342+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig146:189737..191342+ >mRNA_P-littoralis_Contig146.58.1 ID=mRNA_P-littoralis_Contig146.58.1|Name=mRNA_P-littoralis_Contig146.58.1|organism=Pylaiella littoralis U1_48|type=CDS|length=459bp|location=Sequence derived from alignment at P-littoralis_Contig146:189737..191342+ (Pylaiella littoralis U1_48)back to top |