prot_P-littoralis_Contig146.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig146.27.1
Unique Nameprot_P-littoralis_Contig146.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length101
Homology
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.680e-35
Identity = 71/97 (73.20%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    1 MVSVAGERLEGGRPAERLHHAGAHRPGRDKVR-PTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQYTMI 96
            M +VAGERLE G PAER+HHAGA R  R+K+R PTPVQGFA+DQLKEV++S  VD TQKGKSP PSFD+ MQLVDRG RGVE AWVR RNVDQY  +
Sbjct: 1025 MATVAGERLEDGSPAERVHHAGACRLEREKMRRPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPSFDKTMQLVDRGGRGVEWAWVRRRNVDQYVSL 1121          
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 9.830e-22
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    1 MVSVAGERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQY 93
            + S+AGERL+GGR       AGAH  G  +  P+PVQGF ++ LKEV+KS  VD   +G+SPFPSFD  M LVDRG RG E AWVRT+N+DQ+
Sbjct: 1157 VASIAGERLDGGRAEGLPQGAGAH--GAQQGWPSPVQGFTYETLKEVIKSFEVDGM-RGRSPFPSFDAKMHLVDRGGRGEEWAWVRTKNIDQF 1246          
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.600e-20
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    1 MVSVAGERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQY 93
            M S+AGERL+GG   E L   GA R G  +  P+PVQ FA+D LKEV+K   V    + +SPFPSFD  M+LVDRG +G E +WVRT+N+DQ+
Sbjct:  881 MASIAGERLDGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEV-ANMRDRSPFPSFDVKMRLVDRGGQGAEWSWVRTKNIDQF 972          
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 5.540e-20
Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 MVSVAGERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQY 93
            + S+AG+RL+GGR     H AG H  G  +  P+P+QG  ++ LKEV+KS  VD   + +SPFPSFD  M+LVDRG RG E AWVRT+N+DQ+
Sbjct:  870 VASIAGDRLDGGRAEGLPHGAGGH--GAQQEWPSPMQGITYETLKEVIKSFEVDGM-RHRSPFPSFDVKMRLVDRGGRGAEWAWVRTKNIDQF 959          
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: A0A6H5L6V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V0_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 8.870e-20
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 MVSVAG---ERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQY 93
            M S AG   ERL+   P+ERL HAG    G  K  PTP++GF +D+LKEVVKS  VDRTQ   + +PSFD  M++VDR   GVE AWVR  ++D++
Sbjct:   71 MTSKAGNRLERLQNSGPSERLPHAGVRGDGAQK--PTPLEGFDYDKLKEVVKSFEVDRTQGDGTRYPSFDTTMKIVDRHGGGVEWAWVRNGHIDKF 164          
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.350e-18
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    7 ERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKSSVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQY 93
            +RL+   P+ERL HAG    G   +   P++GF +D+LKEV+KS  VDRTQ+  S +PSFD  M +VDR   GVE AWVR RN+DQ+
Sbjct: 1052 DRLQNSGPSERLPHAGVRGDGMQTL--IPLEGFDYDKLKEVIKSFEVDRTQRDGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQF 1136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLG1_ECTSI1.680e-3573.20LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI9.830e-2256.99LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE1.600e-2053.76Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE5.540e-2052.69Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L6V0_9PHAE8.870e-2052.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUH6_ECTSI4.350e-1851.72LRR-GTPase of the ROCO family, incomplete sequence... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:131008..132870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.27.1mRNA_P-littoralis_Contig146.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig146 130948..142134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig146.27.1 ID=prot_P-littoralis_Contig146.27.1|Name=mRNA_P-littoralis_Contig146.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=101bp
MVSVAGERLEGGRPAERLHHAGAHRPGRDKVRPTPVQGFAHDQLKEVVKS
SVVDRTQKGKSPFPSFDEAMQLVDRGRRGVERAWVRTRNVDQYTMISRAA
*
back to top