prot_P-littoralis_Contig146.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig146.18.1
Unique Name	prot_P-littoralis_Contig146.18.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	146

Homology

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BLAST of mRNA_P-littoralis_Contig146.18.1 vs. uniprot
Match: A0A6H5JMD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD7_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 2.870e-92
Identity = 141/146 (96.58%), Postives = 142/146 (97.26%), Query Frame = 0

Query:    1 GLSASAGSGSVVGDKRPSVQPSCDKGDASCKGVESIDEANQPPRKRVKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 146
            GLSASAGSGSVVGDKRPS QPSCDK D+SCKGVESID ANQPPRKRVKRGTFSVDL PLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ
Sbjct:  194 GLSASAGSGSVVGDKRPSAQPSCDKRDSSCKGVESIDAANQPPRKRVKRGTFSVDLTPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 339

[Close]

BLAST of mRNA_P-littoralis_Contig146.18.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.800e-85
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0

Query:    1 GLSASAGSGSVVGDKRPSVQPSCDKGDASCKGVESIDEANQPPRKRVKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 146
            GLSASAGSGSVV DKR SVQPSCDKGDASCKGVESIDEA+QPPRKR+KRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ
Sbjct: 1649 GLSASAGSGSVVSDKRSSVQPSCDKGDASCKGVESIDEASQPPRKRMKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 1794

[Close]

BLAST of mRNA_P-littoralis_Contig146.18.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 9.050e-55
Identity = 96/109 (88.07%), Postives = 98/109 (89.91%), Query Frame = 0

Query:   38 EANQPPRKRVKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 146
            EA+QPPRKR+KRGTFSVDLMPLLLRM           KLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ
Sbjct:  465 EASQPPRKRMKRGTFSVDLMPLLLRM-----------KLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ 562

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig146.18.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig146.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JMD7_9PHAE	2.870e-92	96.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K4R3_9PHAE	1.800e-85	97.26	PHD-type domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KG30_9PHAE	9.050e-55	88.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig146	contig	P-littoralis_Contig146:67624..68061 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig146.18.1	mRNA_P-littoralis_Contig146.18.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig146 67624..68062 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig146.18.1 ID=prot_P-littoralis_Contig146.18.1|Name=mRNA_P-littoralis_Contig146.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=146bp
GLSASAGSGSVVGDKRPSVQPSCDKGDASCKGVESIDEANQPPRKRVKRG
TFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGL
CKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQ