prot_P-littoralis_Contig146.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig146.17.1
Unique Nameprot_P-littoralis_Contig146.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length113
Homology
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BLAST of mRNA_P-littoralis_Contig146.17.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.700e-68
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHA 113
            MCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHA
Sbjct: 1208 MCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHA 1320
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BLAST of mRNA_P-littoralis_Contig146.17.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.220e-62
Identity = 109/140 (77.86%), Postives = 110/140 (78.57%), Query Frame = 0 
Query:    1 MCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAG---------------------------VSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHA 113
            MCLDVLHDGGGATIGKRDDERHLYP+KYEEQIDEVVGVLAKAG                           VSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLV VL PVGKNSRTLV SVIGMVVNHA
Sbjct:   54 MCLDVLHDGGGATIGKRDDERHLYPDKYEEQIDEVVGVLAKAGXXXXXXXXXXXXXXXXXXXXXXXXXARVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVIVLTPVGKNSRTLVNSVIGMVVNHA 193
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BLAST of mRNA_P-littoralis_Contig146.17.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.140e-33
Identity = 70/119 (58.82%), Postives = 80/119 (67.23%), Query Frame = 0 
Query:    1 MCLDVLHDGGGAT------IGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHA 113
            MC++VL D   AT      +GKR DE HLYP+ Y  QID VVG+   +GV   DL  FS  L ILDSLT+ACLRPQD LGCLA + YVK  RL+FVLPP  KNS  L KS IG+VV HA
Sbjct: 1309 MCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSGVDASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVYVKGTRLIFVLPPECKNSEALKKSDIGLVVTHA 1427
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE2.700e-68100.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KG30_9PHAE2.220e-6277.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKZ5_ECTSI2.140e-3358.82PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:66141..66479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.17.1mRNA_P-littoralis_Contig146.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig146 66141..66479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig146.17.1 ID=prot_P-littoralis_Contig146.17.1|Name=mRNA_P-littoralis_Contig146.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
MCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLE
RFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRT
LVKSVIGMVVNHA
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