mRNA_P-littoralis_Contig146.15.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE) HSP 1 Score: 1699 bits (4400), Expect = 0.000e+0 Identity = 999/1499 (66.64%), Postives = 1065/1499 (71.05%), Query Frame = 2
Query: 2 DNPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVALGRGKRKKTTTDKDKSVPAASSVPRDHAHWVGKEAEILANIKNGLEGWDDAYLAKWKKDHQAEREEAERIFGEEQLEQEKXXXXXXXXXXRQAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGDWFCSECVATGRAPVSNQEDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARTILAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRGRSRPGQKGILVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILDKSGGGLLEEARRDGSLFMALGLGRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGERSMSFRRKWICQTTRRSRRSAPSAPRTRPSVDWVHGCFWPGPGCRLVTVFRIASSGGHTVRFTDRSNSPVPSTWVTSNPRPKTRPG-SPRRDDTGRFTRAR-----WKSVRR---------RIRTCVFSTASSMGMTRWRPTRGMRPTLMRTAYLGWETGARWIKAELSISRTGKTSASFWPSWWRRTASSPSWPKSGTPFGGRK*SRCVWTCFTTAGGLPSGSAMTRGTCIPRSTRNRSTRWSAFWRRRGFPPKTW--------------SGSAAPSTSS--------TRSRQLAFGLKIR*GVWRARRT*--RMADWCLSSHRSEKTPGPWSRA*LGWW*TTQRMSGRQVRLR*CS*SGDG**QRTSKKTTKRRVPNNSWRVSNREMQRADSRRR*IQMSSAKTTRVDTLL----PRATLSTEPIKRFNITHPEI*RRLT-RRIG*EIAVVGKRGFYSLPSLVTRQLRSPSTEKTTTTVSCAA-------CISTWGSMLWAYPRSGRISSERFMSRPL*RSVIRWESLNRMTGC*TTLRWLGTGSTR*EKRTTWQKVTT*MMIPVSFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNT*IGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGISTQNIRGDDETKELQKQLGKEELKFKIVKMQVERHEIERKHGLSASAGSGSVVGDKRPSVQPSCDKGDASCKGVESIDEANQPPRKRVKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKKVECVCDSQNM 4345
D PPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVALGRGKRKKTTTDKDKSV AASSVPRDH HWVGKEAEILAN+KNGLEGWDDAYLAKWKKDHQAEREEAERIFGEEQLE XXXXXXXXXXRQAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGDWFCSECVATGRAPVSNQEDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTART+LAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGR RSRPGQKG LVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESIL KSGGGLLEEARRDGSLFMALGL RYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAG + + +P G G RL+ R S GH V + + P RP+ P ++T R ++ R +KS R+ +F + + +L R LG G++ K K F P K G ++ GG G P + + G + S P S ++ +L F L V + RT + ++ + E+T GP++ + +R+ ++ + + R ++ + R+ S + + E D+RR + +S R D + PR + + R R L +G + A K G + QLRS + A I M Y S +R V+ +L R G K K P SFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNT IGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGIST+NIRGDDETKELQKQLGKEELKFKIVKMQVER EIERKHGLSASAGSGSVV DKR SVQPSCDKGDASCKGVESIDEA+QPPRKR+KRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKKVECVCDSQNM
Sbjct: 375 DKPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVALGRGKRKKTTTDKDKSVSAASSVPRDHTHWVGKEAEILANVKNGLEGWDDAYLAKWKKDHQAEREEAERIFGEEQLEXXXXXXXXXXXXXRQAEESDRACWKCGEVDHRSDGDLIILCDGADCSGASHVGCCDPPLQGVPDGDWFCSECVATGRAPVSNQEDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARTMLAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRVRSRPGQKGTLVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEARRDGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISPEDASKC---------GLGTRLLLA-RARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDAYDPVASDKRNEANAHENSLSR---LG--NGSKVDKGRTFSIEDWKDKCKFLADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPP---VGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLV----IGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRL---SKAIDSDEFSEDDARRD-LAAASDSLKRADKEVQHYAPRDSEKADQEDRVRNRRRRQARVLQFAELGDKAAPFTKYG----KNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDR---------VLNHFALARH------------GEYEMRKAYNLAKSDNVNDDPSSFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNTWIGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGISTENIRGDDETKELQKQLGKEELKFKIVKMQVERQEIERKHGLSASAGSGSVVSDKRSSVQPSCDKGDASCKGVESIDEASQPPRKRMKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKKVECVCDSQNM 1822
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE) HSP 1 Score: 685 bits (1767), Expect = 2.250e-228 Identity = 354/394 (89.85%), Postives = 358/394 (90.86%), Query Frame = 1
Query: 2368 KGRTFNIENWKDKCKFLAELVEENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAG---------------------------VSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHATDERTTGPFAVMLVIG*RLMTTHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDDARRHLAAASDSLNRADKEVQHYAPRDLEKADQEDRVRNRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYNLAKSDNVNDDPS 3468
KGRTF+IE+WKDKCKFLA+LVEENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYP+KYEEQIDEVVGVLAKAG VSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLV VL PVGKNSRTLV SVIGMVVNHA DERTTGPFAVMLVIG RLMT HLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDDARR LAAASDSLNRADKEVQHYAPRD EKADQED VRNRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYNLAKSDNVNDDPS
Sbjct: 10 KGRTFSIEDWKDKCKFLADLVEENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPDKYEEQIDEVVGVLAKAGXXXXXXXXXXXXXXXXXXXXXXXXXARVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVIVLTPVGKNSRTLVNSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQENYKAACAEQQLAREQQRDAEGRLSKAIDSDEFSEDDARRDLAAASDSLNRADKEVQHYAPRDSEKADQEDNVRNRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYNLAKSDNVNDDPS 403
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5JMD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD7_9PHAE) HSP 1 Score: 560 bits (1442), Expect = 9.230e-184 Identity = 282/294 (95.92%), Postives = 285/294 (96.94%), Query Frame = 2
Query: 3464 PVSFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNT*IGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGISTQNIRGDDETKELQKQLGKEELKFKIVKMQVERHEIERKHGLSASAGSGSVVGDKRPSVQPSCDKGDASCKGVESIDEANQPPRKRVKRGTFSVDLMPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKKVECVCDSQNM 4345
P SFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNT IGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGIST+NIRGDDETKELQKQLGKEELKFKIVKMQVER EIERKHGLSASAGSGSVVGDKRPS QPSCDK D+SCKGVESID ANQPPRKRVKRGTFSVDL PLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKK ECVCD+Q M
Sbjct: 74 PSSFSRQISGIISAQELNNRSCLSDKDAIRDQQHDALNTWIGDSLFDGNKPEPTDGVVEKLMREILAQNREILMQSRGISTENIRGDDETKELQKQLGKEELKFKIVKMQVERQEIERKHGLSASAGSGSVVGDKRPSAQPSCDKRDSSCKGVESIDAANQPPRKRVKRGTFSVDLTPLLLRMNALFNEKVVEMKLVPGKSYPRRTLENCMYHVSTFGGLCKDQVREYMVAHVGEDDSSRSDVLQFYELFPIRKKEKMVRDIVGRQKQEGRSEWSYWFCKGCKKRECVCDNQKM 367
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5L2T9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T9_9PHAE) HSP 1 Score: 479 bits (1234), Expect = 1.400e-152 Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 2
Query: 1190 VMGQGGRGRSRPGQKGILVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILDKSGGGLLEEARRDGSLFMALGLGRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAG 1918
VMGQGGRGRSRPGQKG LVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESIL KSGGGLLEE RRDGSLFMALGLGRYRATNTTGFVTNG RFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAG
Sbjct: 2 VMGQGGRGRSRPGQKGTLVRDVHRKKTGEVTRFFVDEDTGYNGFEIQWKGCGGTSVYSTRDVLCGAERYGGNQGVTSPKDDDARVLLFLRGVLCMVNVQVQKYVIDDDRKIKRRRDAVTLPKEVCKKTLSLRMDAWKGIQAVSLADTMTEYEESILGKSGGGLLEEGRRDGSLFMALGLGRYRATNTTGFVTNGCRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAG 244
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.420e-131 Identity = 258/528 (48.86%), Postives = 334/528 (63.26%), Query Frame = 1
Query: 1915 GGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDGYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFNIENWKDKCKFLAELVEENGIKPIMAKIG-DAVRRKEVIEMCLDVLHDGGGAT------IGKRDDERHLYPEKYEEQIDEVVGVLAKAGVSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVFVLPPVGKNSRTLVKSVIGMVVNHATDERTTGPFAVMLVIG*RLMTTHLQENYKAACAEQQLAREQQRDAEGRLSKAI-DSDEFSEDDARRHLAAASDSLNRADKEVQHYAPRDLEKADQEDRVRNRRRRQARVLQFAELGDKAAPFTKYGKNYNDGQLRSMYLHVGKYALGLPAFGPNILRTIHVTTVMTVCYTLGIPQSDDRVLNHFALARHGEYEMRKAYNLAKSDNVNDDPSFL 3474
GG EL E++ + + + T+ T + + A +CGLG R LL +ARV G S C+KW H PLYR TRP+ +G I TENT+ SQTR+ K+ V++S+T QD VL I + Y VA+ KR++A+ +EN L R+GNG K D GR WK KFL + VEE+ I P M +IG DA R EV++MC++VL D AT +GKR DE HLYP+ Y QID VVG+ +GV DL FS L ILDSLT+ACLRPQD LGCLA + YVK RL+FVLPP KNS L KS IG+VV HA +RT GP+AVM+VIG RLM HL+ NYK A R Q + A+ L+ A+ +S + AR+ LAAA ++++ YAP + E+ ++EDR + +R Q R + +AELGDK FT YGKNY+ L MY +VG+Y LGLPAFGPNILR+IHVT VM VCY +GI D R++ HFALARHGE+E ++AYN D V DDP+ +
Sbjct: 1115 GGVYTELPSEINCASCDRENTVVTNTCQQARECGLGVRALLVKARV--GSVESGCYKWMKHFPLYRVFVDTRPDRIGKINVGTENTSHASQTRKDAALLKTGVDVSATSSQDRAVLKQIGEKYKEVANVKRSDASDYENGLKRVGNGQKYDNGRLARGAEWKKDLKFLGDSVEESVIAPFMDRIGEDAEGRDEVVKMCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSGVDASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVYVKGTRLIFVLPPECKNSEALKKSDIGLVVTHAKSDRTKGPYAVMMVIGRRLMRKHLEANYKDA-------RSQVQKAQTNLADAVRNSTKDGVVKARKILAAA-------ERQLTEYAPTESERKNEEDRAKAEKRDQ-REIGYAELGDKVCTFTAYGKNYDQSMLNDMYKYVGEYYLGLPAFGPNILRSIHVTDVMEVCYKIGIHYDDMRLVRHFALARHGEFERKRAYNGHTMDMVQDDPNSI 1625
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5K5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y8_9PHAE) HSP 1 Score: 341 bits (875), Expect = 1.150e-101 Identity = 177/191 (92.67%), Postives = 180/191 (94.24%), Query Frame = 2
Query: 650 SECVATGRAPVSNQEDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARTILAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYRLYGIKVMGQGGRGRSR 1222
S C+ G + EDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTAR +LAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDY LYGIKVMGQGGRGRSR
Sbjct: 185 SRCI--GDVVRAWMEDTETLPDFGGVEEGFICDAGDAADVDEEEEEDPTDVVVSGRNQPSSPSVSEDTDGQVRKAVKPRKRSGVAHETSELCEPNPTHKHSSLLWRRGKDAVSNVLKRLSDQFKTARAMLAEIKKARTKQDTRSLTYLHIEKALGDPTGRDFSDVVEKLEKFDYGLYGIKVMGQGGRGRSR 373
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 176 bits (447), Expect = 7.490e-41 Identity = 123/353 (34.84%), Postives = 185/353 (52.41%), Query Frame = 1
Query: 1921 AVDELSEEVDLPNYETKQTICTISPEDASKCGLGTRLLLARARVST----GHGVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDGYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFNIENWKDKCK----FLAELVEENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAG-VSTEDLERFSCALHILDSLTSACLRPQDSLGCLACKAYVKNGRLVF---------VLPPVGKNSRTLVKSVIGMVVNHATDERTTGPFAVMLVIG*RLMTTHLQENYK 2925
+V+EL V + + T P + + LG R +LARARV G G S ++ PLYR ++ +R ++L + PTTE+++ VS T RHR Y A S + DL V + I GY V+ +KR+E EN R+ G+K +KGRT + + D+C L ELV NGI M K+ D + ++++MC +VL KR++E HL P +++++I+ +V L + V+ D+ SC+L +LDSL +A LR QD LG LA Y + V+ +LP KN + L S G+VVNH E+ G +AVM VIG ++M + L+ K
Sbjct: 867 SVNELPPGVQAKTLKEQDTQL-YQPGEPTSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMRYPLYRLLDLSRVDNLP-LCPTTEHSSHVSPTLRHRDAYSQAFSSHSKRKADLDVFDIIKGGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGS--DECLQGFLLLEELVSRNGIDSFMEKLPD---KDDIVKMCNEVLE----MNPRKRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAKDLYRMKCKDVYGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRSFLRRRRK 1208
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5JKP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP3_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.480e-32 Identity = 65/101 (64.36%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 2200 RPFYKSAVEISSTKDQDLRVLNSIFDGYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFNIENWKDKCKFLAELVEENGIKPIMAKIGDAVRRKEVIEM 2502
R FY+S + S T D D VL IFDGY PV +KR+EA AHENSL+RLG GSK + GRTF++E W+DKCKFLA+LVEENGI PIMAKI DA RR++V+ M
Sbjct: 72 RKFYESVTKGSPTSDLDSLVLKEIFDGYTPVGKEKRSEAAAHENSLARLGRGSKQNAGRTFSVEEWEDKCKFLADLVEENGIGPIMAKIEDAARREKVVAM 172
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5K8U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U3_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.310e-28 Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 2
Query: 2 DNPPITRLEADRYFMGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVAL 214
D P ITRLEADRYFMG RHRVPCRKTRRRHGRR GNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEV +
Sbjct: 447 DKPLITRLEADRYFMGDRHRVPCRKTRRRHGRR-GNRGYLKKVSAYHAEPSSGRPGLWSVRGGADPPEVCI 516
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Match: A0A6H5K3D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D8_9PHAE) HSP 1 Score: 125 bits (314), Expect = 3.450e-25 Identity = 78/204 (38.24%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 1915 GGAVDELSEEVDLPNYETKQTICTISPEDASKCGLGT--RLLLARARVSTGHGVSDCFKWWAHCPLYRQIEFTRPE-HLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDGYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFNIENWKDKCKFLAELVEENGIKPIMAKIGDAVRRKEVIEMCLDVL 2517
GG DEL V L + E ++ TI ++AS+ G G R L+ARARVS + +W+A+ PLY + F+RPE I+PTTENT+R+S TR+H + A+E S T+ DL V++ + Y+ VA +K+ + EN R+G G KV GRT N + F+ ++++ENG+KP+M + D E +E+C VL
Sbjct: 805 GGVHDELPPGVRLAHEEQRKITLTILKKEASEAGYGLAMRALVARARVS-----DELCQWYAYAPLYMVMLFSRPEIDKKSIKPTTENTSRLSPTRKHTIAFNEAMEFSRTRIADLEVVDLWYKQYEYVAKEKKRLSVIWENKRVRMGYGPKVKGGRTHKSGN-NESILFMRKMLKENGVKPVMDLMSD-----EDMEVCYRVL 997 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig146.15.1 >prot_P-littoralis_Contig146.15.1 ID=prot_P-littoralis_Contig146.15.1|Name=mRNA_P-littoralis_Contig146.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=817bp MGGRHRVPCRKTRRRHGRRRGNRGYLKKVSAYHAEPSSGRPGLWSVRGGAback to top mRNA from alignment at P-littoralis_Contig146:63314..68346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig146.15.1 ID=mRNA_P-littoralis_Contig146.15.1|Name=mRNA_P-littoralis_Contig146.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5033bp|location=Sequence derived from alignment at P-littoralis_Contig146:63314..68346+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig146:63314..68346+ >mRNA_P-littoralis_Contig146.15.1 ID=mRNA_P-littoralis_Contig146.15.1|Name=mRNA_P-littoralis_Contig146.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2451bp|location=Sequence derived from alignment at P-littoralis_Contig146:63314..68346+ (Pylaiella littoralis U1_48)back to top |