mRNA_P-littoralis_Contig145.112.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: D8LG86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG86_ECTSI) HSP 1 Score: 249 bits (637), Expect = 3.100e-78 Identity = 180/261 (68.97%), Postives = 188/261 (72.03%), Query Frame = 1
Query: 286 MDEPEVTGGGVEDNGEHDDETMMTTPKGMGPKRPSTGSMSARATASHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQELARERENNARTQGKNLSNHERALAQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYQEVRAQKAAENRKRTETVRKQRXXXXXXXXXXXXXXEAKLQEEHRRRIAAEKKKTQEAERMIEKMEQDEDVLIERLKKVQDEQRKAYELLQESLES 1068
M EPEVTG ED GE+DDE M T PKGMGPKRPSTGSMSARATA+ MLEAKNTRKRAEADVHLLANRLAHLQAEEEKAR+KTEETKQRAMEI+RLKQ+NQ+LA ERE+NARTQGKN SNHERALAQRK XXXXXXXX TYQ AENR+RTE VR X XXX RI AE TQEAERMIEKMEQDEDVLIERLKKVQDEQRKAYELL ESLES
Sbjct: 1 MSEPEVTGSVGEDKGEYDDEMMTTPPKGMGPKRPSTGSMSARATANLMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARRKTEETKQRAMEIKRLKQQNQQLALERESNARTQGKNSSNHERALAQRKQKQQHDLQSTKANLEKQRRTNAXXXXXXXXALQMTYQXXXXXXXAENRRRTEMVRXXXXEARLKKEAEQXXXXXXXXXXXXXRIEAEXXXTQEAERMIEKMEQDEDVLIERLKKVQDEQRKAYELLHESLES 261
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A6V1KT72_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KT72_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 9.360e-10 Identity = 90/219 (41.10%), Postives = 118/219 (53.88%), Query Frame = 1
Query: 418 ASHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQELARERENNARTQGKNLSNHERALAQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYQEVRAQKAAENRKRTETVRKQRXXXXXXXXXXXXXXEAK---LQEEHRRRIAAEKKKTQEAERMIEKMEQDEDVLIERLKKVQDEQRKAYELLQESLE 1065
AS ML+AKN+RKRAEADV LL NRL HLQ EEE+A KK ETK RA EI +LK++N + +++ + L+ ++ + + E R Q+ E R XXXXXXXXXXXXXX LQEE+ R+I AE + EAER+IE++EQ E +I RLKK Q++QR AYE L+ SL+
Sbjct: 56 ASAMLDAKNSRKRAEADVKLLQNRLKHLQMEEERAFKKVYETKSRAKEILKLKKRNTDHMMNKQSYNHSMSALLNETQQNITSTRLQQKDRLNMTKQTLQEDRTWQGNQGKAQKEQLNA---EARRQREGEYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEEYARKIKAEADRRTEAERLIEELEQQEARMINRLKKAQEDQRSAYEDLRTSLD 271
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A812UQ84_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UQ84_SYMMI) HSP 1 Score: 61.2 bits (147), Expect = 2.760e-7 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 418 ASHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQEL 594
AS MLE KN+RKRAE D+ LLANR+A L+AEEE+A+ K ETKQRA EI LK++N+++
Sbjct: 12 ASAMLELKNSRKRAEGDMQLLANRVALLKAEEERAKSKVRETKQRAKEILDLKKRNEDM 70
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A024TRB7_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRB7_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.930e-5 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 406 ARATASHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQE 591
A + S MLEAK RKRAE DV LLANRLAHL+ EE+KA+KK +E +RA +I +K++N E
Sbjct: 153 ATSIQSAMLEAKMQRKRAEEDVQLLANRLAHLRTEEKKAQKKIDEANKRAEDIEAIKRRNAE 214
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A662WV05_9STRA (Pterin-binding domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV05_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 5.860e-5 Identity = 33/60 (55.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 421 SHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQELAR 600
S ML+AKN RK+AEAD LLANRLAHL+AE+ +A+K+ EE ++RA EI ++++N++ R
Sbjct: 520 SAMLDAKNQRKQAEADAQLLANRLAHLRAEDARAQKRIEEAQRRAKEIEAVRKRNEDRQR 579
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A6A3X7B1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X7B1_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 6.060e-5 Identity = 31/54 (57.41%), Postives = 44/54 (81.48%), Query Frame = 1
Query: 427 MLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQ 588
ML+AKN R++AE D LLANRLAHL+AE+ +A+K+ EE K+RA EI +K++N+
Sbjct: 122 MLDAKNQRRQAEVDAQLLANRLAHLRAEDARAQKRIEEAKRRAREIESIKKRNE 175
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Match: A0A225VTZ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VTZ1_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 8.030e-5 Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 421 SHMLEAKNTRKRAEADVHLLANRLAHLQAEEEKARKKTEETKQRAMEIRRLKQKNQE 591
S ML+AK RK+AE D LLANRLAHL+AE+ +A+K+ EE K+RA EI +K++N++
Sbjct: 118 SAMLDAKKQRKQAEVDAQLLANRLAHLRAEDARAQKRIEEAKRRAREIEAIKKRNED 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.112.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig145.112.2 >prot_P-littoralis_Contig145.112.2 ID=prot_P-littoralis_Contig145.112.2|Name=mRNA_P-littoralis_Contig145.112.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MDEPEVTGGGVEDNGEHDDETMMTTPKGMGPKRPSTGSMSARATASHMLEback to top mRNA from alignment at P-littoralis_Contig145:371820..376329- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig145.112.2 ID=mRNA_P-littoralis_Contig145.112.2|Name=mRNA_P-littoralis_Contig145.112.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4510bp|location=Sequence derived from alignment at P-littoralis_Contig145:371820..376329- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig145:371820..376329- >mRNA_P-littoralis_Contig145.112.2 ID=mRNA_P-littoralis_Contig145.112.2|Name=mRNA_P-littoralis_Contig145.112.2|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig145:371820..376329- (Pylaiella littoralis U1_48)back to top |