mRNA_P-littoralis_Contig145.94.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: D7FPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ3_ECTSI) HSP 1 Score: 210 bits (535), Expect = 4.070e-59 Identity = 155/332 (46.69%), Postives = 194/332 (58.43%), Query Frame = 3
Query: 282 MSIALQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLELVSSAGARLAAEKGP---RNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALNDEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALR 1268
M+ ALQ+LQN+NA LLEAVEEK+RQ+ + S RGG RAN V ++ G++ V+ R + AG L R A ++ + G +QQ+VLLRNKL E QEE+KK++RALSKE+G ++L LGR LND GGWKGRAQQIVML A VKQL+ +LR+ G+DP + G TR Q G+ +VDSQAQE+I+++E R AIEQLE K EEAEALRG+++AKGARV GLEK N QIR+RAKMLL KSD DDRL+DALR EVQALR
Sbjct: 1 MAAALQKLQNQNAMLLEAVEEKSRQLPE--------------------SASRGGRLGERANGV------------------SKTAGDR-----------VI--------RSTSVGYPAGGCLVFSPDRWKRRTPSTAASTIETYHHKLMRGTCTPAKQQIVLLRNKLHEAQEEVKKTYRALSKEVGGTSLGLGRTLNDTGGWKGRAQQIVMLKATVKQLQTQLRN-GRDPGQSGETRSKQ-GRKDVDSQAQEEIHYMERHRGHAIEQLEAKCNARQEEAEALRGQLVAKGARVAGLEKTNMQIRNRAKMLLAKSDTDDRLVDALRKEVQALR 273
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A7S2ST90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST90_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.950e-29 Identity = 116/353 (32.86%), Postives = 186/353 (52.69%), Query Frame = 3
Query: 261 PSRFTGGMSIALQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARC-LKARQ-EADVLARELEACRRQLELVSSAGARLAAEK---GPRNVEVAQVSLSNAGDDR-------VSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALND---EGGWKGRAQQIVMLHARVKQLEARLRSHG--KDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALR 1268
P G S L N+ L + + ++ QV +LG ++EALEPVPG+D + + +L G A + D RDVK+V LAK++R N LE K + L+A+Q EA RE+E+ +Q+ ++S AR K G + A + G+ + S + R ++VV R ++ + EE KK L KE+G LA G A+ E GW+GRA+ IV+L ++VK+L+ L + +DP+ + + ++VD A ++I +E +RRRA EQL ++ L + ++ A AR LE N + R + ++L+ K+D DD+L+D LR E+Q +R
Sbjct: 2 PQGAGGHFSWDAASLAQENSKLSQELADRRLQVKKLGVMLEALEPVPGVDAERLLDLLEGQDVA----EADPRDVKIVQLAKKSR--NLMLENNKLKSQLRAQQTEAAAKDREIESLNKQMAAMASPAAREVIMKQLIGTHPKDEASEKQRDEGEGKEDRSPSFASAQLRRKDREVVEARQRVAKATEEAKKLKNLLHKELG---LAEGEAIPQKVFEDGWRGRAETIVLLRSKVKKLQGDLEAATGRRDPK------MAAQSHHDVDRMAAQEIADMEGERRRATEQLTMGYQALETAHAQTKSKLEASKARTANLENENTKFRKQMRVLIGKADTDDQLVDELRRELQMVR 339
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A7S1G665_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G665_9STRA) HSP 1 Score: 123 bits (309), Expect = 6.780e-27 Identity = 99/307 (32.25%), Postives = 160/307 (52.12%), Query Frame = 3
Query: 363 QLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLELVSSAGARLAAEKGPRNVEVAQVSLSNAGDDR----VSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALNDEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQ-RGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALR 1268
+L L+ A+EPVPG++P+ + V+ G T D D RDVK++ LAK+ R L +L+ E A+ AR EA+V QL V+ +G E + ++ +R KL TQ++LKK+ AL +E+GS + L + +++ W+GRAQ+IVM+ A+++ L +L G + G + + + G +VD+QA+ D+ +E +R+RAIE L E + + EA A + + A ARV LE + +++ K +L K+ DD+ +DALR EV LR
Sbjct: 1 RLEDLLAAVEPVPGMEPERLLDVMEG----TEVVDHDPRDVKIIDLAKQKRLLTVKLQRESAKA--ARLEAEVA---------QLREVADGKVYPKKLRGKAAAEAKEXXXXXXXXXXRLXXXXXXXXXXXXXLMQMRMKLEATQKDLKKTQTALQREVGSK-VDLAKVIDEGSNWRGRAQKIVMMKAKIRDLTEKLAEAGVEDRGFGASGLSRGSGATSVDAQAKSDLRAMEVERQRAIEDLTEGYADMQREAAAQKRKAEAAKARVRTLEMEHKKVKAHLKTMLGKATTDDQFVDALRQEVAQLR 291
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: T0R3B0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R3B0_SAPDV) HSP 1 Score: 117 bits (293), Expect = 8.240e-24 Identity = 118/381 (30.97%), Postives = 187/381 (49.08%), Query Frame = 3
Query: 129 LKLDMGDFDGSSNNCHIRQSLGPCLRAEDSTVGRRVADGSTNDTPSRFTGGMSIALQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLELVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALN-DEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALR 1268
L L D S ++ H + + P + S N + ++ G I Q L+++NA L+ A++ +Q+ +L L+EALEP+PGLD DAF +L+G + D D R+VK+VH AK+ R EK R A + + R +EA + A RL + P +VA+ S + S K E L+ K ELK++ RAL +E+G ++AL L+ + G +GRAQQIVML A++K+LE P + R +VD +A++D+ + +RR+ E+L E L E E L + A AR+ EK +++ + + +LL+KS DD LID L+ E++ +
Sbjct: 28 LALPEFDDSDSDDDSHALEDVPPAIETS-----------SNNQSDFKWDGISDI--QSLKHQNAELVAAIKSHKQQINELQLLLEALEPIPGLDVDAFKDILQG----SEIVDHDIRNVKIVHQAKKLRQATLAYNKEKTRAAAASTKMAEMERAVEAAQTLQLKAERALQRLQQQPRP---DVAKKVPSPEKEVAASKKLEELKL-------KCEAQAVELKRTQRALQREVGD-DVALSDILDASDSGKRGRAQQIVMLKAKIKKLER------AQPSPVDVPR-------DVDRKAEDDLAASKLERRKQSEKLLEDGNALREGHEKLHKKYEATKARLHVFEKESSKSKVKISVLLEKSKNDDLLIDRLQSELETKK 367
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A485L2G9_9STRA (Aste57867_14490 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2G9_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.910e-23 Identity = 122/398 (30.65%), Postives = 192/398 (48.24%), Query Frame = 3
Query: 252 NDTPSRFTGGMSIA------LQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLAREL-EACRRQLELVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVL-----LRNKLRETQEELKKSHRALSKEIGSSNLALGRAL-NDEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALRER*GKSF------SCFEGRETCEDNVHPLCWESLRDNRLDEGLKLS 1388
N PS T ++ +Q L+ +N+ L+ ++E QV +L L++A+EP+PGLD + V+ GG D D RDVK+VH+AK+ R L L + R A + L L EA L KG R ++ Q+ L A + + KE V + L+ KL ELKK+ RAL KE+G ++AL L + E G +GRAQQIVML A+VK+LE + + + + VD++A++++ L+ +++ ++Q+ + + E L + A+ AR+ LEK + + R +LL+KS DD LIDAL E+ LR + K+ S + T D + ESLR D+ +L+
Sbjct: 52 NQRPSTATDAVAFKWDGVGDIQALKLKNSELVTTIQEYKHQVNELHVLLDAIEPIPGLDVNTLKDVMVGGDLV----DHDIRDVKIVHMAKKLRQLKVALNNQTTRGAGAAHKIAELEMALHEASENVL-------------KGQRQIQKLQL-LGGAPEPKAE-KEGNNPNVVPVKKFDELKQKLEALAIELKKTQRALQKEVGD-DVALADILESSESGKRGRAQQIVMLKAKVKKLEKEVAASAPPSDHLDMR---------VDAKAEQELLALKHDKQKQLDQVTADMESFKDATEKLSRKYDAQKARLQVLEKEAGKNKTRVSVLLEKSKNDDALIDALHREMDDLRTKSTKALRARTADSSMPPKATANDEI-----ESLRALCADQKRQLA 415
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A6G0XPV6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPV6_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.520e-22 Identity = 104/345 (30.14%), Postives = 169/345 (48.99%), Query Frame = 3
Query: 240 DGSTNDTPSRFTGGMSIALQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLELVSSAGARLAAEKGPRN--VEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALNDEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALR 1268
DG+ P F +Q L+ +N+ L+ +++ RQV +L L+E +EP+PGLD ++ VL+G D D RDVK+VH+AK+ R L E+ + A L + L + L +L + P ++++ V D+ LR K ELKK+ RAL +E+G ++ L L+ E G +GRAQQIVML A+VK+LE L+ TR + VD++A+ ++ L+ +++ ++Q+ E + L + A+ ARV LEK + + + +LL+KS DD LIDAL+ E++ L+
Sbjct: 57 DGNQAAPPVDFKWDGVGEIQALKLQNSELVATIKDLKRQVAELEVLLEGVEPIPGLDINSLKDVLQGADIV----DHDIRDVKIVHMAKKLRQTKVTLTKERNKAAGASSRIAELEQALHQAQEDLLRSQRQVHKLQLGEKPSEPKIDLSSVVPVKKFDE---------------LRVKFEAQTIELKKTQRALQREVGE-DVPLAELLDGESGKRGRAQQIVMLKAKVKKLEKELQ-----------TRAVP--DTGVDAKAEMELQSLKVDKQKQLDQVTSDLNAFKEATDKLSRKYDAQKARVQVLEKEATKNKTKITLLLEKSKNDDALIDALQNELEDLQ 368
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A1V9Z171_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z171_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.200e-22 Identity = 106/322 (32.92%), Postives = 172/322 (53.42%), Query Frame = 3
Query: 294 LQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLELVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALN-DEGGWKGRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEV 1256
+Q+L+ +NA L+ +++E Q+ +L L+EA+EPVPGLD D+ VL+G + D D R+VK+VH AK+ R EKAR A + L R +EA R +L+L K R ++ Q+ + + K+ + + L+ KL ELK++ RAL +E+G ++ L L+ +E G +GR+QQI+ML A++K+LE R + + P RG VD +A++D+ + +R+R +E+L E+ + E E L + A AR+ EK A+ + + L KS DD+LID L+ E+
Sbjct: 70 IQQLKRQNADLIASLKEHKAQIAELQLLLEAVEPVPGLDLDSLRDVLQG----SEVVDHDVRNVKIVHQAKKLRQATVAYNKEKARAAAAVAKVTDLERAVEAAR-ELQL-----------KAERALQRLQLQKAESAKPPTPEKDSK---KFDELKVKLEAQALELKRTQRALLREVGD-DVPLSEILDSNESGKRGRSQQIIMLKAKIKKLE-RCAAESEGP----------RG---VDRRAEDDLAAAKLERQRQLEKLVEELQGQKETHEKLARKYDAAKARLQVFEKEAAKNKVKIAAFLDKSQTDDQLIDRLQREL 357
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A3L6UZ84_9STRA (Uncharacterized protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UZ84_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.900e-20 Identity = 116/370 (31.35%), Postives = 181/370 (48.92%), Query Frame = 3
Query: 294 LQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLAREL-EACRRQLE---LVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALNDEGGWK-GRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALRER*GKSFSCFEGRETCEDNVHPLCWESLRDNRLDEGLKLS 1388
+Q LQ +N+ L+ +++ V +L L+EA+EP+PGLD + VL+G D D RDVK+VH AK+ R L EK++ A L R+L +A R L+ LV +L + P++ E A +D LR K +LKK+ RAL +E+G ++ L L+ EGG K GRAQQIVML A+VK+LE KD + TR VD++A+ ++ L+ ++R ++ + L + + L + A+ ARV LEK + + + +LL KS DD LIDAL+ E+ LR + + S ++ E+LR L++ +L+
Sbjct: 51 IQALQLKNSELMATIKDYKHHVTELQLLLEAVEPIPGLDVNTLRDVLQGAEVV----DHDIRDVKIVHQAKKLRQAKIALTKEKSKGAGASGRIAELERQLHDAEERHLKSERLVHKL--QLGEKPEPKHTESANTVPLKKFED---------------LRVKYEAMATDLKKTQRALQREVGD-DVPLAEILDGEGGGKRGRAQQIVMLKAKVKKLE-------KDMQ----TRTAP--DTGVDAKAEVELLALKADKQRQLDHVVADLDALKDANDKLSRKYDAQKARVHTLEKDAGKHKTKLAILLDKSHNDDSLIDALQHEMDDLRRQISTNASALAKADSGNIIDATNTVEALRTKCLEQKRQLA 385
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: W2QFS7_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2QFS7_PHYPN) HSP 1 Score: 106 bits (265), Expect = 3.250e-20 Identity = 111/368 (30.16%), Postives = 171/368 (46.47%), Query Frame = 3
Query: 294 LQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLARELEACRRQLE--------LVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSS---NLALGRALNDEGGW--KGRAQQIVMLHARVKQLEARLRSH-----GKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQ--------ALRER*GKSFSCFEGRETCE 1319
+QEL N + TL + + +QV L +EA PVPGLD DA +L D D RDVK+VH AK R+L +L+ EK + A +++ L +A +QLE + AR+AAEK N V Q L + + L++ V L++K Q+ELKK+ RAL +E+G +G N G +GRAQQI+ML +VK+L+ RL + DP +G V+ +VD +AQ+D++ + R++ ++QL + + + RD+ ++L+ KS DD L+DAL+ +++ A R R S C E E
Sbjct: 101 IQELTNADTTLTSEIRDLRQQVKALQIQLEAQAPVPGLDVDAVQDILLEKDNL----DHDVRDVKIVHQAKTLRSLKRQLQREKQLAMDATKQSQAL----QAANKQLEEEVDTLKLKLQRFQARVAAEKANNNGAVNQPQLPESPSSDTNSDGGSLKKLVDELKSKNTALQQELKKTQRALVREVGEDVPLEEIVGNTDNAASGASRRGRAQQIIMLKTKVKKLQTRLATMRPGTTSPDPHDLGN--VL-----DVDQRAQQDLSGQQMHRQKLLDQLTTQRDXXXXXXXXXXXXXXXXXXXXXXXXREKHETRDKFQVLVDKSRTDDALVDALQRQLETWKTKLHDARRARTADSSKCTSQDERVE 453
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Match: A0A397DBV2_9STRA (GGACT domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DBV2_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.120e-20 Identity = 116/370 (31.35%), Postives = 181/370 (48.92%), Query Frame = 3
Query: 294 LQELQNRNATLLEAVEEKNRQVLQLGTLVEALEPVPGLDPDAFISVLRGGSGATRANDVDYRDVKVVHLAKRARALNARLEGEKARCLKARQEADVLAREL-EACRRQLE---LVSSAGARLAAEKGPRNVEVAQVSLSNAGDDRVSGKEERLRQQVVLLRNKLRETQEELKKSHRALSKEIGSSNLALGRALNDEGGWK-GRAQQIVMLHARVKQLEARLRSHGKDPERIGGTRVIQRGQNNVDSQAQEDINFLECQRRRAIEQLEEKHKVLHEEAEALRGRVMAKGARVTGLEKANAQIRDRAKMLLKKSDADDRLIDALRCEVQALRER*GKSFSCFEGRETCEDNVHPLCWESLRDNRLDEGLKLS 1388
+Q LQ +N+ L+ +++ V +L L+EA+EP+PGLD + VL+G D D RDVK+VH AK+ R L EK++ A L R+L +A R L+ LV +L + P++ E A +D LR K +LKK+ RAL +E+G ++ L L+ EGG K GRAQQIVML A+VK+LE KD + TR VD++A+ ++ L+ ++R ++ + L + + L + A+ ARV LEK + + + +LL KS DD LIDAL+ E+ LR + + S ++ E+LR L++ +L+
Sbjct: 80 IQALQLKNSELMATIKDYKHHVTELQLLLEAVEPIPGLDVNTLRDVLQGAEVV----DHDIRDVKIVHQAKKLRQAKIALTKEKSKGAGASGRIAELERQLHDAEERHLKSERLVHKL--QLGEKPEPKHTESANTVPLKKFED---------------LRVKYEAMATDLKKTQRALQREVGD-DVPLAEILDGEGGGKRGRAQQIVMLKAKVKKLE-------KDMQ----TRTAP--DTGVDAKAEVELLALKADKQRQLDHVVADLDALKDANDKLSRKYDAQKARVHTLEKDAGKHKTKLAILLDKSHNDDSLIDALQHEMDDLRRQISTNASALAKADSGNIIDATNTVEALRTKCLEQKRQLA 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.94.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig145.94.1 >prot_P-littoralis_Contig145.94.1 ID=prot_P-littoralis_Contig145.94.1|Name=mRNA_P-littoralis_Contig145.94.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp MDIAPAQQQFASDASTTYDPAGLALKYGVDGDGELKLDMGDFDGSSNNCHback to top mRNA from alignment at P-littoralis_Contig145:289192..300911+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig145.94.1 ID=mRNA_P-littoralis_Contig145.94.1|Name=mRNA_P-littoralis_Contig145.94.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11720bp|location=Sequence derived from alignment at P-littoralis_Contig145:289192..300911+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig145:289192..300911+ >mRNA_P-littoralis_Contig145.94.1 ID=mRNA_P-littoralis_Contig145.94.1|Name=mRNA_P-littoralis_Contig145.94.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1251bp|location=Sequence derived from alignment at P-littoralis_Contig145:289192..300911+ (Pylaiella littoralis U1_48)back to top |