mRNA_P-littoralis_Contig145.59.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig145.59.1
Unique NamemRNA_P-littoralis_Contig145.59.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE)

HSP 1 Score: 566 bits (1458), Expect = 4.250e-198
Identity = 270/300 (90.00%), Postives = 291/300 (97.00%), Query Frame = 3 
Query:  504 GGGQHFPHSDQDSLGLFGGDGRRRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHWYELTAESRAHINFKQQRQFGSLWKLLSELPDEPGVVPQEFMDKSSEDANKKN 1403
            G GQHFPHSDQ+SLGLF GDG+RRV+KPERIIIVRHGESLGN DESTYVHVPDWKIPLTKKGFG+GQ+AGEKIKE+IGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIV SKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANE+IARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEE+ NPENGSFVVMER+EK+DTD RFF++V+A++RDLRHWYELT ESRAHINFK+Q+QFGSLWKLLSELPDEPGV+P+EFM+K+SED NK N
Sbjct:   13 GSGQHFPHSDQESLGLFSGDGKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAERRDLRHWYELTPESRAHINFKEQQQFGSLWKLLSELPDEPGVLPEEFMNKTSEDPNKNN 312
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI)

HSP 1 Score: 473 bits (1218), Expect = 2.620e-161
Identity = 227/248 (91.53%), Postives = 242/248 (97.58%), Query Frame = 3 
Query:  504 GGGQHFPHSDQDSLGLFGGDGRRRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHW 1247
            G GQHFPHSDQ+SLGLF GDG+RRV+KPERIIIVRHGESLGN DESTYVHVPDWKIPLTKKGFG+GQ+AGEKIKE+IGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIV SKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANE+IARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEE+ NPENGSFVVMER+EK+DTD RFF++V+A++RDLRHW
Sbjct:   91 GSGQHFPHSDQESLGLFSGDGKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAERRDLRHW 338
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 3.210e-135
Identity = 208/283 (73.50%), Postives = 230/283 (81.27%), Query Frame = 3 
Query:  543 LGLFGGD-GRRRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEK-----------IKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVN---ADQRDLRHWYELTAESRAHINFKQQRQFGSLWKLLSELPDEP 1346
            LG++  D G R+++KPERIIIVRHGES+GNLDESTYVHVPDWKIPLTK+G+ D + AG+K           IKEH+GDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATI  SK ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDF+NE IARDDLNV+IVTHGLTLRL+VMRWFQYSIADFE ++NP NG  VVMERR  +    +   E +     +     WYELT ES   IN K QRQFGSLW+LLSELP EP
Sbjct:   66 LGIYSADHGHRKLVKPERIIIVRHGESMGNLDESTYVHVPDWKIPLTKQGYRDARLAGQKXXXXXXXXXXKIKEHVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFSNEQIARDDLNVVIVTHGLTLRLMVMRWFQYSIADFENTYNPPNGGHVVMERRGGECARLQRTSEAHRGKGPKGGSEAWYELTPESLDLINLKPQRQFGSLWRLLSELPQEP 348
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA)

HSP 1 Score: 322 bits (826), Expect = 5.570e-101
Identity = 164/296 (55.41%), Postives = 201/296 (67.91%), Query Frame = 3 
Query:  537 DSLGLFGGDGRRRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAG----------------------------MVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHWYELTAESRAHINFKQQRQFGSLWKLLSELPD 1340
            D  G   G G   +++P RII+VRHGES GN+D   YV+ PDWKIPLTKKG+ D + AG++IKE +GD P++IYTSPYLRTKQTLAG                            MV A+DTN IVGVREEPRLTEQQFGNFQN+  +  S+ +R RFGRFY+RFP+GESGLDVYNR TSFIAT+FRDF+N++IAR+DL+VIIVTHGLTLRL +MR+F Y+I DFE S+NP NG+FVVM+R+E  +                  WYEL  E R  +N   Q   GSLWK+L E+ D
Sbjct:   69 DGGGYSNGSG---IVRPARIILVRHGESAGNVDPQAYVNTPDWKIPLTKKGWKDARLAGQQIKEIVGDSPIYIYTSPYLRTKQTLAGKGSPQPRSLPLSLAPLPLSSTRPPAPPGMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFRFPEGESGLDVYNRVTSFIATLFRDFSNKDIAREDLDVIIVTHGLTLRLFLMRFFHYTIHDFENSYNPNNGAFVVMQRQEGPEGQS---------------WYELMPEGREALNLPPQNGVGSLWKILQEMND 346
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA)

HSP 1 Score: 295 bits (754), Expect = 3.220e-92
Identity = 147/267 (55.06%), Postives = 185/267 (69.29%), Query Frame = 3 
Query:  567 RRRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARD-----DLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDL-RHWYELTAESRAHINFKQQRQFGSLWKLLSELPDEPG 1349
            RR +++P+RI +VRHGESLGN+    Y++VPDW+I LT++G    +  G KI   IG+ P+F YTSPY RTK+TL  MV  F+ + IVGVREEPRLTEQQFGNFQNL  I + K ER+ +GRFYYRFPQGESG DVY R ++F+  ++RD AN  +  +     DLNV+IV+HGLTLRLL+MRWFQY+I+DFE+S NP N +FVVMERRE              DQ    R WYELT ES   +N+      GSLWKL+SEL  + G
Sbjct:   35 RRSLVRPKRIFVVRHGESLGNISPEVYINVPDWRISLTEEGKEQAKATGSKISHIIGEDPVFFYTSPYRRTKETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYRFPQGESGFDVYTRVSTFLPDLYRDAANAELFGEGQTARDLNVVIVSHGLTLRLLLMRWFQYTISDFEQSHNPPNAAFVVMERRE--------------DQAHTGREWYELTEESLKLLNYSPPEHKGSLWKLMSELSHDHG 287
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA)

HSP 1 Score: 276 bits (706), Expect = 8.310e-83
Identity = 126/204 (61.76%), Postives = 160/204 (78.43%), Query Frame = 3 
Query:  570 RRVIKPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERRE 1181
            +++ KP RII+VRHGES GN+DE  YV  PDWK+PL+  G    ++ G ++K  +GD+PL+IYTSPY RTKQTL+ ++E+F+ N  VGVREEPR+TEQQFGNFQ    +  +K ER  FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+ +I R DLN++IVTHGLTLRLL+MRWF+ ++  FE + NP NGSFVVM R+E
Sbjct:  170 QQITKPHRIILVRHGESTGNVDERVYVETPDWKVPLSPIGHEQARQTGRQLKALVGDEPLYIYTSPYRRTKQTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVDTFESTTNPPNGSFVVMTRKE 373
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S3XT41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT41_HETAK)

HSP 1 Score: 251 bits (642), Expect = 1.330e-76
Identity = 128/200 (64.00%), Postives = 147/200 (73.50%), Query Frame = 3 
Query:  738 DKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHWYELTAESRAHINFKQQRQFGSLWKLLSELP 1337
            D PL  Y SPY RTKQTLAGM+ A +TN I+G REEPRLTEQQFGNFQN+ T   SK ERARFGRFYYRFPQGESGLDVYNR+TSFIATM RD AN  +AR  L+ +IVTHGLTLRL +MRWFQYS+ DFEES NP NG  V+ME+     +DP+   E          WYELT +S   + FK+Q ++GSLWKLL  LP
Sbjct:    1 DAPLLFYCSPYRRTKQTLAGMMGALETNDIIGAREEPRLTEQQFGNFQNVLTTRQSKDERARFGRFYYRFPQGESGLDVYNRSTSFIATMHRDMANPALARPGLHSVIVTHGLTLRLFLMRWFQYSVEDFEESHNPPNGGVVIMEKV----SDPQGRHE----------WYELTDDSLELLKFKRQHRYGSLWKLLDGLP 186
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.780e-76
Identity = 120/201 (59.70%), Postives = 151/201 (75.12%), Query Frame = 3 
Query:  585 PERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDK-PLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANENIAR---DDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMER 1175
            P+RII+VRHGESLGN+DE  Y  +PDWKIPLT+KG       G+KIKE IG+  P+ +Y SPY+RTKQT A M++    N ++ VREEPRLTEQQFGNFQ    ++  K ER +FGRFYYRFP GESGLDVY+R +SFI T+FR++A E   R   +D N+IIVTHGLTLRL +MRWFQ+S+++FE + NP NG  +VM R
Sbjct:   45 PKRIILVRHGESLGNVDELAYCSMPDWKIPLTEKGKEQASNVGKKIKEIIGNNSPISVYLSPYIRTKQTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYRFPDGESGLDVYSRVSSFIGTLFREWAKEQSTRSNHEDNNIIIVTHGLTLRLFLMRWFQFSVSEFENTRNPNNGDIIVMNR 245
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S2IFC4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IFC4_9STRA)

HSP 1 Score: 243 bits (619), Expect = 8.350e-72
Identity = 118/243 (48.56%), Postives = 158/243 (65.02%), Query Frame = 3 
Query:  582 KPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTN--YIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFAN---ENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHWYELTAESRAHINFKQQ 1295
            KP+RII+ RHGESLGN+D+S Y H  DW+IPL++KG    + AG+++ + I ++  FIY SPY RT +T+  M+          +G R EPR+ EQQFGNFQN   +  S+ ER +FGRF+YRFP GE+GLDVYNR T FI+T+FRD  N   E +A + LNV++VTHGLTLRL +MRW Q S+ +FEE +NP+N    VMER+                +   + WYELT ES  H+  KQ+
Sbjct:   72 KPKRIILCRHGESLGNVDDSVYTHTADWRIPLSEKGRNQARDAGKRLAKLIQNEKCFIYHSPYARTTETMKEMMSQLKQRPRQCIGTRSEPRMVEQQFGNFQNYEEVQESRDERVKFGRFFYRFPSGEAGLDVYNRVTIFISTLFRDTHNMRKEGVAMEKLNVVVVTHGLTLRLFLMRWLQISVDEFEEMYNPDNAFLAVMERQ--------------TSECGTKQWYELTEESAKHLRIKQR 300
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BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Match: A0A7S4UG03_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UG03_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.990e-71
Identity = 115/241 (47.72%), Postives = 163/241 (67.63%), Query Frame = 3 
Query:  582 KPERIIIVRHGESLGNLDESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRD--FAN-ENIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQRDLRHWYELTAESRAHINFKQQ 1295
            +P+RII+VRHG+SLGN+DE+TY H  DW+IPL+  G    + AG ++   I ++  F+Y SPY RT +T+  + +  D+ Y +GVR EPR+ EQQFGNFQ    +  S+ ER +FGRF++RFP GE+G+DV+NR TSFI+T+FRD  + N E I+ D+LN+++VTHGLTLRL +MRW Q S+ +FEE +NP+NG   VMER+                +   + WY+LT ES  H+  KQ+
Sbjct:   76 RPKRIILVRHGQSLGNVDETTYTHTADWRIPLSDLGRIQARDAGRRLHALIQNEKYFVYHSPYARTTETMEIIKKELDSEYCIGVRSEPRIVEQQFGNFQIYDDVQESRDERRKFGRFFFRFPNGEAGMDVFNRVTSFISTIFRDTHYMNVEGISMDELNIVVVTHGLTLRLFLMRWLQISVDEFEEMYNPDNGFLAVMERQ--------------TSKCGSKQWYKLTQESADHLRIKQR 302
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRP2_9PHAE4.250e-19890.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ54_ECTSI2.620e-16191.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CA23_9STRA3.210e-13573.50NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S1XZK9_9STRA5.570e-10155.41Hypothetical protein n=4 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SR22_9STRA3.220e-9255.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D0Z6_9STRA8.310e-8361.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3XT41_HETAK1.330e-7664.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0SR39_9STRA1.780e-7659.70Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2IFC4_9STRA8.350e-7248.56Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4UG03_9STRA4.990e-7147.72Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig145contigP-littoralis_Contig145:155808..161011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZ54
PFAMsHis_Phos_1
Model size1819
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009987,GO:0010876,GO:0015850,GO:0015918,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0032365,GO:0032366,GO:0033036,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0071702
Exons8
Evalue2.5e-164
EggNOG OGs2CMFW@1|root,2QQ8J@2759|Eukaryota
Ec32 ortholog descriptionHistidine phosphatase superfamily
Ec32 orthologEc-02_006330.1
DescriptionHistidine phosphatase superfamily (branch 1)
Cds size1374
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig145.59.1prot_P-littoralis_Contig145.59.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig145 156221..160979 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789682.0440395-UTR-P-littoralis_Contig145:155807..1562201680789682.0440395-UTR-P-littoralis_Contig145:155807..156220Pylaiella littoralis U1_48UTRP-littoralis_Contig145 155808..156220 -
1680789682.150486-UTR-P-littoralis_Contig145:160979..1610111680789682.150486-UTR-P-littoralis_Contig145:160979..161011Pylaiella littoralis U1_48UTRP-littoralis_Contig145 160980..161011 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789682.057091-CDS-P-littoralis_Contig145:156220..1563801680789682.057091-CDS-P-littoralis_Contig145:156220..156380Pylaiella littoralis U1_48CDSP-littoralis_Contig145 156221..156380 -
1680789682.0724456-CDS-P-littoralis_Contig145:156843..1568961680789682.0724456-CDS-P-littoralis_Contig145:156843..156896Pylaiella littoralis U1_48CDSP-littoralis_Contig145 156844..156896 -
1680789682.0826497-CDS-P-littoralis_Contig145:157329..1574341680789682.0826497-CDS-P-littoralis_Contig145:157329..157434Pylaiella littoralis U1_48CDSP-littoralis_Contig145 157330..157434 -
1680789682.097628-CDS-P-littoralis_Contig145:157836..1579811680789682.097628-CDS-P-littoralis_Contig145:157836..157981Pylaiella littoralis U1_48CDSP-littoralis_Contig145 157837..157981 -
1680789682.1078432-CDS-P-littoralis_Contig145:158164..1583221680789682.1078432-CDS-P-littoralis_Contig145:158164..158322Pylaiella littoralis U1_48CDSP-littoralis_Contig145 158165..158322 -
1680789682.1188958-CDS-P-littoralis_Contig145:158880..1590241680789682.1188958-CDS-P-littoralis_Contig145:158880..159024Pylaiella littoralis U1_48CDSP-littoralis_Contig145 158881..159024 -
1680789682.130422-CDS-P-littoralis_Contig145:159871..1599761680789682.130422-CDS-P-littoralis_Contig145:159871..159976Pylaiella littoralis U1_48CDSP-littoralis_Contig145 159872..159976 -
1680789682.1420412-CDS-P-littoralis_Contig145:160475..1609791680789682.1420412-CDS-P-littoralis_Contig145:160475..160979Pylaiella littoralis U1_48CDSP-littoralis_Contig145 160476..160979 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig145.59.1

>prot_P-littoralis_Contig145.59.1 ID=prot_P-littoralis_Contig145.59.1|Name=mRNA_P-littoralis_Contig145.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=458bp
MFDPKLTVGLGLGKRVSSRLRCTTIAANKWPTRQSHTRGLTRTAAVRGVS
CETVHSARLLLYPRHTLATAAEASSSCGRANVARKQGGDQGRAKASSAYF
STLRSSSKCVPVRGGAVLSTAASHHPPRTNTHQQQQRQQRRRRQQEQQRL
LSSRDGFGGGQHFPHSDQDSLGLFGGDGRRRVIKPERIIIVRHGESLGNL
DESTYVHVPDWKIPLTKKGFGDGQRAGEKIKEHIGDKPLFIYTSPYLRTK
QTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVMSKAERARFGR
FYYRFPQGESGLDVYNRATSFIATMFRDFANENIARDDLNVIIVTHGLTL
RLLVMRWFQYSIADFEESFNPENGSFVVMERREKDDTDPRFFREVNADQR
DLRHWYELTAESRAHINFKQQRQFGSLWKLLSELPDEPGVVPQEFMDKSS
EDANKKN*
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mRNA from alignment at P-littoralis_Contig145:155808..161011-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig145.59.1 ID=mRNA_P-littoralis_Contig145.59.1|Name=mRNA_P-littoralis_Contig145.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5204bp|location=Sequence derived from alignment at P-littoralis_Contig145:155808..161011- (Pylaiella littoralis U1_48)
CTCTGAGATAGTGCAGAGAGTCGCGAAGACTAATGTTCGATCCGAAACTT
ACAGTGGGGCTGGGTCTCGGGAAGAGGGTGAGCTCACGATTGCGATGTAC
AACCATCGCTGCGAATAAATGGCCAACCCGACAGTCTCATACTCGAGGTC
TTACCCGGACTGCAGCAGTACGCGGGGTAAGCTGTGAAACCGTGCATTCA
GCAAGACTGCTGTTGTACCCAAGACATACCCTCGCTACAGCAGCAGAAGC
ATCCTCCTCCTGCGGTAGGGCCAACGTCGCACGAAAACAGGGTGGAGATC
AGGGCCGAGCGAAGGCGAGCTCTGCATATTTTTCTACTCTCCGAAGTTCC
TCCAAATGTGTCCCGGTTCGAGGTGGTGCAGTCCTCAGCACGGCTGCTTC
ACATCATCCCCCAAGGACGAATACCCATCAGCAGCAGCAGCGGCAGCAGC
GGCGGCGGCGGCAGCAGGAGCAGCAGCGATTGCTCAGCAGCCGGGATGGG
TTCGGTGGGGGGCAGCACTTCCCTCACAGTGATCAGGTGCTCACACAGCA
AGTAACTGGCGTACATGATTGCGAAGTCAATATGCTGGTTTCAAGTACAA
AAGAAAAAGAGGGCCCTCGCCTCGCAGGCTCGCTCTTATTTGAAACGGAG
TTCTTGTTTGTACGGAGTAGTATGTACATATCATGTGATATTATACTCTA
CAACAGCAGCTGAGTATGTGTCGTATACCCATCATTCGATCATGGGATCG
CCGCGCTGCTACTGCTCTCTACCTAACTCACTGCAGCAGCTGCTATGCTG
GCGTAGTCTACATGCACAGCGTGCAGACAAAGTTTCGCCATGCTCCGATC
CAACAGGTTGGGCGAAGTTTGAGCCCAACACGGGTACGGGGAACGATGAC
GTGCACTCGCTGGTGACCAGCAATGTATCTTCGCTTCCCTATTTATCCAT
CAAAGTTCTGACATCGAATCCGCTGCGACTACAACTGCTTGCTGCTGCTG
CTGCTGCTGCTGCTGTATCTCTTATTTTTCTACAGGACAGCCTTGGTCTT
TTTGGCGGCGACGGCAGGCGACGTGTGATCAAGCCGGAACGAATCATCAT
CGTGCGCCACGGGGAGAGTCTAGGGAATCTAGACGAGTCGGTAAGTGCAA
CAAATGGCCGACACTTTGTACAAAACTCATACTATACTCGTATGATTACT
TGTACTTGTACATGAACGGGGAAAGTCCGAGCAGGACACGAAACACAGCT
TGATTTCTCCACCTAGTCACCTGTGCCACCCGCGTGCGCCACACGCACCC
TGTTTTGTTTACATGTGACGCATACAAAAAGACAGTGAACGATGCGGCCG
CATCGCGAGCCTTTCGGTACAGGAGCTCATGAAGGTGATTCTAGAAGTTG
ATTCCACACAGAGAAAAAATTTCTTTTTCGTCAAATGACTCACGGTTGTA
TATCCTCTGTATGTAGAGTATTTTTCTACCATACATGTGCTCTCTTCGGC
TCTTCGGACGGCCCCCCCAACACCAACAGCAGTCGTTTTATTTTCACGCC
TCGTCCAGACTTTCATTTCCATACGAATGTCCCTTGGCATGTCGTCACCG
CTACTCCAGACCTTCGTTCACGTCCCCCGACATTTTTGCCGTCGTCCCAG
ACTTGCGTTGGCGCTCTCGGCACTCCTGTTCTCATTCCAGGTTCAATGAA
GCAACCGCCCCCCGTCATTCCAGACGTGCGATCAAGTCCCTTAGCTTCGA
CGCTCCCAAACCCTCCTTTGGTTGCCGCACACGCCCTCGACCCTACAAGC
CCGTCATTGTGGACTTCCACTGACGTCCAGTTCTGCTCATCACGCAGTCC
AAACAGACATTTCACAAATGTTCCTGAACACGTTCTGCACGCTGCCGTTA
CCTGAGGGCTCGGTCCTAAACCGCTCAGTGTCTCTACGCCTACAGCCGAC
CCCAAACATTGATGTCGTTATCGTTGTCTCCCTCCAGACTTACGTCCACG
TCCCGGATTGGAAGATTCCGTTGACGAAAAAAGGCTTCGGGGATGGCCAG
AGAGCGGGAGAGAAGATCAAGGAACACATCGGGGACAAGCCGCTCTTCAT
CTACACGTCTCCTTACCTGAGAACGAAGCAGGTGTGATGTGACCCGACGA
CGAGGTGTGCGGACGGTGATTGTTGCATTGTTACATTGTTTCCTGTTCGC
GGGCTCTCCAGGTGCTGTTTGTTCCGCGCTGTGTCGGGTTACCCGTTCGG
TCGACCACCCTTTCGCATGTGTCGGTTTCAACTGATGCCGTGAAACGTCA
AGAGGTTGGCTCTTGGTCCTCAACAGGGAGGGGTTCGGAGAGCTGTTAGA
ACTACCGTAGAACGAACAGCCATCGAGTCCCCGACACCCCCCGCCCCCCC
CTGCTCCCAGTTGCAAGCACAGCAAGTGGCCATCGTGAACGGCAATGTTA
CATAATGACGAAACATACCGTGGGTCGGCTGCCGGCTGCCGTGCTTCTAG
CACACACTTTAAGGGGGCGGGCGCGGGTTTGTTGGAACCGCCATGCGTAT
CCCGGGCTCCCTTCCCTGCCCCACACCGCGACCAGCCAAATGGCTATTTC
GTGCACCACGTAATGCGTCTTTGGTTTAGGAGTACAAGTCCGGTAAGACT
CGACGTATGTGTGAATTACCTCAAAAAACCGATAAACAGACCTTGGCCGG
GATGGTGGAGGCGTTCGACACCAACTACATCGTGGGAGTTCGGGAGGAGC
CGCGATTGACGGAGCAGCAGTTCGGAAACTTCCAGAACTTGGCCACTATT
GTCATGTCCAAGGCAGAGCGGGCGCGTTTTGGGCGATTCTACTACAGGTC
CGCACTGTTGTATTGCCAAGTTTGCACCTTTTCCACATGCGTGCATACAT
TGGTGGCACGTACCGCTCTAACGAAGCAGTAAGCACTTCTGCCCTCATCG
TAACACAGCTTCCTCAACGAGGTGTATGCCCAATGTACCATGACCCCCAA
CCAATAGACCAACCCCCCCTGATAAAACAGATTCCCGCAGGGCGAGTCTG
GACTGGACGTGTATAACCGGGCAACGTCCTTCATCGCGACCATGTTCAGA
GACTTTGCCAACGAGAACATCGCCAGGGATGACCTCAACGTTATCATCGT
CACGCATGGACTCACGCTGCGCTTGGTAAGTGAAAGTCCTCATGTCACAC
ATAAGCACACTGGGGGTGGATCGGATTAAGCGCGAGAACAGTCATCGCCT
CGTGTCGTAGCCATGCGATAGCGAGGGGTGATGAAACGAAATGTTGAGTG
GGGGCCGTTCGACAGGTACATGTGATGTCGTGTCATGCTCCGCGCTTCCT
TACATCACCGCCGCCGCCATAAATAGTACCAGGTAGATTGGATCGATGTG
GAGGATTTTTTTGTTTCTAATGAAGACGCCCAGGCTCTTGTGGGACTCAT
GCATTGTTTCCCGACATGGTTCGCGCGATGGGTGCGATGTGAACGTTTGC
AATGCATGGTAAGAGACTCATTAACGACCAAGCTGCTTGTCGTGCTTGCG
GACGTGGTTTATCTCCTTTTCCTGCAGCTGGTGATGCGGTGGTTCCAGTA
TTCGATTGCCGACTTCGAGGAATCGTTCAACCCGGAGAACGGGAGCTTTG
TCGTCATGGAGCGGAGAGAAAAGGATGACACGGTACGCATGTAAAGTAGG
GCGTGATCTGTCGCATATGATATGCATCGTTAGCAATCCGTCCCAACTCT
TATACAAGCTCAGCGTGTGTCAGCCGATCTGAGGCCCAGCCCATCTTCCC
CTGTTCGCACCCTCTTCATTCGCGGGACTTGCCTTTCTGCTTCAAGCGGG
TCCCACAATAACCCGCTTTCTGCTGTTGGTCCCAACAAGCGTGTCCCAGG
AAGTGCGCCATATTTTTTCATTCCACGGCTCATGACACCGCGTCGGGTGT
TCGATATTTTGTGTCCGTTCGCACGATAACCCTAGAGTGAAACAAAAATA
AAGATTGGTAAAGGTGATGTCCGAAAGTTGCAAGTGTATGCAGGCTCTTG
CGACTTTTTGCCGTTCAAATACCTTTTTTGTGTTTTCCTTTTTTTTTTAT
TGTGACGTTTTGCAGGATCCTCGCTTCTTTCGAGAGGTAAACGCGGACCA
GCGGGATCTCAGGCACTGGTGAGTACCTGGCATGTCAGCAGAACCGATCC
ATGAAGCTCATACGAGAAGCTGGAAGCACTTGCAGCGAACGGCCTGCGCA
CATTGTAATTGTGCTCTGTAGTCTCCTCGTCCGATAAGCCAAGGCAAATA
TGTTTATACCTCGAAGTATACTCGATTTGGCCGGCCTTCGAAACGGGTGG
GACCAACGGTTTGCACGACTGTTTGCTGGATACTGTATCAGCAGAGCTCG
ATGTAGTTGCGTCTTGAAAGAAAGCGTGGAATAGCGCTACACCTGCTTTA
CCCTGCCTTGCCTGTCAATGAAATGCATTGGTGACGTTCAGCATCTGCGA
TGAACATCCATGCGCTGGCAAGACTGCTTGGTGTTTTGTTTGTTTGGGTG
TGGCCACTTAAGTAGGTTTTGTCCAACCTCGCACGCGTCTCCGATTGAGT
GCCAATGCTTGTCGGCAATGAACATTTTCAGGTACGAGCTGACAGCCGAG
AGCCGGGCGCACATCAACTTCAAGCAACAGCGGCAATTCGGCTCGCTTTG
GAAGCTCCTTTCCGAGCTACCGGACGAGCCAGGGGTGGTCCCGCAGGAGT
TCATGGACAAAAGTTCTGAGGACGCCAACAAGAAGAACTGACACTGGCAA
ACGTTTTGTTGGTTTTGCCGGCCGGAGTTCCGAGGAACGAGAACGAAAGA
ATACGACGCGGGTTGTAGCCGTTGGAAAGTAGCGGTGCACTCCAACTGAA
AAGCTAATAATTTGGTGGGTTCAAGTGGTGCCTGTAAACGATCGATAGAA
TGTCTTGTTGTAATCTGTTTCATATCGTACCCTTCCAAGTGAAGCGCGGA
GTGCAAAGTGTTCATCATATGTGTGGGCCCTAAGAGGTTTTCGTAAGGGC
AGCGCGCCGTGACGCACCAGTACTTTGCAAGCACGATGGCGTTTGACGAT
GCTAATCTTGCTTGCCTCGCAATATCAAGCGCTCATAGAAGCTGTACTGT
ATAGTTCAAGAGTGAGCTCGTCTGCTCAGATGTCAAATAGCTACCCCAAT
CGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig145:155808..161011-

>mRNA_P-littoralis_Contig145.59.1 ID=mRNA_P-littoralis_Contig145.59.1|Name=mRNA_P-littoralis_Contig145.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1374bp|location=Sequence derived from alignment at P-littoralis_Contig145:155808..161011- (Pylaiella littoralis U1_48)
ATGTTCGATCCGAAACTTACAGTGGGGCTGGGTCTCGGGAAGAGGGTGAG
CTCACGATTGCGATGTACAACCATCGCTGCGAATAAATGGCCAACCCGAC
AGTCTCATACTCGAGGTCTTACCCGGACTGCAGCAGTACGCGGGGTAAGC
TGTGAAACCGTGCATTCAGCAAGACTGCTGTTGTACCCAAGACATACCCT
CGCTACAGCAGCAGAAGCATCCTCCTCCTGCGGTAGGGCCAACGTCGCAC
GAAAACAGGGTGGAGATCAGGGCCGAGCGAAGGCGAGCTCTGCATATTTT
TCTACTCTCCGAAGTTCCTCCAAATGTGTCCCGGTTCGAGGTGGTGCAGT
CCTCAGCACGGCTGCTTCACATCATCCCCCAAGGACGAATACCCATCAGC
AGCAGCAGCGGCAGCAGCGGCGGCGGCGGCAGCAGGAGCAGCAGCGATTG
CTCAGCAGCCGGGATGGGTTCGGTGGGGGGCAGCACTTCCCTCACAGTGA
TCAGGACAGCCTTGGTCTTTTTGGCGGCGACGGCAGGCGACGTGTGATCA
AGCCGGAACGAATCATCATCGTGCGCCACGGGGAGAGTCTAGGGAATCTA
GACGAGTCGACTTACGTCCACGTCCCGGATTGGAAGATTCCGTTGACGAA
AAAAGGCTTCGGGGATGGCCAGAGAGCGGGAGAGAAGATCAAGGAACACA
TCGGGGACAAGCCGCTCTTCATCTACACGTCTCCTTACCTGAGAACGAAG
CAGACCTTGGCCGGGATGGTGGAGGCGTTCGACACCAACTACATCGTGGG
AGTTCGGGAGGAGCCGCGATTGACGGAGCAGCAGTTCGGAAACTTCCAGA
ACTTGGCCACTATTGTCATGTCCAAGGCAGAGCGGGCGCGTTTTGGGCGA
TTCTACTACAGATTCCCGCAGGGCGAGTCTGGACTGGACGTGTATAACCG
GGCAACGTCCTTCATCGCGACCATGTTCAGAGACTTTGCCAACGAGAACA
TCGCCAGGGATGACCTCAACGTTATCATCGTCACGCATGGACTCACGCTG
CGCTTGCTGGTGATGCGGTGGTTCCAGTATTCGATTGCCGACTTCGAGGA
ATCGTTCAACCCGGAGAACGGGAGCTTTGTCGTCATGGAGCGGAGAGAAA
AGGATGACACGGATCCTCGCTTCTTTCGAGAGGTAAACGCGGACCAGCGG
GATCTCAGGCACTGGTACGAGCTGACAGCCGAGAGCCGGGCGCACATCAA
CTTCAAGCAACAGCGGCAATTCGGCTCGCTTTGGAAGCTCCTTTCCGAGC
TACCGGACGAGCCAGGGGTGGTCCCGCAGGAGTTCATGGACAAAAGTTCT
GAGGACGCCAACAAGAAGAACTGA
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