prot_P-littoralis_Contig145.54.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig145.54.1
Unique Nameprot_P-littoralis_Contig145.54.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length214
Homology
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: D7FZ53_ECTSI (Ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ53_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 4.410e-83
Identity = 149/227 (65.64%), Postives = 174/227 (76.65%), Query Frame = 0
Query:    1 MLRSILSTVAPRASAAKRSLATAAARR-APF----------SIDGIGPTSEGAQPLTLDRWALSAATSSSRLISARRCSWRDMSSASAKVASSGGGDSAAYNE---EGVEGEMGS-GRDARDPATGEGIWMDDEDEPLVLEKPKKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRKMPRLD 212
            MLR++L+T+APRA+AA RS A +   R APF          S     P+ +G Q L LD     AA  + R +  RRCSWR+MSSASA VA+ GGGD A   E   EG +GEMGS GR ARDP TGEGIW+D+EDEPL LEKPKKVQKFCGKV++D+MDKTIKVAVPYWY+VRRLG++ IRYSK+MAHDE+NSAN+GDTVILVDCQQKSKRKKHTLL IVRK+PRLD
Sbjct:    1 MLRTVLATIAPRATAASRSRAASGPGRCAPFTAFATRRPSPSPSRFSPSPQGGQSLPLD----CAAAVTIRSVP-RRCSWREMSSASAHVAAPGGGDLAMQGEGGGEGQQGEMGSSGRYARDPVTGEGIWVDEEDEPLDLEKPKKVQKFCGKVISDNMDKTIKVAVPYWYYVRRLGKRIIRYSKMMAHDEENSANVGDTVILVDCQQKSKRKKHTLLKIVRKLPRLD 222          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A1G0F8I5_9GAMM (30S ribosomal protein S17 n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_13 TaxID=1798271 RepID=A0A1G0F8I5_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 2.560e-9
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 0
Query:  125 LEKPKKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRKM 208
            + + K+V+   GKV+++ MDKTI VA+      R   +   R +KI AHDEDN+  IGD V +V+ + KSK K   L  +V ++
Sbjct:    1 MTEQKRVKTLTGKVISNKMDKTIVVAIERQVTHRLYKKSVKRTTKIHAHDEDNTCEIGDIVKIVETRPKSKTKAWALAEVVERI 84          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A089LZZ0_9BACL (30S ribosomal protein S17 n=37 Tax=Paenibacillus TaxID=44249 RepID=A0A089LZZ0_9BACL)

HSP 1 Score: 60.8 bits (146), Expect = 7.310e-9
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:  129 KKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSK-IMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            +KVQ   GKVV+D MDKTI VAV   Y    L  K I+Y+K   AHDE+N+A IGDTV +++ +  SK K+  L+ +V K
Sbjct:    8 RKVQ--IGKVVSDKMDKTIVVAVET-YKKHDLYHKRIKYTKKFKAHDENNTAQIGDTVKIMETRPLSKDKRWRLVEVVEK 84          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A2D9FZ60_9BACT (30S ribosomal protein S17 n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FZ60_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 9.950e-9
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
Query:  136 GKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            G+VV++SMDK+I VAV         G+   + +K MAHDE+N AN+GDTV ++  +  SKRK   L+ IV K
Sbjct:   14 GRVVSNSMDKSITVAVDRKVKHSIYGKYITKTTKYMAHDENNEANVGDTVHIMSTRPLSKRKSWRLVDIVEK 85          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: D3EL98_GEOS4 (30S ribosomal protein S17 n=28 Tax=Paenibacillaceae TaxID=186822 RepID=D3EL98_GEOS4)

HSP 1 Score: 60.5 bits (145), Expect = 1.020e-8
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:  129 KKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSK-IMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            +KVQ   GKVV+D MDKTI VAV   Y    L  K I+Y+K   AHDE+N A IGDTV +++ +  SK K+  L+ +V K
Sbjct:    8 RKVQ--IGKVVSDKMDKTIVVAVET-YKKHDLYHKRIKYTKKFKAHDENNQAQIGDTVKIMETRPLSKDKRWRLVEVVEK 84          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A0C2UCI2_9BACL (30S ribosomal protein S17 n=24 Tax=Paenibacillaceae TaxID=186822 RepID=A0A0C2UCI2_9BACL)

HSP 1 Score: 60.5 bits (145), Expect = 1.020e-8
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:  129 KKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSK-IMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            +KVQ   GKVV+D MDKTI VAV   Y    L  K IRY+K   AHDE+N A IGDTV +++ +  SK K   ++ IV K
Sbjct:    8 RKVQ--IGKVVSDKMDKTIVVAVET-YKKHSLYHKRIRYTKKFKAHDENNEAQIGDTVRIMETRPLSKDKTWRMVEIVEK 84          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A838UYK2_9CHLR (30S ribosomal protein S17 n=1 Tax=Ktedonobacterales bacterium TaxID=2306968 RepID=A0A838UYK2_9CHLR)

HSP 1 Score: 60.8 bits (146), Expect = 1.330e-8
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  122 PLVLEKPKKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSK-IMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            P   + P + Q   GKV++D M KTI VAV   +    L +K  R++K   AHDE+N+A +GDTVI+ + +  SK K+  LL IV++
Sbjct:    4 PEAKKAPHRAQTKTGKVISDKMQKTIVVAVES-FKQHPLYKKNYRWTKHYKAHDEENTARMGDTVIIQETRPLSKEKRWLLLEIVKR 89          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A651GBH4_9BACT (30S ribosomal protein S17 n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A651GBH4_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.390e-8
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  136 GKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            GKVV+D MDK+I VAV         G+   + +K MAHDE+N AN GDTV+++  +  SKRK   L+ I+ +
Sbjct:   14 GKVVSDRMDKSITVAVDRQIKHPIYGKFITKTTKYMAHDENNDANTGDTVLIMSTRPLSKRKSWRLVDIIER 85          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: A0A1B6YC26_9BACT (30S ribosomal protein S17 n=5 Tax=Balneola TaxID=455358 RepID=A0A1B6YC26_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.390e-8
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:  125 LEKPKKVQKFCGKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIVRK 207
            LE+ ++ ++  G+VV++ MDK+I VAV         G+   + +K MAHDE+N ANIGDTV ++  +  SKRK   L++IV K
Sbjct:    4 LERAQRRER-TGRVVSNKMDKSITVAVDRQIKHAIYGKFITKTTKYMAHDENNEANIGDTVHIMSTRPLSKRKTWRLVSIVEK 85          
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Match: H3NWE6_9GAMM (30S ribosomal protein S17 n=7 Tax=Proteobacteria TaxID=1224 RepID=H3NWE6_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 1.460e-8
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  136 GKVVTDSMDKTIKVAVPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHTLLTIV 205
            G+VV+D MDKTI V V         G+   R SK+ AHDEDN A +GDTV++ + +  SK K  TL+ +V
Sbjct:   13 GRVVSDKMDKTITVLVERRVKHPVYGKYITRSSKVHAHDEDNRAGMGDTVLVAESRPMSKTKSWTLVDVV 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ53_ECTSI4.410e-8365.64Ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A1G0F8I5_9GAMM2.560e-939.2930S ribosomal protein S17 n=1 Tax=Gammaproteobacte... [more]
A0A089LZZ0_9BACL7.310e-948.7530S ribosomal protein S17 n=37 Tax=Paenibacillus T... [more]
A0A2D9FZ60_9BACT9.950e-945.8330S ribosomal protein S17 n=1 Tax=Balneola sp. Tax... [more]
D3EL98_GEOS41.020e-848.7530S ribosomal protein S17 n=28 Tax=Paenibacillacea... [more]
A0A0C2UCI2_9BACL1.020e-850.0030S ribosomal protein S17 n=24 Tax=Paenibacillacea... [more]
A0A838UYK2_9CHLR1.330e-841.3830S ribosomal protein S17 n=1 Tax=Ktedonobacterale... [more]
A0A651GBH4_9BACT1.390e-844.4430S ribosomal protein S17 n=3 Tax=Balneolaceae Tax... [more]
A0A1B6YC26_9BACT1.390e-842.1730S ribosomal protein S17 n=5 Tax=Balneola TaxID=4... [more]
H3NWE6_9GAMM1.460e-845.7130S ribosomal protein S17 n=7 Tax=Proteobacteria T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 117..208
e-value: 3.0E-20
score: 73.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 132..208
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 136..202
e-value: 1.1E-18
score: 67.1
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 132..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..112
NoneNo IPR availablePANTHERPTHR10744:SF137S RIBOSOMAL PROTEIN S17, MITOCHONDRIALcoord: 132..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig145contigP-littoralis_Contig145:151222..155073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig145.54.1mRNA_P-littoralis_Contig145.54.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig145 151089..155877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig145.54.1 ID=prot_P-littoralis_Contig145.54.1|Name=mRNA_P-littoralis_Contig145.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp
MLRSILSTVAPRASAAKRSLATAAARRAPFSIDGIGPTSEGAQPLTLDRW
ALSAATSSSRLISARRCSWRDMSSASAKVASSGGGDSAAYNEEGVEGEMG
SGRDARDPATGEGIWMDDEDEPLVLEKPKKVQKFCGKVVTDSMDKTIKVA
VPYWYHVRRLGRKTIRYSKIMAHDEDNSANIGDTVILVDCQQKSKRKKHT
LLTIVRKMPRLDL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR000266Ribosomal_S17/S11