prot_P-littoralis_Contig145.46.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig145.46.2
Unique Name	prot_P-littoralis_Contig145.46.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	475

Homology

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BLAST of mRNA_P-littoralis_Contig145.46.2 vs. uniprot
Match: D7FZ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ51_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.220e-7
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0

Query:  395 GAGKHLAPPGVKRARKPVRARGDNQGWLSGGGGR------GGRARTPGTASRDPVSSFQGSQFAAQKNNDRRLTQSKLKFAI 470
            GA    AP G K+ARK VRA+G+  GW++ GGG       GGR R       +PV SFQGSQ + +KNN+R LTQSK+ F +
Sbjct:  370 GARARSAPSGSKKARKVVRAQGNEHGWIAKGGGSXXXXXXGGRVR-------NPVLSFQGSQISMRKNNERSLTQSKINFPV 444

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig145.46.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig145.46.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FZ51_ECTSI	1.220e-7	48.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..370

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig145	contig	P-littoralis_Contig145:133216..135505 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig145.46.2	mRNA_P-littoralis_Contig145.46.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig145 123815..136407 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig145.46.2 ID=prot_P-littoralis_Contig145.46.2|Name=mRNA_P-littoralis_Contig145.46.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=475bp
MDDRWKPLFRKDGARSGYASSISSRNYSSGESESGDVACDIAQEDTEGVE
KTVDISQDDDFDDDDDDSDYIGMLSSGGDDRNASARLRAARTNIPQTATE
EREGQEWRISSPNRRRNTNSTREASASKGKGRKGEERTADRRWRHGAKTT
EPASSSKANWSVSDAPLYSTSEEEEEFDETEANILGLERPPPSTTPVQLR
QNHDRAAADSSSSSSKKETGGRDGRGVPTAGEGRGLGGAASSPLACDGSS
DDSPLGISSRSKGEEDIESSGSDSDGSDAGSGNDRYYTGGNTINSNRSGG
GGGGSAGQRGSKAPGGRRRSNLFDFGERDASTNDDRGQGKRQNQKGITVI
RERGGGKRSNESRHSSHKSSSSTRSEALGSASVDPASAGGQAEGGAGKHL
APPGVKRARKPVRARGDNQGWLSGGGGRGGRARTPGTASRDPVSSFQGSQ
FAAQKNNDRRLTQSKLKFAIRVDD*