mRNA_P-littoralis_Contig145.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE) HSP 1 Score: 212 bits (540), Expect = 5.040e-65 Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 1
Query: 1 PDQEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPP 330
PDQEWDFIVQHNHSPSSAGAIERDPIL+ MVGEVDARNDPVNGAGLLFPTLAWYEFVFH EN IYHFLR+PYFLG YLGDL AEILRVVTESSEVR+AWAKCCP+AV PP
Sbjct: 164 PDQEWDFIVQHNHSPSSAGAIERDPILQDMVGEVDARNDPVNGAGLLFPTLAWYEFVFHVENGIYHFLRDPYFLGTYLGDLSAEILRVVTESSEVRRAWAKCCPSAVAPP 273
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE) HSP 1 Score: 140 bits (354), Expect = 2.290e-37 Identity = 73/108 (67.59%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 7 QEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPP 330
+EWDFIVQHNHSPSSAGAIERDPILK MVGEVDARNDP GAGLLFPTLAWY DLPAEILRV+TESSEVR+AW KCCP+AV P
Sbjct: 181 KEWDFIVQHNHSPSSAGAIERDPILKDMVGEVDARNDPAAGAGLLFPTLAWY----------------------LSRDLPAEILRVITESSEVRRAWGKCCPSAVAHP 266
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5JA88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA88_9PHAE) HSP 1 Score: 129 bits (325), Expect = 6.180e-35 Identity = 65/109 (59.63%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 4 DQEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPAAVDPP 330
D EW + + +HS SSA AIE D L +V VD R D NGAGLLF +L +Y FV EN YH L PY+LG YLGDLPA LRVV+ES EV+ AWAKCCPAAV+PP
Sbjct: 136 DMEWGWFIPRHHSKSSAAAIETDAHLSNLVAGVDKRIDLKNGAGLLFVSLDFYNFVLMLENGYYHVLHQPYYLGPYLGDLPAGPLRVVSESEEVKDAWAKCCPAAVEPP 244
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: D7G5R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R0_ECTSI) HSP 1 Score: 114 bits (284), Expect = 1.630e-28 Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 4 DQEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCP 312
++EW V N S S A+E+D L+++VGEV RND +NGAGLLF T A++EF + +E +H L P+ LGAYL LP ++LRVV+E++E+R AWA+CCP
Sbjct: 168 EREWVSFVDLNKSASEGAAVEKDKELEHLVGEVKRRNDEINGAGLLFATKAFFEFTYASEIGYFHILSKPFLLGAYLVGLPGDMLRVVSEATEIRDAWAECCP 270
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI) HSP 1 Score: 114 bits (284), Expect = 5.710e-28 Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 4 DQEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCP 312
++EW V N S S+ A+E+D L+++VGEV R+D +NGAGLLF T ++EF + E +H L P+ LGAYLGDLP E LRVV E++ VR AWA+CCP
Sbjct: 226 EREWVSFVDLNKSASAGAAVEKDKELEHLVGEVKRRHDEINGAGLLFATKVFFEFTYALEIGYFHILSKPFLLGAYLGDLPGETLRVVREATAVRDAWAECCP 328
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 110 bits (276), Expect = 4.260e-26 Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 7 QEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPA---AVDP 327
Q+W +VQHN SS AI + +L+ V VD +ND NG GLL+PT+ W EFV+ E I+HFL+NP FL A LG LPAEI +VV+E+ V++ W CCP A+DP
Sbjct: 208 QDWVRVVQHNTRRSSREAIFTNVMLRDFVAGVDQKNDLKNGPGLLYPTMDWVEFVYAVERGIFHFLKNPIFLAACLGGLPAEIFKVVSEAEVVKEMWGNCCPPGPPAIDP 317
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.460e-21 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 13 WDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPA---AVDP 327
W HN S SS + +VD++ND NG+GLL+PT+ W EF + E I+HFL+ P FL A LGDLPAEI++VV+E+ V++ W CCP A+DP
Sbjct: 49 WTHQRSHNLSVSSNTTL---------AAKVDSKNDMKNGSGLLYPTVEWVEFKYAVERGIFHFLKKPIFLAACLGDLPAEIVKVVSEAEVVKEMWGNCCPPGPPAIDP 147
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 4.190e-17 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 10 EWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTLAWYEFVFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPA 315
EW +IV + PS A + L+ + EV RNDP GL+F T + + + E+ +H L P FLG+YLG+LP EILR+V+ES V++AW CC A
Sbjct: 237 EWMWIVDRHKYPSKRAAEGNEMELRGVTEEVQRRNDPTRPRGLVFVTSLFLKLLLTLESGYFHVLSQPAFLGSYLGNLPEEILRLVSESPTVQRAWDACCQA 338
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Match: A0A6H5K3B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B5_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 6.070e-10 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 169 VFHAENKIYHFLRNPYFLGAYLGDLPAEILRVVTESSEVRKAWAKCCPA---AVDP 327
V+ E I+HFL NP FL A LG+LPAEI +VV+ES V++ W CCP A+DP
Sbjct: 44 VYVVERGIFHFLENPIFLAACLGELPAEIFKVVSESEVVKEMWGNCCPPGPPAIDP 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig145.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig145.19.1 >prot_P-littoralis_Contig145.19.1 ID=prot_P-littoralis_Contig145.19.1|Name=mRNA_P-littoralis_Contig145.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp PDQEWDFIVQHNHSPSSAGAIERDPILKYMVGEVDARNDPVNGAGLLFPTback to top mRNA from alignment at P-littoralis_Contig145:30585..30926+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig145.19.1 ID=mRNA_P-littoralis_Contig145.19.1|Name=mRNA_P-littoralis_Contig145.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig145:30585..30926+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig145:30585..30926+ >mRNA_P-littoralis_Contig145.19.1 ID=mRNA_P-littoralis_Contig145.19.1|Name=mRNA_P-littoralis_Contig145.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig145:30585..30926+ (Pylaiella littoralis U1_48)back to top |