prot_P-littoralis_Contig1442.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1442.5.1
Unique Nameprot_P-littoralis_Contig1442.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length104
Homology
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.600e-20
Identity = 54/80 (67.50%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    1 MRTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDRSEWLSITETEIMVVPGDGVPSSPAPTTSGTPAPV 80
            +RTVDV+VDG L TTWTSSGTT  FE++D+S  SGQ +TVTGVLD SEW+SITET+IMV+  D V S P+P+T+ TPAPV
Sbjct:  268 VRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITETDIMVL-SDSVVSPPSPSTT-TPAPV 345          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.770e-19
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MRTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGV-LDRSEWLSITETEIMVVPGDGVPSSPAPTTSGTPAP 79
            +RTV V+VDGDLVTTWTSSGTT  FES+DMS  +GQV+T+TG  L  SEWLSI ETEIMV   +GV   P+PTT  TP+P
Sbjct:  262 VRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIMVY--NGVAPPPSPTTPATPSP 339          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 4.060e-19
Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 MRTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDRSEWLSITETEIMVVPGDGV---PSSPAPTTSGTPAPVST 82
            +RTVDVSVDG L TTWTSSGTT  FE+ID+S  SGQ ITVTGVLD  EWLSI ETEIMV+  DGV   PS+ +PT +   APV+T
Sbjct:  266 VRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKETEIMVL-SDGVVFPPSASSPTPAPVFAPVAT 349          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.230e-17
Identity = 60/107 (56.07%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    1 MRTVDVSVDGDLVTTWTSSGTTLDFESIDMSE-ISGQVITVTGVLDRSEWLSITETEIMVVPGDGV--PSSPAPTTSGTPAPVSTAPPASEPAGVLRTVGLTPLARG 104
            +RT+DVSVDG LV TWTSSGTT  FESI   + +SG VI + GVLD SEWLSI ETEIMV P + V  P +PA T        +T  P   P G L+ VGL PLA G
Sbjct:  328 VRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPLATG 434          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.940e-16
Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    2 RTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDR-SEWLSITETEIMVVPGDGVPSSPAPTTSG------TPAPVS 81
            RTVDVSVDG LVTTWTSSGTT +FES+D+S   GQV+T++G     S+WLSI ETEIMV  GD    +P+PTT        TP+PVS
Sbjct:  266 RTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMVYEGDAP--APSPTTPPPVVMPMTPSPVS 350          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 2.980e-9
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    2 RTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDRSEWLSITETEIMVVPGD 63
            RT+D+S+D    TTWTSSGTT  +E+I++  ++ Q I+V GVL+ SEWLSI E EIM+  G+
Sbjct:  113 RTLDISIDNLPYTTWTSSGTTTGYETIELDTMA-QWISVVGVLEDSEWLSIMEVEIMIEDGE 173          
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.650e-8
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    2 RTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDRSEWLSITETEIMVVPGD 63
            RT+++S+D    TTWTSSGTT  FE+I++  + G+ I++ GVL  SEWLSI E +IM+  G+
Sbjct:   95 RTLEISIDNLPYTTWTSSGTTTGFETIELDTM-GRWISIVGVLADSEWLSIMEVKIMIDDGE 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1442.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KL74_9PHAE4.600e-2067.50F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FL48_ECTSI2.770e-1966.25Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5KFA6_9PHAE4.060e-1967.06F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FZZ4_ECTSI1.230e-1756.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V3_9PHAE4.940e-1659.77F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI2.980e-953.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE6.650e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1442contigP-littoralis_Contig1442:16701..17453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1442.5.1mRNA_P-littoralis_Contig1442.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1442 16701..17480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1442.5.1 ID=prot_P-littoralis_Contig1442.5.1|Name=mRNA_P-littoralis_Contig1442.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
MRTVDVSVDGDLVTTWTSSGTTLDFESIDMSEISGQVITVTGVLDRSEWL
SITETEIMVVPGDGVPSSPAPTTSGTPAPVSTAPPASEPAGVLRTVGLTP
LARG
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