mRNA_P-littoralis_Contig144.124.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: D7FZZ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ9_ECTSI) HSP 1 Score: 532 bits (1370), Expect = 4.920e-169 Identity = 318/506 (62.85%), Postives = 358/506 (70.75%), Query Frame = 1
Query: 1 EVDYWEEVTAEDGSPWFYNHTSQEYASSLPSNNATAPSVESPVAADYKKAQSGTAAWGRGNENDLEKWGGQQVWDGVDGEVFVPWPEEEPQEAMKASPEVVGSSDDILEKPEAEDEENGEPFIPDDPTIVREQNLRALLVLLPAKVVSVVVRAAMEGAVLHARRTATAMAERRRRSLLSSRAQFRHNMEKKPKGGAKQEGDGGMDDEMETDTTTEGET--ALESPDSWRNTTTQERDTLVGHKLQEVLRVLFSTSEEEARLTMRAIYLSSQGIGAIGARQLAPALKSCVIVALHLGNNAIGDVGVASLADGLRHARGLQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDPGAWKTINVRRKEGTGWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGNDFGSKADESDSESAAGLLSFGLQA--RCCY 1506
EVDYWEEV EDG+ FYNHT QEY S LP+N+AT + A +AQ TA ++N LE GQ VWDGVDGEVFVPWP+EE M+ASP+ V + + LE E +DEE PF PDDP +VREQNLRALLVLLPAK+++ V++AAMEGA+LH RRTATA AE+RRR LLSSRAQFRH +K +G K + G DDE E T EGET + E+PDS RNTTTQERDT+VGHKLQEVLRVL+STS EEAR+TMRAIYLSSQGIGA GA+QLAPALK CVIVALHLGNNA+GD G+ SLADGLRHARGLQKL LS+AIYLSQ GCPLRSL++AGCLDVDP AWKTINVR KEG W+ PRPGDDG VSLAAAL+SPHGC LRRLR+ANAGMK GAKAIA ALCAN TLET+D+SGNDFGS D S ESAA LLSFGLQA R CY
Sbjct: 26 EVDYWEEVALEDGTVCFYNHTRQEYFSLLPANDAT-----NGCPASVDEAQP-TAVGEFSHDNSLEPLEGQ-VWDGVDGEVFVPWPDEE----MRASPDAVVAHNKALETTEGDDEE---PFTPDDPAVVREQNLRALLVLLPAKLMNGVIKAAMEGAMLHTRRTATADAEKRRRLLLSSRAQFRHTAKKNCQGDMKHKDGDGFDDETEEGPTAEGETVDSAETPDSRRNTTTQERDTIVGHKLQEVLRVLYSTSTEEARVTMRAIYLSSQGIGAAGAQQLAPALKDCVIVALHLGNNALGDKGLCSLADGLRHARGLQKLXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLAIYLSQQGCPLRSLSLAGCLDVDPAAWKTINVRGKEGMRWDPPRPGDDGAVSLAAALISPHGCPLRRLRMANAGMKTIGAKAIATALCANRTLETVDVSGNDFGSTTDASAWESAADLLSFGLQASGRACY 506
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A6H5KJE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE5_9PHAE) HSP 1 Score: 196 bits (497), Expect = 1.100e-53 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 4438 MLRGSGEEDEEGNPILPEIDERFLTAGQRLRRLRDAREAARREWHRKYMEYSRQLKRNLRVRKRLVLAEKQAGRIAQTMDTKQLVEALRQRGGSIEEDGASQEELDSARLRRVYVERIQSEMRVRLHATSRWTKSRNKHRGKSKNDNTVEIGEIVARRQERLLLPPEKNAADSSPFSAKRSTARH 4992
MLRGSGEEDEEGNPILPEID+RFLT GQRLRRLRDAR+ RE R ++EYSRQ+K NLR RKR VLAEK+AGRIA++MDTKQLVEAL++RG + + E+LD LRRV++E IQ E+RVRLHATSRWTKSRNKHR ++ +TVE+GEIVARRQ+ L K SP R RH
Sbjct: 1 MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLEYSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATK----GSEQLDQ--LRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERT---DTVEVGEIVARRQQ---LTSSKRVTPFSPSPITRLNVRH 173
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A836CKC6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC6_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.370e-18 Identity = 102/350 (29.14%), Postives = 126/350 (36.00%), Query Frame = 1
Query: 904 GVASLADGLRHARGLQKLHLNNNEARRDEPPPRPPITDVGCQRLANALA-PLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDPGAWKT-----INVRRKEGTGWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGNDFGSKADESDSESAAGLLS--------------------FGLQARCCYAVNRTVHTIVLRACGLSREQVNAVQGNASPQKSGARTSHRREKXXXXXXXXXXXXXXXXSRLPNVGSXXXXXXVGYGTGEDRACCVKRGPLPWREEKRLGFRAACLIDWLLDAVRIKGMRYPR 1875
G A+LA LRHAR L+ LHL +N + D G + LA A A P L + +L++ G + G ++ PGD+G V LAAAL+SPHGC L+RLRL NA + A G +AIAAAL LE LDLSGND SD ++AA LL + ++ LRACGLS Q+ +RL A PL W EEKRLG A L WLLDA KG YPR
Sbjct: 266 GAAALAAALRHARALRALHLASNS-----------VGDAGARALAAAAAAPHPTLAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLGGAVTSLVGVYQAGGSTAAXXXXXXXXXXXXXXPGDEGAVCLAAALLSPHGCALQRLRLVNARLGAAGVRAIAAALHCRSALEELDLSGNDL------SDVDTAALLLRAIRVAAXXXXXXXXXXXXXXXXXXXXXXXXXEGRLRSVALRACGLSGAQLAEA-----------------------------------ARLTGA-----------------AXXXXXXPLTWAEEKRLGAEGAALRAWLLDAAAGKGFEYPR 546
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: D7FZZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ8_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 2.530e-10 Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1
Query: 4447 GSGEEDEEGNPILPEIDERFLTAGQRLRRLRDAREAARREWHRKYMEY 4590
GSGEEDEEGN ILPEID+RFLT GQRLRRLRDAR+ +RE HR +M+Y
Sbjct: 190 GSGEEDEEGNRILPEIDDRFLTVGQRLRRLRDARDNLQREKHRAHMKY 237
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A7J7WAB9_RHIFE (Ribonuclease inhibitor n=2 Tax=Microchiroptera TaxID=30560 RepID=A0A7J7WAB9_RHIFE) HSP 1 Score: 72.8 bits (177), Expect = 3.670e-9 Identity = 62/192 (32.29%), Postives = 81/192 (42.19%), Query Frame = 1
Query: 871 LHLGNNAIGDVGVASLADGLRHARG-LQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDPGAWKTINVRRKEGT-------GWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGN 1422
L+LGNN +GD G+A L GL L+ L L + IT GC+ L L + L L + N GDE + L +P C L SL V C + + T G N + GDDG L L P G LR L L + M +G ++AA L NH+L LD+S N
Sbjct: 302 LYLGNNKLGDAGIAELCPGLLSPSSQLKTLWLWECD-----------ITASGCRHLCRVLRTKESLKELSMAGNEMGDEGARLLCDTLLEPSCRLESLWVKSC-SFTAACCQHFSTMLARNTCLLELQLGSN--KLGDDGVQELCTGLSQP-GTTLRELWLGDCEMTNSGCSSLAALLLTNHSLRQLDVSNN 478
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A671E031_RHIFE (Ribonuclease inhibitor n=6 Tax=Rhinolophus TaxID=49442 RepID=A0A671E031_RHIFE) HSP 1 Score: 72.8 bits (177), Expect = 4.150e-9 Identity = 62/192 (32.29%), Postives = 81/192 (42.19%), Query Frame = 1
Query: 871 LHLGNNAIGDVGVASLADGLRHARG-LQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDPGAWKTINVRRKEGT-------GWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGN 1422
L+LGNN +GD G+A L GL L+ L L + IT GC+ L L + L L + N GDE + L +P C L SL V C + + T G N + GDDG L L P G LR L L + M +G ++AA L NH+L LD+S N
Sbjct: 358 LYLGNNKLGDAGIAELCPGLLSPSSQLKTLWLWECD-----------ITASGCRHLCRVLRTKESLKELSMAGNEMGDEGARLLCDTLLEPSCRLESLWVKSC-SFTAACCQHFSTMLARNTCLLELQLGSN--KLGDDGVQELCTGLSQP-GTTLRELWLGDCEMTNSGCSSLAALLLTNHSLRQLDVSNN 534
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: S7P0K2_MYOBR (Ribonuclease inhibitor n=2 Tax=Myotis brandtii TaxID=109478 RepID=S7P0K2_MYOBR) HSP 1 Score: 70.9 bits (172), Expect = 1.160e-8 Identity = 72/229 (31.44%), Postives = 96/229 (41.92%), Query Frame = 1
Query: 781 MRAIYLSSQGIGAIGARQLAPALKSCVIVA-------LHLGNNAIGDVGVASLADGLRHARG-LQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSL-------AVAGCLDVDPGAWKTINVRRKEGTGWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGN 1422
+ AI L G+ A + L C IVA L LGNN +GD G+A L GL L+ L L + T GC+ L L + L L + N GDE + L +P C L SL VA C V + +++ E + NL GD+G L L P G LR L + + + G ++AA L ANH+L LDLS N
Sbjct: 195 LEAIRLEGCGLTAANCQDL------CGIVAAKASLNELQLGNNKLGDAGIAELCPGLLSPSSRLKTLWLWECD-----------FTASGCKDLCRVLTAKESLKELSVAGNEVGDEGARLLCESLQEPSCRLESLWLKSCGLTVACCPHVSAMLAQNRSLQELEMSNNNL---GDEGMELLCQGLRQP-GVTLRMLSVGDCEVTDQGCTSLAALLLANHSLLELDLSNN 402
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A6P3FHY6_OCTDE (Ribonuclease inhibitor n=1 Tax=Octodon degus TaxID=10160 RepID=A0A6P3FHY6_OCTDE) HSP 1 Score: 70.5 bits (171), Expect = 1.540e-8 Identity = 67/229 (29.26%), Postives = 99/229 (43.23%), Query Frame = 1
Query: 763 EEARLTMRAIYLSSQGIGAIGARQLAPALKSCVIVA-LHLGNNAIGDVGVASLADGLRHAR-GLQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDPGA--WKTINVRRKEGTGWNLPRP--GDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGNDFG 1431
+++ + ++L + G+ A ++L L + + L LGNN +GDVG+A+L L H L+KL L + IT GC+ L L + L L L N GDE + L P C L L V C ++++ + K T L GD G L AL PH L+ L L + + ++ +A L A H+L LDLS N G
Sbjct: 190 KDSACPLETLWLENCGVTAASCKELCDVLAAKPSLQDLDLGNNRLGDVGIAALCSCLLHPSCRLKKLWLWECD-----------ITAGGCRDLCQVLRAKQSLKALSLMLNGLGDEGARLLCEALQAPTCQLECLWVKECSFTAACCPYFRSVLAQNKFLTELQLSENNLGDSGVQELCQALGQPHSV-LQVLGLGDCNLTSSSCSNLALVLLACHSLRELDLSNNGLG 406
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: UPI0013F2FF14 (ribonuclease inhibitor isoform X1 n=2 Tax=Lontra canadensis TaxID=76717 RepID=UPI0013F2FF14) HSP 1 Score: 68.6 bits (166), Expect = 7.030e-8 Identity = 59/189 (31.22%), Postives = 84/189 (44.44%), Query Frame = 1
Query: 871 LHLGNNAIGDVGVASLADGLRHAR-GLQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGCLDVDP--GAWKTINVRRKEGTGWNLP--RPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGN 1422
L LG+N +GD G+A+L L H+ ++ L L + + IT GC+ L L + L + L N GDE + L +PGC L+SL V C ++ + R K T L + GD G L L P G LR L L + + G ++A+ L N +L LDLS N
Sbjct: 266 LDLGDNKLGDQGIATLCSSLLHSSCQIRVLWLWDCD-----------ITTTGCRDLCRVLRAKQSLKEMSLAGNVLGDEGARLLCESLLEPGCQLQSLWVKSCSLTAACCASFGAMLARNKHLTELQLSDNKLGDAGVRELCQGLRQP-GAALRELCLGDCDVANDGCASLASLLLVNRSLRELDLSNN 442
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Match: A0A2Y9K0N3_ENHLU (Ribonuclease inhibitor n=5 Tax=Mustelidae TaxID=9655 RepID=A0A2Y9K0N3_ENHLU) HSP 1 Score: 66.6 bits (161), Expect = 2.510e-7 Identity = 59/190 (31.05%), Postives = 83/190 (43.68%), Query Frame = 1
Query: 871 LHLGNNAIGDVGVASLADGLRHAR-GLQKLHLNNNEARRDEPPPRPPITDVGCQRLANALAPLKVLYTLDLCHNPFGDEACLSIAIYLSQPGCPLRSLAVAGC-----LDVDPGAWKTINVRRKEGTGWNLPRPGDDGTVSLAAALVSPHGCRLRRLRLANAGMKATGAKAIAAALCANHTLETLDLSGN 1422
L LG+N +GD G+A+L L H+ ++ L L + + IT GC+ L + + L + L N GDE + L +PGC L+SL V C V GA N E + + GD G L L P G LR L L + + G ++A+ L N +L LDLS N
Sbjct: 227 LDLGDNKLGDQGIATLCSSLLHSSCRIRVLWLWDCD-----------ITTTGCRDLCRVIRAKQSLKEMSLAGNALGDEGARLLCESLLEPGCQLQSLWVKSCSFTAACCVSFGAMLAQNKHLTE-LQLSNNQLGDAGVRELCQGLRQP-GAALRELCLGDCDVANDGCASLASLLLVNRSLRELDLSNN 403 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.124.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig144.124.3 >prot_P-littoralis_Contig144.124.3 ID=prot_P-littoralis_Contig144.124.3|Name=mRNA_P-littoralis_Contig144.124.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1580bp MKASPEVVGSSDDILEKPEAEDEENGEPFIPDDPTIVREQNLRALLVLLPback to top mRNA from alignment at P-littoralis_Contig144:428805..446410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig144.124.3 ID=mRNA_P-littoralis_Contig144.124.3|Name=mRNA_P-littoralis_Contig144.124.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=17606bp|location=Sequence derived from alignment at P-littoralis_Contig144:428805..446410- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig144:428805..446410- >mRNA_P-littoralis_Contig144.124.3 ID=mRNA_P-littoralis_Contig144.124.3|Name=mRNA_P-littoralis_Contig144.124.3|organism=Pylaiella littoralis U1_48|type=CDS|length=4740bp|location=Sequence derived from alignment at P-littoralis_Contig144:428805..446410- (Pylaiella littoralis U1_48)back to top |