prot_P-littoralis_Contig144.110.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig144.110.1
Unique Name	prot_P-littoralis_Contig144.110.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	930

Homology

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BLAST of mRNA_P-littoralis_Contig144.110.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 9.240e-30
Identity = 231/682 (33.87%), Postives = 282/682 (41.35%), Query Frame = 0

Query:    2 VGACGLVVGCTGDKELTVITQEELGALGSLQQVHLFVKLSALRLGGVWCGDCHKSLVDATSGGNQQHQQQELQPETGRKRDHAEISEATAHQPPLSSPQQQELQNQPTXXXXXXXXXXXXPALPVLPLATSEVAATQEPRELAARELAAMR-DAPSEATTPSIDATS------------AEMPSGPRLNITSPYIPPREEAPSGVNLPV-LAPAVENGVNGGTGDASNGAKCDSSNSVDGNNGGGYPVAAPHAVYGAPPPPALPI-TPVSIPPTPATSGDGSGAFGGGDETGVAAGTGVTTTTTGALALSSVAKMPQWSVPMP-AQVAPAVSQQ------------------------FPALPASSTLQ---------QMIAMAATTAAMEAVHQHQFPLPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DGAPLEGVALPPGQHFPQQLQQVAGFAGLEGGLNPPEATAAATTTTHEETTPSQFGPPLTGMGAPTSPTTAVVSTAMHGLTAAEGQVAYPAWMPSMLPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASSNPPSLSHS----ILVTPIPIRRSRDEVLDASIECFFPGCHTRPSYGMKGDKKPSVCVDHRTDGMVGIKYTRSRICD 627
            VG CGLV GC GDK++T ITQE+L  LGSL+ V LFVKLSALR+GG+WC DCH+ L +A SG  QQ   Q+LQPE+GRKRDHAE      H+ P   P                                  VA   + RE     LAAMR + PS+A +    AT              E   G   + ++PY  P   A   VNL   L P++ENG  G +   + G                       A+     PPALP  T  +   +PA  G        G+E  VA             A ++ A +P  S P+P A VA A                            + A P S   Q         QM AM A T+AMEA +Q   PL QHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                GAP  G A+   +                                         GP   G GAPTSPT ++     HG  AA GQ+ YP WM  +LPQQQ                                                     +P  + H+      +     RR  + VL+   EC   GC TRPSYGM+GDK+P+ CVDH   GMV +K++RSR CD
Sbjct:    7 VGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQQ---QQLQPESGRKRDHAETM---THERPQPQPL---------------------------------VAPPGDTREPVGHGLAAMRGNTPSDAASTPQAATXXXXXXXXXXXXPVEEADGSTYSDSAPY--PSPPAAPEVNLAAALPPSIENGAGGESAGGATG----------------------QALM----PPALPAGTGSTTLVSPAAEG--------GNEASVAQ-----------AAAAAAAPLPGASQPVPLAGVATATQXXXXXXXXXXXXXXXXXXXXXXAVALYGATPVSGVPQAALWPQQALQMAAMEAATSAMEAANQLP-PLQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGLLGGTVIRVGPAGAPAGGPAVSMHETVVPLXXXXXXXXXXXXXXXXXXXXXXX-----------XXGP---GEGAPTSPTASI-----HGAPAAVGQLPYPVWMGPVLPQQQQDSQGAGGSGVSARSPKSRSGVMGGRKGVGLGGGGGIDLNGRLL--------QHPAYVMHAGGALESLETAERRRQEELVLEDYDECCVSGCATRPSYGMEGDKRPTACVDHAAIGMVIVKHSRSRCCD 574

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig144.110.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig144.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5LBA6_9PHAE	9.240e-30	33.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043822	EsV-1-7 cysteine-rich motif	PFAM	PF19114	EsV_1_7_cys	coord: 740..771 e-value: 2.7E-5 score: 24.6 coord: 816..850 e-value: 1.2E-4 score: 22.6 coord: 585..616 e-value: 4.2E-4 score: 20.9 coord: 778..811 e-value: 8.3E-7 score: 29.5 coord: 892..924 e-value: 0.0054 score: 17.3 coord: 702..735 e-value: 1.5E-5 score: 25.4 coord: 854..887 e-value: 1.3E-6 score: 28.9 coord: 664..698 e-value: 2.1E-7 score: 31.4 coord: 626..660 e-value: 1.3E-4 score: 22.5
None	No IPR available	GENE3D	6.10.140.110		coord: 759..819 e-value: 2.9E-6 score: 29.5 coord: 832..882 e-value: 1.8E-5 score: 26.9 coord: 680..743 e-value: 1.3E-9 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 492..561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig144	contig	P-littoralis_Contig144:376524..379938 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig144.110.1	mRNA_P-littoralis_Contig144.110.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig144 376495..379938 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig144.110.1 ID=prot_P-littoralis_Contig144.110.1|Name=mRNA_P-littoralis_Contig144.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=930bp
MVGACGLVVGCTGDKELTVITQEELGALGSLQQVHLFVKLSALRLGGVWC
GDCHKSLVDATSGGNQQHQQQELQPETGRKRDHAEISEATAHQPPLSSPQ
QQELQNQPTPDPQLQLKQEQPPALPVLPLATSEVAATQEPRELAARELAA
MRDAPSEATTPSIDATSAEMPSGPRLNITSPYIPPREEAPSGVNLPVLAP
AVENGVNGGTGDASNGAKCDSSNSVDGNNGGGYPVAAPHAVYGAPPPPAL
PITPVSIPPTPATSGDGSGAFGGGDETGVAAGTGVTTTTTGALALSSVAK
MPQWSVPMPAQVAPAVSQQFPALPASSTLQQMIAMAATTAAMEAVHQHQF
PLPQHHPPPQLQAALHHHSTPAQQLLPPPYQLPQHHHHQQQHQQQQQQQQ
QDGAPLEGVALPPGQHFPQQLQQVAGFAGLEGGLNPPEATAAATTTTHEE
TTPSQFGPPLTGMGAPTSPTTAVVSTAMHGLTAAEGQVAYPAWMPSMLPQ
QQQQQQQQQQQSQDIRGDGGTGSTASAAAGASAAVAGGHEGGDVGGEGGD
GSASSNPPSLSHSILVTPIPIRRSRDEVLDASIECFFPGCHTRPSYGMKG
DKKPSVCVDHRTDGMVGIKYTRSRICDFNDCQEYPSYNFKGKRRPRRCEA
HLLDGMVDVKAPCCDHPGCSTLPYYGEGKDKKRRRCALHRLPGMVDVKSR
RCEFEGCITQPTYGVQGDVKAKRCAKHRDQGMINIVHRHCEFPGCTVQPY
YGLEGNRGGSHCAAHKLPGMVKTKGQRCIHPGCSTRPSYGNDGDKKPSMC
GKHKLMGMVDVINRRCEEPGCVTQPTHAVEGSNLSTRCAVHHLPGMVNIK
SRRCGFEGCNTQPYYGMPGDKRGSRCSKHKEKDMVDVHNRRCTFENCRVS
ASFGIKEDGKGATHCAKHKLPHMTPLYRRK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043822	EsV_1_7_cys