prot_P-littoralis_Contig144.104.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A6H5L4R0_9PHAE (RNase H type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R0_9PHAE) HSP 1 Score: 596 bits (1536), Expect = 7.870e-199 Identity = 381/581 (65.58%), Postives = 424/581 (72.98%), Query Frame = 0
Query: 1 MVKKLPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANQVDDAGGALSPAPAGWSTMWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVASTPPNAAAAXXXXXXXXXXXXXXXAPSAMPG---IVPTLPGIGGSAATPTPPLLSA----SLPKPS----SIMGTGGDIL-------SSSSPVPRSIDEAREVAAXXXXXXXXXXXXXXXXXXXXXXXXXGAGVNSMSGLRVAGGATAREAWMSAATAPGLLAEPSARRYIVHLASWRKSAAEAGAASAILHEEVWWKHLNVLLRVSRCARPPQMQPEGDKHRSGAAAERRGLSAASNALRILGQVLDEIDLLGGGKVAVVTNEPAVVDLLLAGINISIDHPGLPILPTVRHVLKRWSDMGGILIDPSDDNELTSAVMLARCCSEPPPVSAPGWNAPGTAVSGVSGAGPVAGMDSDANA-ISFLTSG 562
MVKKLPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYAN VD+ GG L+PAPAGWST+WFDGGCRGNPGPSGAGAVIF+D +KELYSGYKYLGEGKTNNEAEYESVILGL+AA KLSI Q+VVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGV +T PNAA XXXXXXXXXXXXXXX IVPTLPGIGGSA T +A +LP PS SI+ D +S S VPRSI+EARE XXXXXXXXXXXXX G GV S SGL+V G AR W S AT G L E S R++VHLASWRK+ + GA +AI+ EE +K L A P E +K R+ AA +RRGLSAA LR+L QVLDEI+ +GGG VAVVTNEPA+VDLL G + + P L + ++ RW + G L+DP+++NEL A MLARCC+EPPPVS WN G A +G A A D+DA+A +SFL SG
Sbjct: 1 MVKKLPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVDEGGG-LNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPTLPGIGGSAGTTVASTSAAPAPVTLPPPSLKXPSILPGATDAYPPPPASAASVSAVPRSIEEAREXXXXXXXXXXXXXXXXDARASIAA----GGGVTSTSGLKVPDGQAARAMWASLAT--GSLTESSPPRFLVHLASWRKTETDLGAVAAIVQEERMFKRLT--------APPGVPAAEAEKRRAAAADQRRGLSAAGTGLRVLAQVLDEIEQIGGGNVAVVTNEPALVDLLSPGFRANSEDPAL------QAIVTRWRNASGYLLDPAEENELAPAFMLARCCAEPPPVSTLSWNGAGAAATGGITA---AANDADADAAVSFLLSG 557
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: D7FZY9_ECTSI (Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY9_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 5.580e-160 Identity = 322/479 (67.22%), Postives = 353/479 (73.70%), Query Frame = 0
Query: 27 VVAKTNGFPGADFRKFKTPEEATDYANQVDDAGGALSPAPAGWSTMWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVASTPPNAAAAXXXXXXXXXXXXXXXA---PSAMPGIVPT----------LPGIGGSAAT--------PTPPLLSASLPKPSSIMGTGGDIL-------SSSSPVPRSIDEAREVAAXXXXXXXXXXXXXXXXXXXXXXXXXGAGVNSMSGLRVAGGATAREAWMSAATAPGLLAEPSARRYIVHLASWRKSAAEAGAASAILHEEVWWKHLNVLLRVSRCARP--PQMQPEG------DKHRSGAAA--ERRGLSAASNALRILGQVLDEIDLLGGGKVAVVTNEPAVVDLL 467
+V TNGFPGADFRKFKTPEEATDYAN VD+ GG L+PAPAGWST+WFDGGCRGNPGPSGAGAVIF+D +KELYSGYKYLGEGKTNNEAEYESVILGL+AA KLSI Q+VVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGV +T PNAAA XXXXXXXXXXXXXXX P+A LPGIGGSA T P P L + KP SI+ D +S+S VPRSI+EAREVAAXXXXXXXXXXXXX G GV S SGL+V G AR W S AT G LAE S R++VHLASWRK+ + GA +AI+ EE +K L +LRV+RCA P P P G +K R+ AAA RRGLSAA LR+L QVLDEI+ +GGG VAVVTNEPA+VDLL
Sbjct: 4 LVRLTNGFPGADFRKFKTPEEATDYANLVDEGGG-LNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAAXXXXXXXXXXXXXXXXXXXXPAAXXXXXXXXXXXXXXXXXLPGIGGSAGTTVASTSAAPAPVTLPPASLKPPSILPGATDAYPPPPVSAASASAVPRSIEEAREVAAXXXXXXXXXXXXXDARASIAA----GGGVTSTSGLKVPDGQAARAMWASLAT--GSLAESSPPRFLVHLASWRKTETDLGAVAAIVQEEGMFKRLTPVLRVTRCATPAQPAQAPPGVPAAEAEKRRAVAAAADHRRGLSAAGTGLRVLAQVLDEIEQIGGGNVAVVTNEPALVDLL 475
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A6U1LVX6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LVX6_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.390e-31 Identity = 93/235 (39.57%), Postives = 123/235 (52.34%), Query Frame = 0
Query: 9 YGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDY-------------------ANQ--------VDDAGGALSP--------APAGWS----TMWFDGGCRGNPGPSGAGAVIF--DDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKS 202
Y I GR P +V +W E + GF GA F+ F EA + ++Q V+ GGA P AP + M+FDG RGNPG GAGAVI+ D + +L+ GY+YLGE TNNEAEY + +LGL+AA I+ + V GDSMLVI Q GKW+V+A L+ LH A ++++ + HVPR+ N AD LAN A+DSKS
Sbjct: 7 YAIANGRNGPKIVRTWKECSQEVQGFSGAVFKGFSEQAEAETFLLMYGVSADLQESPGEENKSSQRPNLAKAWVEQHGGARDPLEDEMEEKAPEKPAQDRPVMFFDGASRGNPGEGGAGAVIYTSDSFENQLWRGYRYLGEC-TNNEAEYTAFLLGLQAAADAGIQNLKVCGDSMLVINQATGKWKVNAENLMPLHENAKKLIRTMP-GLSLRHVPREENTVADGLANQALDSKS 239
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A535LZB1_9CHLR (Ribonuclease HI family protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535LZB1_9CHLR) HSP 1 Score: 115 bits (287), Expect = 8.430e-26 Identity = 62/127 (48.82%), Postives = 87/127 (68.50%), Query Frame = 0
Query: 75 DGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSK 201
DGG RGNPGP+ G VI DD+ ++L + +K+LG TNN+AEY+++I GL+A + V DS LV++Q+ GKW+V P+L GLHRQA++++KQ K T HV R+ N RAD L N+A+D K
Sbjct: 44 DGGARGNPGPAALGVVIEDDQGEKLRTFHKWLGVA-TNNQAEYQALIEGLKAMKDWEFDHLDVYMDSKLVVEQVNGKWKVKEPELQGLHRQATDLLKQFGDKVTVQHVAREENRRADKLVNMAIDEK 169
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.170e-25 Identity = 57/133 (42.86%), Postives = 83/133 (62.41%), Query Frame = 0
Query: 72 MWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMD 204
+ FDGG RGNPG +GAG V++D+ E++ G YLGE TNNEAEY ++ GL+ A + + IVV+GDS L+++Q+ GK++ + KL+ ++K H+PR+ N RAD LAN AMD + D
Sbjct: 13 LQFDGGSRGNPGTAGAGMVLYDEVGHEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFN-SFEVRHIPREQNFRADELANEAMDWREND 144
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A481ZGX4_9VIRU (Ribonuclease H n=1 Tax=Pithovirus LCPAC406 TaxID=2506599 RepID=A0A481ZGX4_9VIRU) HSP 1 Score: 110 bits (276), Expect = 6.760e-25 Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 0
Query: 71 TMWFDGGCRGNPGPSGAGAVIF--DDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAM 198
T++FDG +GNPGPSG G VI DD DKELY G ++LG TNN AEY+++I GL+ A K +I Q+VVKGDS L+I+Q+ +W+ A L L ++ ++VKQ K T+ +PR N RAD L N+A+
Sbjct: 3 TLYFDGCSKGNPGPSGTGYVIIYDDDDDKELYFGMEFLGHA-TNNVAEYKALIFGLKDAQKNNITQLVVKGDSKLIIKQVSLQWKCKAEHLKPLLKECLQLVKQIG-KVTFEWIPRSENKRADNLCNLAL 130
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A1Q8A7I5_9CHLR (RNase H type-1 domain-containing protein n=2 Tax=unclassified Chloroflexi TaxID=189774 RepID=A0A1Q8A7I5_9CHLR) HSP 1 Score: 112 bits (279), Expect = 7.560e-25 Identity = 64/153 (41.83%), Postives = 95/153 (62.09%), Query Frame = 0
Query: 72 MWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQ---HQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVASTPPNAA 221
++ DG RGNPGP+GAGA++ DD+ + K+LG TNN AEY +ILGL A++ I+ I V+ DS+LV++QM G+W++ P+L L R A E++ + H+++ HVPR+ N RAD L+N A+D+ D TGV + P A
Sbjct: 10 LYADGAARGNPGPAGAGAILLDDRGNVVAELTKFLGHA-TNNVAEYNGLILGLEEALRRGIRDIDVRLDSLLVVEQMCGRWKIKHPRLQPLARHAGELLAKFPRHEIR----HVPREENTRADALSNRAIDASDPDA----PTGVVAGPGGGA 153
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.590e-24 Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = 0
Query: 72 MWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWH--HVPRKLNVRADLLANIAMDSKS 202
+ FDGG RGNPG SGAG VI++DK +E+++G L + TNNEAEY +++ GL+ A +L I+ + V+GDS L++ Q+ G+++V + L HR A E+ T+ H+PR+ N RAD LANIAMDS S
Sbjct: 39 LQFDGGSRGNPGLSGAGMVIYNDKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVEL---RSAFSTFEISHIPREENGRADELANIAMDSAS 168
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A7V6DR52_9DELT (Ribonuclease HI family protein n=1 Tax=Desulfobacca acetoxidans TaxID=60893 RepID=A0A7V6DR52_9DELT) HSP 1 Score: 109 bits (272), Expect = 2.630e-24 Identity = 59/128 (46.09%), Postives = 84/128 (65.62%), Query Frame = 0
Query: 72 MWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMD 199
++ DG RGNPGP+GAGAV+FD ++ +YLGE TNN AEY+++ILGL A+KL +K + V DS+LV+QQ+ G +RV P L+ L QA +++++ H+ R LN AD LAN A+D
Sbjct: 4 LFVDGAARGNPGPAGAGAVLFDPAGEKRGEESRYLGE-TTNNVAEYQAIILGLELALKLGVKNLHVSADSLLVVQQLRGAYRVKTPHLLPLWSQAQKMLQEFDASVI-SHIDRSLNHEADALANQAID 129
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Match: A0A061RJK7_9CHLO (Ribonuclease h n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RJK7_9CHLO) HSP 1 Score: 111 bits (278), Expect = 6.350e-24 Identity = 86/232 (37.07%), Postives = 116/232 (50.00%), Query Frame = 0
Query: 9 YGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKF--------------------------KTPEEATDYANQVDDAGGALSPAP----AGWST----MWFDGGCRGNPGPSGAGAVIFDDKDKELYSGYKYLGEGKTNNEAEYESVILGLRAAVKLSIKQIVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEI 206
Y + +GR A V SWAE + GF GA F+ F +T E+ D +Q S AP A S+ + FDGG R NPGP+GAGAVI+ + L+ G+ +LG TNN AEY ++ GLR A L +K++ V+GDS LV++QM G++RV L LHR VV Q T+ HV R N AD LAN A+D++ E+
Sbjct: 7 YAVARGR-ASGVFSSWAECEKQVKGFKGALFKGFPNKHLAENFIMQNVASPCTPSRIGVSRTEHESPDRESQRPPKRHRKSEAPCEPGAALSSSVHLLRFDGGSRRNPGPAGAGAVIWAPSGECLWRGWLWLGVA-TNNVAEYTGLLFGLRKAAALGLKRLAVEGDSDLVMKQMNGEYRVKNTALRSLHRDCKVVVGQMD-HVTFRHVYRSTNHEADSLANRAIDTRESSEV 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig144.104.1 ID=prot_P-littoralis_Contig144.104.1|Name=mRNA_P-littoralis_Contig144.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=828bpback to top |